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"Abney, Mark R"
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Comparison of transcriptomes of an orthotospovirus vector and non-vector thrips species
by
Shrestha, Anita
,
Champagne, Donald E.
,
Srinivasan, Rajagopalbabu
in
Adenosylmethionine
,
Animals
,
Annotations
2019
Thrips transmit one of the most devastating plant viruses worldwide-tomato spotted wilt tospovirus (TSWV). Tomato spotted wilt tospovirus is a type species in the genus Orthotospovirus and family Tospoviridae. Although there are more than 7,000 thrips species, only nine thrips species are known to transmit TSWV. In this study, we investigated the molecular factors that could affect thrips ability to transmit TSWV. We assembled transcriptomes of a vector, Frankliniella fusca [Hinds], and a non-vector, Frankliniella tritici [Fitch], and performed qualitative comparisons of contigs associated with virus reception, virus infection, and innate immunity. Annotations of F. fusca and F. tritici contigs revealed slight differences across biological process and molecular functional groups. Comparison of virus cell surface receptors revealed that homologs of integrin were present in both species. However, homologs of another receptor, heperan sulfate, were present in F. fusca alone. Contigs associated with virus replication were identified in both species, but a contig involved in inhibition of virus replication (radical s-adenosylmethionine) was only present in the non-vector, F. tritici. Additionally, some differences in immune signaling pathways were identified between vector and non-vector thrips. Detailed investigations are necessary to functionally characterize these differences between vector and non-vector thrips and assess their relevance in orthotospovirus transmission.
Journal Article
Resistance to Thrips in Peanut and Implications for Management of Thrips and Thrips-Transmitted Orthotospoviruses in Peanut
by
Srinivasan, Rajagopalbabu
,
Culbreath, Albert K.
,
Tallury, Shyam
in
administrative management
,
adulthood
,
Antibiosis
2018
Thrips are major pests of peanut (
L.) worldwide, and they serve as vectors of devastating orthotospoviruses such as
(TSWV) and
(GBNV). A tremendous effort has been devoted to developing peanut cultivars with resistance to orthotospoviruses. Consequently, cultivars with moderate field resistance to viruses exist, but not much is known about host resistance to thrips. Integrating host plant resistance to thrips in peanut could suppress thrips feeding damage and reduce virus transmission, will decrease insecticide usage, and enhance sustainability in the production system. This review focuses on details of thrips resistance in peanut and identifies future directions for incorporating thrips resistance in peanut cultivars. Research on thrips-host interactions in peanut is predominantly limited to field evaluations of feeding damage, though, laboratory studies have revealed that peanut cultivars could differentially affect thrips feeding and thrips biology. Many runner type cultivars, field resistant to TSWV, representing diverse pedigrees evaluated against thrips in the greenhouse revealed that thrips preferred some cultivars over others, suggesting that antixenosis \"non-preference\" could contribute to thrips resistance in peanut. In other crops, morphological traits such as leaf architecture and waxiness and spectral reflectance have been associated with thrips non-preference. It is not clear if foliar morphological traits in peanut are associated with reduced preference or non-preference of thrips and need to be evaluated. Besides thrips non-preference, thrips larval survival to adulthood and median developmental time were negatively affected in some peanut cultivars and in a diploid peanut species
(Hoehne) and its hybrids with a Virginia type cultivar, indicating that antibiosis (negative effects on biology) could also be a factor influencing thrips resistance in peanut. Available field resistance to orthotospoviruses in peanut is not complete, and cultivars can suffer substantial yield loss under high thrips and virus pressure. Integrating thrips resistance with available virus resistance would be ideal to limit losses. A discussion of modern technologies such as transgenic resistance, marker assisted selection and RNA interference, and future directions that could be undertaken to integrate resistance to thrips and to orthotospoviruses in peanut cultivars is included in this article.
