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Animals such as raccoon dogs, mink and muskrats are farmed for fur and are sometimes used as food or medicinal products 1 , 2 , yet they are also potential reservoirs of emerging pathogens 3 . Here we performed single-sample metatranscriptomic sequencing of internal tissues from 461 individual fur animals that were found dead due to disease. We characterized 125 virus species, including 36 that were novel and 39 at potentially high risk of cross-species transmission, including zoonotic spillover. Notably, we identified seven species of coronaviruses, expanding their known host range, and documented the cross-species transmission of a novel canine respiratory coronavirus to raccoon dogs and of bat HKU5-like coronaviruses to mink, present at a high abundance in lung tissues. Three subtypes of influenza A virus—H1N2, H5N6 and H6N2—were detected in the lungs of guinea pig, mink and muskrat, respectively. Multiple known zoonotic viruses, such as Japanese encephalitis virus and mammalian orthoreovirus 4 , 5 , were detected in guinea pigs. Raccoon dogs and mink carried the highest number of potentially high-risk viruses, while viruses from the Coronaviridae , Paramyxoviridae and Sedoreoviridae families commonly infected multiple hosts. These data also reveal potential virus transmission between farmed animals and wild animals, and from humans to farmed animals, indicating that fur farming represents an important transmission hub for viral zoonoses. Fur farming represents an important hub of cross-species transmission for viral zoonoses.

Researchers have long suspected that these animals are a reservoir of viruses that can jump to people, says Alice Hughes, a conservation biologist at the University of Hong Kong. [...]a popular fur animal, the raccoon dog (Nyctereutesprocyonoides), could have played a part in bringing the virus that causes severe acute respiratory syndrome to people in 2003 (ref. 2). Of these animals, 164 came from four species farmed exclusively for fur: mink (Neogale vison), red fox ( Vulpes vulpes), Arctic fox ( Vulpes lagopus) and raccoon dog. Most notably, they found in mink an HKU5-like coronavirus related to viruses that have so far been identified only in bats - evidence that fur farms can act as a highway for viruses lurking in wild animals to get to people.

Cryptosporidium spp. are common parasitic pathogens causing diarrhea in humans and various animals. Fur animals are widely farmed in Shandong Province, China, but the prevalence and genetic identity of Cryptosporidium spp. in them are unclear. In this study, 1,211 fecal samples were collected from 602 minks, 310 raccoon dogs and 299 foxes on two farms in Shandong and analyzed for Cryptosporidium spp. by nested PCR and sequence analyses of the small subunit rRNA gene. The overall infection rate of Cryptosporidium spp. was 31.5% (381/1,211), with a higher infection rate in raccoon dogs (37.7%, 117/310) than in foxes (32.4%, 97/299) and minks (27.7%, 167/602). By age, the highest infection rates of Cryptosporidium spp. were observed in raccoon dogs of 1-2 months, minks of 5-6 months, and foxes of > 12 months. Three Cryptosporidium species and genotypes were detected, including C. canis ( n = 279), C. meleagridis ( n = 65) and Cryptosporidium mink genotype ( n = 37). Among the three major host species, raccoon dogs were infected with C. canis only ( n = 117), while foxes were infected with both C. canis ( n = 32) and C. meleagridis ( n = 65), and minks with C. canis ( n = 130) and Cryptosporidium mink genotype ( n = 37). Subtyping of C. canis by sequence analysis of the 60 kDa glycoprotein gene identified eight subtypes. They belonged to two known subtype families, XXa and XXd, and two novel subtype families XXf and XXg, with host adaptation at the subtype family level. Notably, C. canis from foxes was genetically distant from those in other hosts. Further subtyping analysis identified three subtypes (IIIeA21G2R1, IIIeA19G2R1 and IIIeA17G2R1) of C. meleagridis and two novel subtype families Xf and Xg of the Cryptosporidium mink genotype. The presence of zoonotic C. canis subtypes in raccoon dogs and C. meleagridis subtypes in foxes suggests that these fur animals might be potential reservoirs for human-pathogenic Cryptosporidium spp.

