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result(s) for
"Tang, Yan"
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The genetics and clinical characteristics of children morphologically diagnosed as acute promyelocytic leukemia
2019
Acute promyelocytic leukemia (APL) is characterized by t(15;17)(q22;q21), resulting in a
PML-RARA
fusion that is the master driver of APL. A few cases that cannot be identified with
PML-RARA
by using conventional methods (karyotype analysis, FISH, and RT-PCR) involve abnormal promyelocytes that are fully in accordance with APL in morphology, cytochemistry, and immunophenotype. To explore the mechanisms involved in pathogenesis and recurrence of morphologically diagnosed APL, we performed comprehensive variant analysis by next-generation sequencing in 111 pediatric patients morphologically diagnosed as APL. Structural variant (SV) analysis in 120 DNA samples from both diagnosis and relapse stage identified 95 samples with
RARA
rearrangement (including 94 with
PML-RARA
and one with
NPM-RARA
) and two samples with
KMT2A
rearrangement. In the eligible 13 RNA samples without any
RARA
rearrangement at diagnosis, one case each with
CPSF6-RARG
,
NPM1-CCDC28A
, and
TBC1D15-RAB21
and two cases with a
TBL1XR1-RARB
fusion were discovered. These uncovered fusion genes strongly suggested their contributions to leukemogenesis as driver alternations and APL phenotype may arise by abnormalities of other members of the nuclear receptor superfamily involved in retinoid signaling (
RARB
or
RARG
) or even by mechanisms distinct from the formation of aberrant retinoid receptors. Single-nucleotide variant (SNV) analysis in 77 children (80 samples) with
RARA
rearrangement showed recurrent alternations of primary APL in
FLT3
,
WT1
,
USP9X
,
NRAS
, and
ARID1A
, with a strong potential for involvement in pathogenesis, and
WT1
as the only recurrently mutated gene in relapsed APL.
WT1
,
NPM1
,
NRAS
,
FLT3
, and
NSD1
were identified as recurrently mutated in 17 primary samples without
RARA
rearrangement and
WT1
,
NPM1
,
TP53
, and
RARA
as recurrently mutated in 9 relapsed samples. The survival of APL with
RARA
rearrangement is much better than without
RARA
rearrangement. Thus, patients morphologically diagnosed as APL that cannot be identified as having a
RARA
rearrangement are more reasonably classified as a subclass of AML other than APL, and individualized treatment should be considered according to the genetic abnormalities.
Journal Article
circMAN1A2 could serve as a novel serum biomarker for malignant tumors
by
Li, Gui‐Yuan
,
Guo, Can
,
Li, Yong
in
Biomarkers, Tumor - blood
,
Biomarkers, Tumor - genetics
,
circular RNA
2019
Novel diagnostic and prognostic biomarkers of cancers are needed to improve precision medicine. Circular RNAs act as important regulators in cancers at the transcriptional and posttranscriptional levels. The circular RNA circMAN1A2 is highly expressed in nasopharyngeal carcinoma according to our previous RNA sequencing data; however, the expression and functions of circMAN1A2 in cancers are still obscure. Therefore, in this study, we evaluated the expression of circMAN1A2 in the sera of patients with nasopharyngeal carcinoma and other malignant tumors and analyzed its correlations with clinical features and diagnostic values. The expression levels of circMAN1A2 were detected by quantitative real‐time PCR, and the correlations of clinical features with circMAN1A2 expression were analyzed by χ2 tests. Receiver operating characteristic curves were used to evaluate the clinical applications of circMAN1A2. The results showed that circMAN1A2 was upregulated in nasopharyngeal carcinoma, oral cancer, thyroid cancer, ovarian cancer, and lung cancer, with areas under the curves of 0.911, 0.779, 0.734, 0.694, and 0.645, respectively, indicating the good diagnostic value of circMAN1A2. Overall, our findings suggested that circMAN1A2 could be a serum biomarker for malignant tumors, providing important insights into diagnostic approaches for malignant tumors. Further studies are needed to elucidate the mechanisms of circMAN1A2 in the pathogenesis of cancer. We verified that circMAN1A2 was significantly upregulated in the sera of patients with NPC, oral cancer, thyroid cancer, ovarian cancer, and lung cancer and had good clinical diagnostic value. We speculate that circMAN1A2 could be a serum biomarker for malignant cancers and provide effective clues for the early diagnosis of malignant cancers.