Journal Article
Evaluation of Wild Peanut Species and Their Allotetraploids for Resistance against Thrips and Thrips-Transmitted Tomato Spotted Wilt Orthotospovirus (TSWV)
by
Catto, Michael
,
Hopkins, Mark
,
Leal-Bertioli, Soraya
in
Accumulation
,
allotetraploidy
,
Antibiosis
2023
Thrips-transmitted tomato spotted wilt orthotospovirus (TSWV) causes spotted wilt disease in peanut (Arachis hypogaea L.) and limits yield. Breeding programs have been developing TSWV-resistant cultivars, but availability of sources of resistance against TSWV in cultivated germplasm is extremely limited. Diploid wild Arachis species can serve as important sources of resistance, and despite ploidy barriers (cultivated peanut is tetraploid), their usage in breeding programs is now possible because of the knowledge and development of induced interspecific allotetraploid hybrids. This study screened 10 wild diploid Arachis and six induced allotetraploid genotypes via thrips-mediated TSWV transmission assays and thrips’ feeding assays in the greenhouse. Three parameters were evaluated: percent TSWV infection, virus accumulation, and temporal severity of thrips feeding injury. Results indicated that the diploid A. stenosperma accession V10309 and its derivative-induced allotetraploid ValSten1 had the lowest TSWV infection incidences among the evaluated genotypes. Allotetraploid BatDur1 had the lowest thrips-inflicted damage at each week post thrips release, while diploid A. batizocoi accession K9484 and A. duranensis accession V14167 had reduced feeding damage one week post thrips release, and diploids A. valida accession GK30011 and A. batizocoi had reduced feeding damage three weeks post thrips releasethan the others. Overall, plausible TSWV resistance in diploid species and their allotetraploid hybrids was characterized by reduced percent TSWV infection, virus accumulation, and feeding severity. Furthermore, a few diploids and tetraploid hybrids displayed antibiosis against thrips. These results document evidence for resistance against TSWV and thrips in wild diploid Arachis species and peanut-compatible-induced allotetraploids.
Journal Article
Defense-Related Gene Expression Following an Orthotospovirus Infection Is Influenced by Host Resistance in Arachis hypogaea
by
Shrestha, Anita
,
Champagne, Donald E.
,
Srinivasan, Rajagopalbabu
in
Arachis - genetics
,
Arachis - virology
,
Arachis hypogaea
2021
Planting resistant cultivars is the most effective tactic to manage the thrips-transmitted tomato spotted wilt orthotospovirus (TSWV) in peanut plants. However, molecular mechanisms conferring resistance to TSWV in resistant cultivars are unknown. In this study, transcriptomes of TSWV-susceptible (SunOleic 97R) and field-resistant (Tifguard) peanut cultivars with and without TSWV infection were assembled and differentially expressed genes (DEGs) were compared. There were 4605 and 2579 significant DEGs in SunOleic 97R and Tifguard, respectively. Despite the lower number of DEGs in Tifguard, an increased proportion of defense-related genes were upregulated in Tifguard than in the susceptible cultivar. Examples included disease resistance (R) proteins, leucine-rich repeats, stilbene synthase, dicer, and calmodulin. Pathway analysis revealed the increased downregulation of genes associated with defense and photosynthesis in the susceptible cultivar rather than in the resistant cultivar. These results suggest that essential physiological functions were less perturbed in the resistant cultivar than in the susceptible cultivar and that the defense response following TSWV infection was more robust in the resistant cultivar than in the susceptible cultivar.
Journal Article
Discrepancies in Serology-Based and Nucleic Acid-Based Detection and Quantitation of Tomato Spotted Wilt Orthotospovirus in Leaf and Root Tissues from Symptomatic and Asymptomatic Peanut Plants
by
Chen, Yi-Ju
,
Srinivasan, Rajagopalbabu
,
Bag, Sudeep
in
Arachis hypogaea L
,
Asymptomatic
,
Bioaccumulation
2021
Thrips-transmitted tomato spotted wilt orthotospovirus (TSWV) causes spotted wilt disease in peanuts. A serological test (DAS-ELISA) is often used to detect TSWV in peanut leaf samples. However, in a few studies, DAS-ELISA detected more TSWV infection in root than leaf samples. It was not clear if the increased detection was due to increased TSWV accumulation in root tissue or merely an overestimation. Additionally, it was unclear if TSWV detection in asymptomatic plants would be affected by the detection technique. TSWV infection in leaf and root tissue from symptomatic and asymptomatic plants was compared via DAS-ELISA, RT-PCR, and RT-qPCR. TSWV incidence did not vary by DAS-ELISA, RT-PCR, and RT-qPCR in leaf and root samples of symptomatic plants or in leaf samples of asymptomatic plants. In contrast, significantly more TSWV infection and virus load were detected in root samples of asymptomatic plants via DAS-ELISA than other techniques suggesting that DAS-ELISA overestimated TSWV incidence and load. TSWV loads from symptomatic plants via RT-qPCR were higher in leaf than root samples, while TSWV loads in leaf and root samples from asymptomatic plants were not different but were lower than those in symptomatic plants. These findings suggested that peanut tissue type and detection technique could affect accurate TSWV detection and/or quantitation.