Enterocytozoon bieneusi is the most common species of microsporidia found both in humans and animals. Farmed animals, particularly closely associated to humans, may play an important role of zoonotic reservoir in transmitting this disease to humans. The fur industry is a major economic component in some parts of China. To understand the prevalence, genotype variety and zoonotic risk of E. bieneusi in farmed foxes and raccoon dogs, two species of fur animals, fecal specimens of 110 blue foxes and 49 raccoon dogs from Heilongjiang and Jilin provinces in China were examined by internal transcribed spacer (ITS)-based PCR. E. bieneusi was detected in 16.4% (18/110) blue foxes and 4.1% (2/49) raccoon dogs. Altogether, four genotypes of E. bieneusi were identified, including two known genotypes D (n = 13) and EbpC (n = 5), and two novel genotypes named as CHN-F1 (n = 1) in a fox and CHN-R1 (n = 1) in a raccoon dog. Phylogenetic analysis revealed that all the four genotypes were the members of zoonotic group 1. Genotypes D and EbpC were found in humans previously. The findings of zoonotic genotypes of E. bieneusi in the foxes and raccoon dogs suggest these animals infected with E. bieneusi may pose a threat to human health.

Context Parapatric sister species are ideal for tests of ecological interactions. Pacific ( Martes caurina ) and American pine ( M. americana ) martens are economically and culturally valuable furbearers that hybridize in the north-central Rocky Mountains. Despite preliminary evidence of biased introgression, the hybrid zone has been geographically stable for 70 years, but interspecific ecological interactions have yet to be examined in detail. Objectives We test whether ecological interactions may influence the outcome of hybridization in this system. To that end, we estimate the fundamental niche of each species and gauge how suitability landscapes change when the two species are in contact. Methods We genotyped > 400 martens from the Rocky Mountain hybrid zone to diagnose individuals to species-level and identify putative hybrids. We then built range-wide ecological niche models for each species, excluding individuals in the hybrid zone, to approximate their respective fundamental niches. Those models were projected into the hybrid zone and compared with niche models trained on individuals within the hybrid zone to assess how niche dynamics change when the species are in sympatry. Results The fundamental niche of each species differed significantly, while the hybrid zone was equally suitable for both. Niches of each species based on models built within the hybrid zone showed that Pacific martens utilized significantly less suitable habitat than expected based on their range-wide fundamental niche, suggesting that species interactions shape local hybridization. We detected few admixed individuals (12%), with no evidence of directional (sex or species) biases. Interstate-90 further acts as a major dispersal barrier. Conclusions North American martens are currently managed as a single species by some state agencies, yet significant ecological and genetic differences indicate they should be managed separately. The observed ecological displacement of Pacific martens by American pine martens may partially explain the mixed success of historical, mixed-species wildlife translocations and cautions such translocations in the future. Landscape-scale consideration of ecological dynamics, in addition to molecular compatibility, will be essential to the success of future translocations.

Trapping data have a long and rich history of use in monitoring furbearer populations in North America but understanding the influences of variation in trapper harvest is important. Many factors besides abundance can cause variation in trapper harvest, including socioeconomics, weather, and motivation. The relationships between these extrinsic factors and trapper harvest may change temporally, which may obscure the causal understanding of variation in trapper harvest. We tested for changes in the relationships between pelt price and trapper numbers, and pelt price and harvest per trapper for raccoons (Procyon lotor) in Illinois, USA, from 1976–2018 while controlling for other socioeconomic (gasoline price, unemployment) and weather (temp, snow depth) factors. The annual raccoon harvest showed no clear trend, whereas the number of raccoon trappers declined markedly from approximately 1976–1990 in conjunction with pelt prices, after which the number of trappers remained relatively stable and were not significantly affected by pelt price. In contrast, harvest per trapper increased markedly during the 1990s and showed a significant negative relationship with pelt price pre-1990 but a positive relationship post-1990. We propose that declines in pelt prices resulted in a loss of less experienced or economically incentivized trappers, whereas contemporary trappers may continue trapping primarily for non-economic reasons. Our study highlights the potential for using non-linear relationships between trapper harvest data and socioeconomic covariates to help understand the influences of temporal variation in trapper harvest data.

