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Since the discovery of ionic liquids (ILs) as a new class of liquid that can survive in a vacuum at room temperature, they have been aimed at being characterized with vacuum analysis techniques and used in vacuum processes for the last two decades. In this review, our state-of-the-art of the vacuum engineering of ILs will be introduced. Beginning with nanoscale vacuum deposition of IL films and their thickness-dependent ionic conductivity, there are presented some new applications of the ellipsometry to in situ monitoring of the thickness of IL films and their glass transitions, and of the surface thermal fluctuation spectroscopy to investigation of the rheological properties of IL films. Furthermore, IL-VLS (vapor-liquid-solid) growth, a vacuum deposition via IL, has been found successful, enhancing the crystallinity of vacuum-deposited crystals and films, and sometimes controlling their surface morphology and polymorphs. Among recent applications of ILs are the use of metal ions-containing IL and thin film nano IL gel. The former is proposed as a low temperature evaporation source of metals, such as Ta, in vacuum deposition, while the latter is demonstrated to work as a gate electrolyte in an electric double layer organic transistor.

Comprehensive genomic profiling (CGP) is implemented to detect actionable gene aberrations and design matched therapies. Although malignant thoracic tumors are commonly detected through respiratory endoscopy, it is questionable whether the small specimens obtained thereof are sufficient for CGP. Therefore, this study aimed to investigate the suitability of respiratory endoscopy for sampling primary and metastatic thoracic tumors for CGP. Patients whose specimens were collected through respiratory endoscopy and assessed by pathologists to determine their suitability for CGP at our institution between June 2019 and May 2022 were reviewed retrospectively. The suitability of each procedure as a sampling technique for CGP and, in the cases actually analyzed, the distribution of the detected gene aberration were assessed. In total, 122 patients were eligible for analysis; the median age was 61 (range, 29–86) years, and 71 (58.2%) patients were male. Primary intrathoracic tumors were found in 91 (74.6%) cases, including 84 (68.9%) primary lung cancers; the remaining thoracic metastases of extrathoracic origin included various types. The suitability rates of specimens obtained using conventional bronchoscopy with and without cryobiopsy, endobronchial ultrasound‐guided transbronchial needle aspiration, and medical thoracoscopy were 82.8% (24/29), 70.4% (19/27), 72.9% (35/48), and 100% (18/18), respectively. Of the 96 cases judged suitable, 83 were subjected to CGP, and all but one were successfully analyzed. Finally, 47 (56.6%) patients had at least one actionable gene aberration and eight (9.6%) were treated with the corresponding targeted therapies. In conclusion, specimens obtained through respiratory endoscopy are suitable for CGP; medical thoracoscopy and cryobiopsy in conventional bronchoscopy are particularly useful.

Discourse parsing has been studied for decades. However, it still remains challenging to utilize discourse parsing for real-world applications because the parsing accuracy degrades significantly on out-of-domain text. In this paper, we report and discuss the effectiveness and limitations of bootstrapping methods for adapting modern BERT-based discourse dependency parsers to out-of-domain text without relying on additional human supervision. Specifically, we investigate self-training, co-training, tri-training, and asymmetric tri-training of graph-based and transition-based discourse dependency parsing models, as well as confidence measures and sample selection criteria in two adaptation scenarios: monologue adaptation between scientific disciplines and dialogue genre adaptation. We also release COVID-19 Discourse Dependency Treebank (COVID19-DTB), a new manually annotated resource for discourse dependency parsing of biomedical paper abstracts. The experimental results show that bootstrapping is significantly and consistently effective for unsupervised domain adaptation of discourse dependency parsing, but the low coverage of accurately predicted pseudo labels is a bottleneck for further improvement. We show that active learning can mitigate this limitation.