Journal Article
Impact of Host Resistance to Tomato Spotted Wilt Orthotospovirus in Peanut Cultivars on Virus Population Genetics and Thrips Fitness
by
Srinivasan, Rajagopalbabu
,
Culbreath, Albert K.
,
Bag, Sudeep
in
Clustering
,
Cultivars
,
Disease resistance
2021
Thrips-transmitted tomato spotted wilt orthotospovirus (TSWV) is a major constraint to peanut production in the southeastern United States. Peanut cultivars with resistance to TSWV have been widely used for over twenty years. Intensive usage of resistant cultivars has raised concerns about possible selection pressure against TSWV and a likelihood of resistance breakdown. Population genetics of TSWV isolates collected from cultivars with varying levels of TSWV resistance was investigated using five TSWV genes. Phylogenetic trees of genes did not indicate host resistance-based clustering of TSWV isolates. Genetic variation in TSWV isolates and neutrality tests suggested recent population expansion. Mutation and purifying selection seem to be the major forces driving TSWV evolution. Positive selection was found in N and RdRp genes but was not influenced by TSWV resistance. Population differentiation occurred between isolates collected from 1998 and 2010 and from 2016 to 2019 but not between isolates from susceptible and resistant cultivars. Evaluated TSWV-resistant cultivars differed, albeit not substantially, in their susceptibility to thrips. Thrips oviposition was reduced, and development was delayed in some cultivars. Overall, no evidence was found to support exertion of selection pressure on TSWV by host resistance in peanut cultivars, and some cultivars differentially affected thrips fitness than others.
Journal Article
Species Composition, Temporal Abundance and Distribution of Insect Captures Inside and Outside Commercial Peanut Shelling Facilities
by
Toews, Michael D.
,
Moore, Patricia J.
,
Abney, Mark R.
in
cadra cautella
,
food processing
,
lasioderma serricorne
2020
Insect populations were studied within two commercial peanut shelling facilities located in the southeastern United States. Commercially available pheromone/kairomone-baited dome traps and pheromone-baited flight traps were deployed throughout processing and shipping portions of the shelling plants and serviced weekly over one year. Lasioderma serricorne, Tribolium castaneum, Typhaea stercorea, Carpophilus spp., Plodia interpunctella and Cadra cautella were the most common captures across locations. Lasioderma serricorne made up 87% and 88% of all captures in dome traps in plants one and two, respectively. While L. serricorne was not captured during the winter months in flight traps, it was captured with near 100% frequency in dome traps, suggesting that populations persisted throughout the year inside the facilities. Tribolium castaneum populations were active year round. Across insect species and trap type, temperature was a significant covariate for explaining variation in insect counts. After accounting for the effect of temperature, there were always more insects captured in the processing portions of the facilities compared to the shipping areas. A negative linear relationship was observed between captures of L. serricorne and T. castaneum and trap distance from in-shell peanuts entering the shelling facilities. Conversely, fungivores were more evenly distributed throughout all parts of the shelling plants. These data suggest that management efforts should be focused where in-shell peanuts enter to reduce breeding and harborage sites for grain feeding insects.
Journal Article
Landscape factors affect relative abundance of rootworm species and pod injury in Georgia peanuts
by
Skipper, April L.
,
Sutton, Kemper L.
