Journal Article

Genetic factors affect the susceptibility to bacterial infections in diabetes

Järvinen, Asko, Antikainen, Anni A., Forsblom, Carol, Sandholm, Niina, Toppila, Iiro, Groop, Leif, Groop, Per-Henrik, Mansour-Aly, Dina, Lehto, Markku, Prasad, Rashmi, Simonsen, Johan R., Käräjämäki, Annemari, Ahlqvist, Emma, Harjutsalo, Valma, Tuomi, Tiinamaija

2021

Overview

Diabetes increases the risk of bacterial infections. We investigated whether common genetic variants associate with infection susceptibility in Finnish diabetic individuals. We performed genome-wide association studies and pathway analysis for bacterial infection frequency in Finnish adult diabetic individuals (FinnDiane Study; N = 5092, Diabetes Registry Vaasa; N = 4247) using national register data on antibiotic prescription purchases. Replication analyses were performed in a Swedish diabetic population (ANDIS; N = 9602) and in a Finnish non-diabetic population (FinnGen; N = 159,166). Genome-wide data indicated moderate but significant narrow-sense heritability for infection susceptibility (h 2  = 16%, P = 0.02). Variants on chromosome 2 were associated with reduced infection susceptibility (rs62192851, P = 2.23 × 10 –7 ). Homozygotic carriers of the rs62192851 effect allele (N = 44) had a 37% lower median annual antibiotic purchase rate, compared to homozygotic carriers of the reference allele (N = 4231): 0.38 [IQR 0.22–0.90] and 0.60 [0.30–1.20] respectively, P = 0.01). Variants rs6727834 and rs10188087, in linkage disequilibrium with rs62192851, replicated in the FinnGen-cohort (P < 0.05), but no variants replicated in the ANDIS-cohort. Pathway analysis suggested the IRAK1 mediated NF-κB activation through IKK complex recruitment-pathway to be a mediator of the phenotype. Common genetic variants on chromosome 2 may associate with reduced risk of bacterial infections in Finnish individuals with diabetes.

• Publisher: Nature Publishing Group UK,Nature Publishing Group,Nature Portfolio
• Subject: 631/208/205 / 631/250/255 / Alleles / Antibiotics / Bacteria / Bacterial diseases / Bacterial infections / Chromosome 2 / Clinical Medicine / Diabetes / Diabetes mellitus / Endocrinology and Diabetes / Endokrinologi och diabetes / Genetic diversity / Genetic factors / Genetic variance / Genome-wide association studies / Genomes / Heritability / Humanities and Social Sciences / Infections / Infectious Medicine / Infektionsmedicin / IRAK protein / Klinisk medicin / Linkage disequilibrium / Medical and Health Sciences / Medicin och hälsovetenskap / multidisciplinary / NF-κB protein / Phenotypes / Science / Science (multidisciplinary) / Susceptibility