Bobcats (Lynx rufus) have been increasing in abundance in the northeast United States despite a corresponding trend of increased anthropogenic land uses. Inhabiting areas of high human land use can affect stress levels, and hence cortisol titers, for wildlife species by increasing frequency of human interaction and altering habitats. In turn, increased cortisol levels can have negative effects at the individual and population level including decreased immune function, slowed growth and tissue repair, reduced reproductive capacity, and nutritional deficiencies. We quantified cortisol in bobcats across New Hampshire and Vermont, USA, using hair samples, then explored associations between hair cortisol and various organismal, land use, land cover, and climatic variables at 2 different spatial scales. Hair cortisol differed by season and bobcat mass. On average, cortisol levels were higher in fall than in spring, and larger bobcats had lower cortisol levels. Anthropogenic land uses—especially residential and agricultural uses—were the most important predictors of hair cortisol at the town scale (x̄ area = 93 km²). At a larger scale (Wildlife Management Units; x̄ area = 1,256 km²), temperature and precipitation were better predictors of hair cortisol, suggesting that extreme weather may have significant effects on bobcat population dynamics. Our results highlight the importance of landscape composition and local conditions in the sustainable management of furbearer populations.

Aquatic apex predators are vulnerable to environmental contaminants due to biomagnification. North American river otter ( Lontra canadensis ) populations should be closely monitored across their range due to point and nonpoint pollution sources. Nonetheless, no information exists on environmental contaminants in the North Carolina otter population. Metals and metalloids occur naturally across the landscape, are essential for cellular function, and become toxic when concentrated unnaturally. We conducted our study across the three Furbearer Management Units (FMU) and 14 river basins of North Carolina. We determined the concentrations of arsenic, cadmium, calcium, cobalt, copper, iron, lead, magnesium, manganese, mercury, molybdenum, selenium, thallium, and zinc in liver and kidney samples from 317 otters harvested from 2009 to 2016. Arsenic, lead, and thallium samples were tested at levels below the limit of detection. With the exception of cadmium, we detected all other elements at higher levels in the liver compared with the kidney. Specifically, cadmium, cobalt, copper, iron, magnesium, manganese, mercury, molybdenum, and zinc levels differed by tissue type analyzed. Most element concentrations remained stable or increased with otter age. We detected higher levels of mercury and selenium in the Lower Pee Dee and Cape Fear river basins. River basins within the Mountain FMU were higher in cadmium, copper, iron, lead, and zinc, whereas the Coastal Plain FMU was lower in cobalt and manganese. None of the elements occurred at toxic levels. Our research establishes baseline concentration levels for North Carolina, which will benefit future monitoring efforts and provide insight into future changes in the otter population.

