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7
result(s) for
"Šušnjar, Jana"
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Aedes koreicus, a vector on the rise: Pan-European genetic patterns, mitochondrial and draft genome sequencing
2022
The mosquito Aedes koreicus (Edwards, 1917) is a recent invader on the European continent that was introduced to several new places since its first detection in 2008. Compared to other exotic Aedes mosquitoes with public health significance that invaded Europe during the last decades, this species' biology, behavior, and dispersal patterns were poorly investigated to date. To understand the species' population relationships and dispersal patterns within Europe, a fragment of the cytochrome oxidase I (COI or COX1) gene was sequenced from 130 mosquitoes, collected from five countries where the species has been introduced and/or established. Oxford Nanopore and Illumina sequencing techniques were combined to generate the first complete nuclear and mitochondrial genomic sequences of Ae. koreicus from the European region. The complete genome of Ae. koreicus is 879 Mb. COI haplotype analyses identified five major groups (altogether 31 different haplotypes) and revealed a large-scale dispersal pattern between European Ae. koreicus populations. Continuous admixture of populations from Belgium, Italy, and Hungary was highlighted, additionally, haplotype diversity and clustering indicate a separation of German sequences from other populations, pointing to an independent introduction of Ae. koreicus to Europe. Finally, a genetic expansion signal was identified, suggesting the species might be present in more locations than currently detected. Our results highlight the importance of genetic research of invasive mosquitoes to understand general dispersal patterns, reveal main dispersal routes and form the baseline of future mitigation actions. The first complete genomic sequence also provides a significant leap in the general understanding of this species, opening the possibility for future genome-related studies, such as the detection of 'Single Nucleotide Polymorphism' markers. Considering its public health importance, it is crucial to further investigate the species' population genetic dynamic, including a larger sampling and additional genomic markers.
Journal Article
First record of Aedes koreicus (Diptera, Culicidae) in Slovenia
by
Šušnjar, Jana
,
Ivović, Vladimir
,
Kalan, Katja
in
Aedes
,
Aedes - classification
,
Aedes koreicus
2017
The first record of
Aedes koreicus
was made in the village of Lovrenc na Dravskem Polju, north-eastern part of the country
.
The discovery of
Ae. koreicus
in various continental European countries motivated us to revise samples of the collected
Aedes japonicus japonicus
. We found
Ae. koreicus
in samples from 2013, where the larvae were misidentified as
Ae. j. japonicus
. The species was identified morphologically and molecularly. The first discovery of
Ae. koreicus
advocates an urgent need for a nationwide mosquito surveillance programme.
Journal Article
Pilot Study of Invasive Mosquito Species Control in Selected Slovenian Municipalities
by
Jugovic, Jure
,
Šušnjar, Jana
,
Ivović, Vladimir
in
Aedes albopictus
,
Aquatain AMF
,
aquatain amftm
2022
To reduce the population of the Asian tiger mosquito Aedes albopictus (Skuse, 1894) (Diptera: Culicidae), a mosquito control campaign was organized by five Slovenian municipalities in 2020. The campaign focused on the application of Aquatain AMFTM in public water containers. The main objective of our study was to test the efficacy of the agent by directly testing the water drains for mosquito larvae and monitoring the density of the mosquito population. The drains were inspected before and after the application of the product from May to September. A water sample was taken from the drains using a dipper. For mosquito monitoring, the number of mosquito eggs and adult mosquitoes was counted from June to October.
Up to two weeks after the application of the product, we observed the lethal effect of Aquatain on mosquito larvae, pupae and adult mosquitoes. After rainfall, the product was washed away and the live mosquitoes were sampled in the inspected water drains. The average number of eggs collected per site was twice as high in the area without mosquito control as in the threated locations. Nevertheless, we assessed the mosquito control campaign as partially successful, as mosquito abundance was still high in the locations with mosquito control. However, we believe that this is a good starting point and that mosquito control should be continued in the future together with the citizen education campaign.