Journal Article
Human organoids in basic research and clinical applications
2022
Organoids are three-dimensional (3D) miniature structures cultured in vitro produced from either human pluripotent stem cells (hPSCs) or adult stem cells (AdSCs) derived from healthy individuals or patients that recapitulate the cellular heterogeneity, structure, and functions of human organs. The advent of human 3D organoid systems is now possible to allow remarkably detailed observation of stem cell morphogens, maintenance and differentiation resemble primary tissues, enhancing the potential to study both human physiology and developmental stage. As they are similar to their original organs and carry human genetic information, organoids derived from patient hold great promise for biomedical research and preclinical drug testing and is currently used for personalized, regenerative medicine, gene repair and transplantation therapy. In recent decades, researchers have succeeded in generating various types of organoids mimicking in vivo organs. Herein, we provide an update on current in vitro differentiation technologies of brain, retinal, kidney, liver, lung, gastrointestinal, cardiac, vascularized and multi-lineage organoids, discuss the differences between PSC- and AdSC-derived organoids, summarize the potential applications of stem cell-derived organoids systems in the laboratory and clinic, and outline the current challenges for the application of organoids, which would deepen the understanding of mechanisms of human development and enhance further utility of organoids in basic research and clinical studies.
Journal Article
Histone Methyltransferase Enhancer of Zeste Homolog 2-Mediated ABCA1 Promoter DNA Methylation Contributes to the Progression of Atherosclerosis
2016
ATP-binding cassette transporter A1 (ABCA1) plays a critical role in maintaining cellular cholesterol homeostasis. The purpose of this study is to identify the molecular mechanism(s) underlying ABCA1 epigenetic modification and determine its potential impact on ABCA1 expression in macrophage-derived foam cell formation and atherosclerosis development. DNA methylation induced foam cell formation from macrophages and promoted atherosclerosis in apolipoprotein E-deficient (apoE-/-) mice. Bioinformatics analyses revealed a large CpG island (CGI) located in the promoter region of ABCA1. Histone methyltransferase enhancer of zeste homolog 2 (EZH2) downregulated ABCA1 mRNA and protein expression in THP-1 and RAW264.7 macrophage-derived foam cells. Pharmacological inhibition of DNA methyltransferase 1 (DNMT1) with 5-Aza-dC or knockdown of DNMT1 prevented the downregulation of macrophage ABCA1 expression, suggesting a role of DNA methylation in ABCA1 expression. Polycomb protein EZH2 induced DNMT1 expression and methyl-CpG-binding protein-2 (MeCP2) recruitment, and stimulated the binding of DNMT1 and MeCP2 to ABCA1 promoter, thereby promoting ABCA1 gene DNA methylation and atherosclerosis. Knockdown of DNMT1 inhibited EZH2-induced downregulation of ABCA1 in macrophages. Conversely, EZH2 overexpression stimulated DNMT1-induced ABCA1 gene promoter methylation and atherosclerosis. EZH2-induced downregulation of ABCA1 gene expression promotes foam cell formation and the development of atherosclerosis by DNA methylation of ABCA1 gene promoter.