Humans have used wild furbearers for various purposes for thousands of years. Today, furbearers are sustainably used by the public for their pelts, leather, bones, glands, meat, or other purposes. In North America, contemporary harvest of furbearers has evolved along with trap technologies and societal concerns, and is now highly regulated and more closely coupled with harvest analysis and population monitoring. Traps and regulated trapping programs provide personal or cultural rewards that can also support conservation, and can assist with advancing ecological knowledge through research, protecting endangered species, restoring populations or habitats, protecting personal property, and enhancing public health and safety. However, animal welfare and trap selectivity remain important topics for furbearer management in North America, as they have for more than a century. A related international challenge to modern furbearer management came with the Wild Fur Regulation by the European Union, which passed in 1991. This regulation prohibited use of foothold traps in many European countries and the importation of furs and manufactured fur products to Europe from countries that allowed use of foothold traps or trapping methods that did not meet internationally agreed-upon humane trapping standards. To address existing national concerns and requirements of the Wild Fur Regulation, the United States and European Union signed a non-binding bilateral understanding that included a commitment by the United States to evaluate trap performance and advance the use of improved traps through development of best management practices (BMPs) for trapping. Our testing followed internationally accepted restraining-trap standards for quantifying injuries and capture efficiency, and we established BMP pass-fail thresholds for these metrics. We also quantified furbearer selectivity, and qualitatively assessed practicality and user safety for each trap, yielding overall species-specific performance profiles for individual trap models. We present performance data for 84 models of restraining traps (6 cage traps, 68 foothold traps, 9 foot-encapsulating traps, and 1 power-activated footsnare) on 19 furbearing species, or 231 trap-species combinations. We conducted post-mortem examinations on 8,566 furbearers captured by trappers. Of the 231 trap model-species combinations tested, we had sufficient data to evaluate 173 combinations, of which about 59% met all BMP criteria. Pooling species, cage traps produced the lowest average injury score (common injuries included tooth breakage), with minimal differences across other trap types; species-specific patterns were generally similar, with the exception of raccoons (Procyon lotor) for which foot-encapsulating traps performed better than other foot-restraining trap types. Padded-jaw foothold traps performed better than standard-jaw models for many species, though often similar to and occasionally worse than offset- or laminated-jaw models. Most traps we tested had high capture efficiency; only 5 (3%) failed BMP standards strictly because of poor efficiency. Average furbearer selectivity was high across all trap types we evaluated and was lowest for footsnares (88%) and highest for foot-encapsulating traps (99%). Mortality from trap-related injury in restraining traps we tested was very rare for furbearers (0.5% of animals). In over 230,000 trap-nights across a 21-year period, no individuals of a threatened or endangered species were captured. Of 9,589 total captures, 11% were non-furbearers, of which 83% were alive upon trap inspection; nearly all non-furbearer mortalities were birds, rabbits, or squirrels. Approximately 2% of total captures were feral or free-ranging dogs (Canis familiaris), of which none died or were deemed in need of veterinary care by either our technicians or the owners (if located). Similarly, 3% of total captures were feral or free-ranging cats (Felis catus); 2 were dead, and although locating potential owners was often impossible, none of the remaining cats were deemed in need of veterinary care by technicians or owners. Our results show that furbearer selectivity was high for all trap types evaluated, mortality or significant injury was very rare for domestic (or feral) animals, and the most potential for mortality or injury of non-furbearers was with smaller animals, a majority of which were squirrels and rabbits. Our results suggest that injury scores for a given trap-species combination are unlikely to vary significantly across states or regions of the United States, provided similar methods are employed. Our data also suggest that taxonomic affiliation and body-size groupings are correlated with injury scores, presumably through morphological, physiological, or behavioral adaptations or responses that influence injury potential during restraint; higher injury scores in foot-restraining trap types were more likely in smaller or more dexterous species, whereas injury scores were typically lowest for the felids we evaluated. For some species (e.g., American badger [Taxidea taxus], bobcat [Lynx rufus]), most restraining traps we tested met BMP standards, whereas few restraining traps we tested met standards for other species (e.g., muskrat [Ondatra zibethicus], striped skunk [Mephitis mephitis]). Comparison of our results with survey information collected during 2015 on trap use in the United States indicates that approximately 75% of all target furbearers harvested were taken in BMP-compliant traps, with another 10% taken in traps yet to be tested on that species. Future trap testing and development should focus on commonly used traps not yet tested on a species, species for which few passing traps currently pass BMP criteria, and trap models and modifications most likely to minimize trap injuries given a species morphology, physiology, and behavior. Outreach efforts should focus on general BMP awareness, discouraging use of traps that fail BMP standards for a given species, and public outreach on trapping. Restraining (and other) traps have evolved substantially in recent decades and offer numerous benefits to individuals, conservation, and society. However, continuing to address societal concerns remains a critical component of modern regulated trapping and furbearer management. Published trapping BMPs are regularly updated online and may include additional approved restraining and killing traps that were evaluated as part of testing by Canada. We will periodically update the trap performance tables and figures we presented and make them available online at the Association of Fish and Wildlife Agencies website. Published 2020. This article is a U.S. Government work and is in the public domain in the USA. Wildlife Monographs published by Wiley Periodicals LLC on behalf of The Wildlife Society. Los seres humanos han utilizado a los animales silvestres de peletería para diversos fines durante miles de años. Hoy en día, el público utiliza de manera sostenible los animales de peletería para pieles, cueros, huesos, glándulas, carne u otros fines. En América del Norte, la cosecha contemporánea de animales de peletería, ha evolucionado junto con las tecnologías de trampas y las preocupaciones sociales, y ahora está altamente regulada y más estrechamente relacionada con el análisis de la cosecha y el monitoreo de la población. Las trampas y los programas de captura regulada brindan recompensas personales o culturales que también pueden apoyar la conservación y pueden ayudar a promover el conocimiento ecológico a través de la investigación, la protección de especies en peligro de extinción, la restauración de poblaciones o hábitats, la protección de la propiedad personal y la mejora de la salud y la seguridad públicas. Sin embargo, el bienestar animal y la selectividad de las trampas siguen siendo temas importantes para el manejo de los animales de peletería en América del Norte, como lo han sido durante más de un siglo. Un desafío internacional relacionado con la gestión moderna de los animales de peletería llegó con el Reglamento de Pieles Silvestres de la Unión Europea, que se aprobó en 1991. Este reglamento prohibía el uso de trampas que sujetan las patas (más específicamente pie y metatarso o metacarpo) de los animales en muchos países europeos y la importación de pieles y productos de piel manufacturados a Europa desde países que permitían uso de trampas que sujetan las patas o métodos de captura que no cumplieron con los estándares de captura humanitaria acordados internacionalmente. Para abordar las preocupaciones y los requisitos nacionales existentes del Reglamento Sobre Pieles Silvestres, los Estados Unidos y la Unión Europea firmaron un acuerdo bilateral, no vinculante, que incluía un compromiso de los Estados Unidos para evaluar el desempeño de las trampas y promover el uso de trampas mejoradas mediante el desarrollo de mejores prácticas de manejo (MPM) para la captura. Nuestras pruebas siguieron los estándares aceptados internacionalmente de trampas para sujetar patas (o también llamadas de restricción o contención) para cuantificar las lesiones y la eficiencia de captura, y establecimos umbrales de MPM de aceptable y no aceptable para estos parámetros. También cuantificamos la selectividad sobre los animales de peletería y evaluamos cualitativamente la practicidad y la seguridad del usuario para cada trampa, lo que arrojó perfiles generales de rendimiento sobre especies específicas para modelos de trampa individuales. Presentamos datos de rendimiento para 84 modelos de trampas de contención (6 trampas de jaula, 68 trampas para sujetar patas, 9 trampas de encapsulación de patas y 1 lazada de pata activada mecánicamente) en 19 especies de peletería, o 231 combinaciones de trampas y especies. Realizamos exámenes post mortem en 8,566 animales de peletería capturados por tramperos. De las 231 combinaciones de modelos de trampas y especies probadas, tuvimos datos suf