Journal Article
Detection, identification and genotyping of Borrelia spp. in ticks of Coastal-Karst and Littoral-Inner Carniola regions in Slovenia
2023
The density and spread of tick vector species have increased throughout Europe in the last 30 years, leading to an increase of Lyme borreliosis cases, including in Slovenia. The aim of this study was to isolate Borrelia strains and determine the prevalence of B. burgdorferi sensu lato and B. miyamotoi in adults of Ixodes ricinus (Linnaeus) collected in 2019 in the two regions of the country (Coastal-Karst and Littoral-Inner Carniola) by cultivation and PCR. We isolated B. burgdorferi s.l. by culture method in 28/559 (5%) ticks from both regions. Culture-negative samples (531/559, i.e., 95%) were additionally tested by real-time PCR. In 155/531 (29.2%) PCR-positive samples, a fragment of flaB or glpQ was amplified and further sequenced to identify species of the Borrelia. Using both methods, cultivation and PCR, Borrelia spp. prevalence was 32.7% in the Coastal-Karst region and 33.0% in the Littoral-Inner Carniola region. Genotyping of the Borrelia spp. isolates revealed that 17/28 (60%) were B. garinii subtype Mlg2. Of all tick samples tested for B. miyamotoi 8/398 (2%) were PCR positive. Based on previous studies in these regions, we had expected more ticks to be infected with B. afzelii, but genotyping revealed that B. garinii was the most abundant.
Journal Article
Aedes koreicus, a vector on the rise: Pan-European genetic patterns, mitochondrial and draft genome sequencing
2022
Background The mosquito Aedes koreicus (Edwards, 1917) is a recent invader on the European continent that was introduced to several new places since its first detection in 2008. Compared to other exotic Aedes mosquitoes with public health significance that invaded Europe during the last decades, this species’ biology, behavior, and dispersal patterns were poorly investigated to date. Methodology/Principal findings To understand the species’ population relationships and dispersal patterns within Europe, a fragment of the cytochrome oxidase I (COI or COX1) gene was sequenced from 130 mosquitoes, collected from five countries where the species has been introduced and/or established. Oxford Nanopore and Illumina sequencing techniques were combined to generate the first complete nuclear and mitochondrial genomic sequences of Ae. koreicus from the European region. The complete genome of Ae. koreicus is 879 Mb. COI haplotype analyses identified five major groups (altogether 31 different haplotypes) and revealed a large-scale dispersal pattern between European Ae. koreicus populations. Continuous admixture of populations from Belgium, Italy, and Hungary was highlighted, additionally, haplotype diversity and clustering indicate a separation of German sequences from other populations, pointing to an independent introduction of Ae. koreicus to Europe. Finally, a genetic expansion signal was identified, suggesting the species might be present in more locations than currently detected. Conclusions/Significance Our results highlight the importance of genetic research of invasive mosquitoes to understand general dispersal patterns, reveal main dispersal routes and form the baseline of future mitigation actions. The first complete genomic sequence also provides a significant leap in the general understanding of this species, opening the possibility for future genome-related studies, such as the detection of ‘Single Nucleotide Polymorphism’ markers. Considering its public health importance, it is crucial to further investigate the species’ population genetic dynamic, including a larger sampling and additional genomic markers.
Journal Article
Aedes koreicus, a vector on the rise: pan-European genetic patterns, mitochondrial and draft genome sequencing
2021
Background: The mosquito Aedes koreicus (Edwards, 1917) is a recent invader on the European continent that was introduced to several new places since its first detection in 2008. Compared to other exotic Aedes mosquitoes with public health significance that invaded Europe during the last decades, this species biology, behavior, and dispersal patterns were poorly investigated to date. Methodology/Principal Findings: To understand the species population relationships and dispersal patterns within Europe, a fragment of the COI gene was sequenced from 130 mosquitoes, collected from five countries where the species has been introduced and/or established. Oxford Nanopore and Illumina sequencing techniques were combined to generate the first complete nuclear and mitochondrial genomic sequences of Ae. koreicus from the European region. The complete genome of Ae. koreicus is 879 Mb. COI haplotype analyses identified five major groups (altogether 31 different haplotypes) and revealed a large-scale dispersal pattern between European Ae. koreicus populations. Continuous admixture of populations from Belgium, Italy, and Hungary was highlighted, additionally, haplotype diversity and clustering clearly indicate a separation of German sequences from other populations, pointing to an independent introduction of Ae. koreicus to Europe. Finally, a genetic expansion signal was identified, suggesting the species might be present in more locations than currently detected. Conclusions/Significance: Our results highlight the importance of genetic research of invasive mosquitoes to understand general dispersal patterns, reveal main dispersal routes and form the baseline of future mitigation actions. The first complete genomic sequence also provides a significant leap in the general understanding of this species, opening the possibility for future genome-related studies, such as the detection of Single Nucleotide Polymorphism markers. Considering its public health importance, it is crucial to further investigate the species population genetic dynamic, including a larger sampling and additional genomic markers. Competing Interest Statement The authors have declared no competing interest.