Background Cryobiopsy is an established technique that yields larger and higher-quality samples than does a forceps biopsy. However, it remains underutilised in the diagnosis of peripheral pulmonary lesions (PPLs), mainly because of difficulties in handling conventional cryoprobes. A recently introduced single-use cryoprobe with a smaller diameter and more flexibility than conventional ones may improve its diagnostic ability for PPLs. We conducted this prospective study to evaluate the feasibility of transbronchial cryobiopsy in the diagnoses of PPLs, using a new 1.7-mm cryoprobe. Methods The study included patients with PPLs less than 30 mm in diameter scheduled to undergo bronchoscopy. All the procedures were performed using a combination of virtual bronchoscopic navigation, radial endobronchial ultrasound (R-EBUS) and X-ray fluoroscopy, and all the samples were collected using the cryoprobe alone. Thereafter, we assessed the diagnostic outcomes and safety profiles. Results A total of 50 patients were enrolled and underwent cryobiopsy. The median lesion size was 20.8 mm (range, 8.2–29.6 mm), and the negative bronchus sign was seen in 34% of lesions. The diagnostic yield was 94% (95% confidence interval, 83.5–98.8%). A positive bronchus sign had a significantly higher diagnostic yield than did a negative bronchus sign (100% vs. 82.4%; P  = 0.035). The yield was achieved regardless of other variables, including lesion size, location, and R-EBUS findings. The major complications were mild and moderate bleeding in 28% and 62% of patients, respectively. Pneumothorax was identified in one patient. Conclusion Transbronchial cryobiopsy using the new 1.7-mm cryoprobe is a feasible procedure that has the potential to increase the diagnostic accuracy for PPLs. Trial registration Japan Registry of Clinical Trials, jRCT1032200065. Registered July 8 2020, https://jrct.niph.go.jp/en-latest-detail/jRCT1032200065

Background Endobronchial ultrasound-guided transbronchial cryobiopsy (EBUS-cryobiopsy) is advantageous for collecting larger specimens with minimal crushing; however, it has not been widely used for mediastinal tumors. Case presentation A 73-year-old woman with a history of left breast cancer underwent surgery followed by radiotherapy. Computed tomography showed a mass in the anterior mediastinum that was in extensive contact with the sternum on the ventral side and partly with the trachea on the dorsal side. Two computed tomography-guided needle biopsies (CTNBs) were performed on the mass; however, a definitive diagnosis was not made because of severe crush artifacts. Subsequently, we performed EBUS-cryobiopsy and safely obtained sufficient specimen volume with minimal crushing. The histopathological diagnosis was adenocarcinoma, with immunobiological features distinct from those of previous breast cancers. Her overall diagnosis was a rare tumor originating in the anterior mediastinum. Conclusions EBUS-cryobiopsy can be safely performed in narrow areas surrounded by major blood vessels, and the obtained specimens may be superior to CTNBs for histopathological diagnosis.

Proton pump inhibitors (PPIs) alter the composition of the intestinal microbiome, exacerbating indomethacin (IND)-induced small intestinal damage. Vonoprazan fumarate inhibits gastric acid secretion using a different mechanism from PPIs. We investigated the effects of both drugs on the intestinal microbiome and IND-induced small intestinal damage. We sought to clarify whether PPI-induced dysbiosis and worsening of the damage were due to a specific drug class effect of PPIs. Rabeprazole administration increased operational taxonomic unit numbers in the small intestines of C57BL/6 J mice, whereas the difference was not significant in the vonoprazan-treated group but exhibited a trend. Permutational multivariate analysis of variance of the unweighted UniFrac distances showed significant differences between vehicle- and vonoprazan- or rabeprazole-treated groups. L. johnsonii was the predominant microbial species, and the population ratio decreased after vonoprazan and rabeprazole administration. The vonoprazan- and rabeprazole-treated groups showed increased IND-induced damage. This high sensitivity to IND-induced damage was evaluated by transplantation with contents from the small intestine of mice treated with either vonoprazan or rabeprazole. Supplementation of L. johnsonii orally in mice treated with rabeprazole and vonoprazan prevented the increase in IND-induced small intestinal damage. In conclusion, both rabeprazole and vonoprazan aggravated NSAID-induced small intestinal injury by reducing the population of L. johnsonii in the small intestine via suppressing gastric acid secretion.