Cumulative impacts of anthropogenic landscape change must be considered when managing and conserving wildlife habitat. Across the central-interior of British Columbia, Canada, industrial activities are altering the habitat of furbearer species. This region has witnessed unprecedented levels of anthropogenic landscape change following rapid development in a number of resource sectors, particularly forestry. Our objective was to create expert-based habitat models for three furbearer species: fisher (Pekania pennanti), Canada lynx (Lynx canadensis), and American marten (Martes americana) and quantify habitat change for those species. We recruited 10 biologist and 10 trapper experts and then used the analytical hierarchy process to elicit expert knowledge of habitat variables important to each species. We applied the models to reference landscapes (i.e., registered traplines) in two distinct study areas and then quantified the change in habitat availability from 1990 to 2013. There was strong agreement between expert groups in the choice of habitat variables and associated scores. Where anthropogenic impacts had increased considerably over the study period, the habitat models showed substantial declines in habitat availability for each focal species (78% decline in optimal fisher habitat, 83% decline in optimal lynx habitat, and 79% decline in optimal marten habitat). For those traplines with relatively little forest harvesting, the habitat models showed no substantial change in the availability of habitat over time. The results suggest that habitat for these three furbearer species declined significantly as a result of the cumulative impacts of forest harvesting. Results of this study illustrate the utility of expert knowledge for understanding large-scale patterns of habitat change over long time periods.