,
Fair, Conor G.
in
Agricultural Irrigation
,
Animals
,
Arachis
2024
The southern corn rootworm, Diabrotica undecimpunctata howardi Barber, is native to the US where it is a pest of peanut, Arachis hypogaea.The banded cucumber beetle, Diabrotica balteata LeConte, is native to the neotropics, but its range has expanded and currently includes most of the US peanut production area.The purpose of this study was to: (i) define seasonal variation in adult rootworm populations in peanut fields, and (ii) determine the effect(s) of proximity to a putative early season host (i.e., corn, Zea mays) and the presence of irrigation on rootworm infestation and pod injury in peanut. Seasonal abundance of adult rootworms in commercial peanut fields in Georgia was monitored in 2021 and 2022 using plant volatile lures attached to yellow sticky traps.Traps were located at 45, 90, and 180 m from the field edge in irrigated and nonirrigated peanut fields with and without a corn border.Two peaks in abundance were observed for both species in each year. Though peak abundance for the two species occurred nearly simultaneously, D. balteata was more abundant than D. u. howardi. Beetle abundance was highest in fields bordered by corn, but presence of irrigation was not as important for D. balteata as it was for D. u. howardi. Pod injury was greater in fields bordered by corn in both years, but there was no difference in pod injury between irrigated and nonirrigated fields.The number of beetles captured and incidence of pod injury within a field did not differ with distance from the field border.
Journal Article
Observing the Effect of Soil-Applied Insecticides on Wireworm (Coleoptera: Elateridae) Behavior and Mortality Using Radiographic Imaging
2018
Radiographic imaging was used to study corn wireworm, Melanotus communis (Gyllenhal) (Coleoptera: Elateridae), behavior in the soil relative to Irish potato, Solanum tuberosum L. (Solanales: Solanaceae), placed above a barrier of insecticide-treated soil. Behavioral response to three insecticides was evaluated by 1) calculating the percentage of wireworms that breached the zone of insecticide-treated soil, 2) comparing the variability in the mean distance between each wireworm and the center of the tuber in each arena compartment, 3) comparing the cumulative distance of wireworm travel, and 4) comparing incidence and severity of wireworm-inflicted tuber injury. The percentage of wireworms that breached the insecticide zone was significantly lower in the bifenthrin treatment than the untreated check, but not different from clothianidin or fipronil. Limited difference between treatments in relation to the cumulative distance traveled was observed where bifenthrin inhibited travel distance more than other insecticides tested. No difference in variability of movement in relation to the food source was observed between treatments. Bifenthrin and fipronil treatments resulted in the greatest reduction in wireworm injury incidence and severity compared to the untreated check. While bifenthrin suppressed wireworm movement and feeding more than other insecticides tested, exposure to fipronil resulted in higher wireworm mortality at all sample dates.
Journal Article
Frankliniella fusca (Thysanoptera: Thripidae), The Vector of Tomato Spotted Wilt Orthotospovirus Infecting Peanut in the Southeastern United States
by
Gautam, Saurabh
,
LaTora, A Gabrielle
,
Chen, Yi-Ju
in
Agricultural practices
,
Biological control
,
Chlorosis
2022
The tobacco thrips, Frankliniella fusca Hinds, is a phytophagous pest and vector of orthotospoviruses in many crops around the world. F. fusca causes direct feeding injury to peanut plants, resulting in leaf chlorosis and curling, and yield loss. Adults and larvae also transmit the economically important tomato spotted wilt orthotospovirus (TSWV) in all peanut market types grown in the U.S. TSWV infection causes spotted wilt disease, a plant disease characterized by chlorosis, stunting, and death. From 1996 to 2006, spotted wilt disease resulted in an estimated U.S.$140 million in annual peanut production losses in the U.S. At present, a thorough documentation of F. fusca’s impacts on the U.S. peanut production system is not available. Here, we describe the morphology, life cycle, and biology of F. fusca and provide images of immature life stages. Feeding injury characteristics and TSWV transmission in peanuts are also discussed. Currently, F. fusca and TSWV are managed in peanut with a combination of tactics, including prophylactic insecticide applications and TSWV-resistant cultivars. However, standardized scouting protocols and economic thresholds for F. fusca are not yet available. Very few biological control agents have been evaluated for use against F. fusca, and few studies have quantified the contributions of native natural enemies. More research into natural enemies’ contributions to F. fusca management and the mechanisms underlying TSWV-resistance in peanut could help inform and diversify integrated pest management programs.
Journal Article