Journal Article
The Ethical Examination of Human Embryonic Stem Cell Extraction Technology from the Perspective of Classical Confucianism’s Benevolence Toward People 仁民 (renmin) and Love for Things 愛物 (aiwu)
2025
The medical application of human embryonic stem cell technology has sparked ethical controversies, with the core issue being whether human embryos possess the same right to life as humans. According to classical Confucianism, humans are born from the essential Qi 精氣 (jingqi) of heaven and earth, making them the noblest beings in the world. Human embryos are the simple form of human life in its early stages, and as living human beings, they should therefore possess the legitimacy and justification to life. Confucianism advocates benevolence toward people 仁民 (renmin) and love for things 愛物 (aiwu) distinguishing between benevolence and love: benevolence toward people is benevolence, while love for all things is love. How people treat one another is how they should treat human embryos. Things exist to serve humanity; humans may utilise things but must not be treated as tools. Embryo life must not be harmed or sacrificed for the sake of saving human life. One should show benevolence to people and love to things. Therefore, the attitude toward human embryos should be “benevolence.” Human embryos inherently possess the potential to become human beings and do not require medical intervention to demonstrate their value. However, when humans extract and utilise stem cells from human embryos for their own benefit, this is tantamount to treating the embryos as things and reducing them to the status of things, thereby blurring the ethical boundaries between humans and things and disrupting the distinction between the recipients of benevolence and love. The extraction of human embryonic stem cells is ultimately an artificial technological achievement. Humans are not superior beings to heaven, and such practices must be confined within the moral framework of technological ethics and bioethics. Notwithstanding the technological advancements that have furnished humans with contemporary instruments, the necessity for a sense of awe for the heaven remains.
Journal Article
Superstretchable, yet stiff, fatigue-resistant ligament-like elastomers
2022
Ligaments are flexible and stiff tissues around joints to support body movements, showing superior toughness and fatigue-resistance. Such a combination of mechanical properties is rarely seen in synthetic elastomers because stretchability, stiffness, toughness, and fatigue resistance are seemingly incompatible in materials design. Here we resolve this long-standing mismatch through a hierarchical crosslinking design. The obtained elastomer can endure 30,000% stretch and exhibit a Young’s modulus of 18 MPa and toughness of 228 MJ m
−3
, outperforming all the reported synthetic elastomers. Furthermore, the fatigue threshold is as high as 2,682 J m
−2
, the same order of magnitude as the ligaments (~1,000 J m
−2
). We reveal that the dynamic double-crosslinking network composed of Li
+
-O interactions and PMMA nanoaggregates allows for a hierarchical energy dissipation, enabling the elastomers as artificial ligaments in soft robotics.
Stiffness, toughness, and fatigue resistance are seemingly incompatible in materials design. Here the authors demonstrate a hierarchical crosslinking strategy using lithium ion oxygen interactions and PMMA nanoaggregates to enable energy dissipation in the network, leading to stiff yet tough polymer materials.
Journal Article
Stainless steel corrosion via direct iron-to-microbe electron transfer by Geobacter species
2021
Microbial corrosion of iron-based materials is a substantial economic problem. A mechanistic understanding is required to develop mitigation strategies, but previous mechanistic studies have been limited to investigations with relatively pure Fe(0), which is not a common structural material. We report here that the mechanism for microbial corrosion of stainless steel, the metal of choice for many actual applications, can be significantly different from that for Fe(0). Although H
2
is often an intermediary electron carrier between the metal and microbes during Fe(0) corrosion, we found that H
2
is not abiotically produced from stainless steel, making this corrosion mechanism unlikely.
Geobacter sulfurreducens
and
Geobacter metallireducens,
electrotrophs that are known to directly accept electrons from other microbes or electrodes, extracted electrons from stainless steel via direct iron-to-microbe electron transfer. Genetic modification to prevent H
2
consumption did not negatively impact on stainless steel corrosion. Corrosion was inhibited when genes for outer-surface cytochromes that are key electrical contacts were deleted. These results indicate that a common model of microbial Fe(0) corrosion by hydrogenase-positive microbes, in which H
2
serves as an intermediary electron carrier between the metal surface and the microbe, may not apply to the microbial corrosion of stainless steel. However, direct iron-to-microbe electron transfer is a feasible route for stainless steel corrosion.