X-ray computed tomography (CT) is widely used in various fields for the non-destructive three-dimensional (3D) observation of internal structures within objects. However, biological cells are primarily composed of light elements such as oxygen and carbon, which have high X-ray transmittance. Consequently, conventional absorption contrast X-ray CT is unable to achieve fine 3D observations of such specimens. We hereby present a technique of novel contrast improvement, the slow freezing contrast improvement method. This method utilizes the aggregation of solutes during slow freezing of aqueous solutions to increase contrast. As plant cells are slowly cooled, intracellular fluid crystallizes, concentrating sugars in specific areas. This process allows for micron-scale visualization of cell structures without staining, using conventional absorption contrast X-ray CT. Experiments on slowly frozen fruits and formalin-fixed mouse organs using synchrotron-based cryo micro-X-ray CT produced high-resolution images of cellular structures. The ice crystal patterns formed within cells varied based on sugar concentration, suggesting potential for detecting sugar levels in individual cells. This method shows promise as a third approach for fine 3D observation of biological cells, complementing contrast agent and phase-contrast imaging techniques.

Recently-discovered lignocellulosic solvent, 8%(w/w) lithium chloride/dimethyl sulfoxide (LiCl/DMSO), was found to dissolve cellulose of varied crystal forms and degree of polymerization. Cellulose samples could be activated for dissolution by complexation with ethylenediamine (EDA), giving EDA contents of 20–23% (w/w) in the complex irrespective of the cellulose type. The cellulose solution gave well-resolved 13 C NMR spectrum, confirming molecular dispersion. Cellulose could be coagulated by ethanol to give translucent cellulose gels, which could be converted to highly porous aerogels via solvent exchange drying. Nitrogen adsorption analysis gave their specific surface areas of 190–213 m 2 /g, with typical mesopore sizes of 10–60 nm. Scanning electron microscopy revealed the network structure of aerogel composed of relatively straight fibril segments, approx. 20 nm wide and 100–1,000 nm long. X-ray diffraction showed that the material is poorly crystalline cellulose II.

Because a large number of Chinese characters are commonly used in both Japanese and Chinese, Chinese-speaking learners of Japanese as a second language (JSL) find it more challenging to learn Japanese functional expressions than to learn other Japanese vocabulary. To address this challenge, we have developed Jastudy, a computer-assisted language learning (CALL) system designed specifically for Chinese-speaking learners studying Japanese functional expressions. Given a Japanese sentence as an input, the system automatically detects Japanese functional expressions using a character-based bidirectional long short-term memory with a conditional random field (BiLSTM-CRF) model. The sentence is then segmented and the parts of speech (POS) are tagged (word segmentation and POS tagging) by a Japanese morphological analyzer, MeCab (http://taku910.github.io/mecab/), trained using a CRF model. In addition, the system provides JSL learners with appropriate example sentences that illustrate Japanese functional expressions. The system uses a ranking system, which gives easier sentences a higher rank, when selecting example sentences. A support vector machine for ranking (SVMRank) algorithm estimates the readability of example sentences, using Japanese-Chinese common words as an important feature. A k-means clustering algorithm is used to cluster example sentences that contain functional expressions with the same meanings, based on part-of-speech, conjugation form, and semantic attributes. Finally, to evaluate the usefulness of the system, we have conducted experiments and reported on a preliminary user study involving Chinese-speaking JSL learners.

This paper presents a novel concept of real-time catadioptric stereo tracking using a single ultrafast mirror-drive pan-tilt active vision system that can simultaneously switch between hundreds of different views in a second. By accelerating video-shooting, computation, and actuation at the millisecond-granularity level for time-division multithreaded processing in ultrafast gaze control, the active vision system can function virtually as two or more tracking cameras with different views. It enables a single active vision system to act as virtual left and right pan-tilt cameras that can simultaneously shoot a pair of stereo images for the same object to be observed at arbitrary viewpoints by switching the direction of the mirrors of the active vision system frame by frame. We developed a monocular galvano-mirror-based stereo tracking system that can switch between 500 different views in a second, and it functions as a catadioptric active stereo with left and right pan-tilt tracking cameras that can virtually capture 8-bit color 512 × 512 images each operating at 250 fps to mechanically track a fast-moving object with a sufficient parallax for accurate 3D measurement. Several tracking experiments for moving objects in 3D space are described to demonstrate the performance of our monocular stereo tracking system.