Journal Article
Delivery of nitric oxide with a nanocarrier promotes tumour vessel normalization and potentiates anti-cancer therapies
2019
Abnormal tumour vasculature has a significant impact on tumour progression and response to therapy. Nitric oxide (NO) regulates angiogenesis and maintains vascular homeostasis and, thus, can be delivered to normalize tumour vasculature. However, a NO-delivery system with a prolonged half-life and a sustained release mechanism is currently lacking. Here we report the development of NanoNO, a nanoscale carrier that enables sustained NO release to efficiently deliver NO into hepatocellular carcinoma. Low-dose NanoNO normalizes tumour vessels and improves the delivery and effectiveness of chemotherapeutics and tumour necrosis factor-related, apoptosis-inducing, ligand-based therapy in both primary tumours and metastases. Furthermore, low-dose NanoNO reprogrammes the immunosuppressive tumour microenvironment toward an immunostimulatory phenotype, thereby improving the efficacy of cancer vaccine immunotherapy. Our findings demonstrate the ability of nanoscale NO delivery to efficiently reprogramme tumour vasculature and immune microenvironments to overcome resistance to cancer therapy, resulting in a therapeutic benefit.
Journal Article
Human cerebral organoids establish subcortical projections in the mouse brain after transplantation
2021
Numerous studies have used human pluripotent stem cell-derived cerebral organoids to elucidate the mystery of human brain development and model neurological diseases in vitro, but the potential for grafted organoid-based therapy in vivo remains unknown. Here, we optimized a culturing protocol capable of efficiently generating small human cerebral organoids. After transplantation into the mouse medial prefrontal cortex, the grafted human cerebral organoids survived and extended projections over 4.5 mm in length to basal brain regions within 1 month. The transplanted cerebral organoids generated human glutamatergic neurons that acquired electrophysiological maturity in the mouse brain. Importantly, the grafted human cerebral organoids functionally integrated into pre-existing neural circuits by forming bidirectional synaptic connections with the mouse host neurons. Furthermore, compared to control mice, the mice transplanted with cerebral organoids showed an increase in freezing time in response to auditory conditioned stimuli, suggesting the potentiation of the startle fear response. Our study showed that subcortical projections can be established by microtransplantation and may provide crucial insights into the therapeutic potential of human cerebral organoids for neurological diseases.
Journal Article
Standardized assays for determining the catalytic activity and kinetics of peroxidase-like nanozymes
by
Fan, Kelong
,
George Fu Gao
,
Duan, Demin
in
Assaying
,
Biological activity
,
Biological properties
2018
Nanozymes are nanomaterials exhibiting intrinsic enzyme-like characteristics that have increasingly attracted attention, owing to their high catalytic activity, low cost and high stability. This combination of properties has enabled a broad spectrum of applications, ranging from biological detection assays to disease diagnosis and biomedicine development. Since the intrinsic peroxidase activity of Fe3O4 nanoparticles (NPs) was first reported in 2007, >40 types of nanozymes have been reported that possess peroxidase-, oxidase-, haloperoxidase- or superoxide dismutase–like catalytic activities. Given the complex interdependence of the physicochemical properties and catalytic characteristics of nanozymes, it is important to establish a standard by which the catalytic activities and kinetics of various nanozymes can be quantitatively compared and that will benefit the development of nanozyme-based detection and diagnostic technologies. Here, we first present a protocol for measuring and defining the catalytic activity units and kinetics for peroxidase nanozymes, the most widely used type of nanozyme. In addition, we describe the detailed experimental procedures for a typical nanozyme strip–based biological detection test and demonstrate that nanozyme-based detection is repeatable and reliable when guided by the presented nanozyme catalytic standard. The catalytic activity and kinetics assays for a nanozyme can be performed within 4 h.
Journal Article