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"An, Ru"
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A Small-Sample Classification Strategy for Extracting Fractional Cover of Native Grass Species and Noxious Weeds in the Alpine Grasslands
2024
The fractional cover of native grass species (NGS) and noxious weeds (NW) provides a more comprehensive understanding of grassland health in the alpine grasslands. However, coverage extraction of NGS and NW from satellite hyperspectral imagery can be challenging due to the small spectral and spatial feature difference, insufficient training samples, and the lack of effective fractional cover extraction methods. In this research, firstly, a feature optimization method is proposed to optimize the difference feature between NGS and NW. Secondly, a spectral–spatial constrained re-clustering training sample extension method (SSCTSE) is proposed to increase the number of training samples. Thirdly, a composite three-kernel SVM method (CTK-SVM) is developed to produce fractional cover maps of NGS and NW. The experimental results show that (1) the feature optimization method is effective in preserving the spectral and spatial difference features while eliminating invalid features; (2) the SSCTSE algorithm is capable of significantly increasing the number of training samples; (3) the fractional cover maps of NGS and NW are produced with the CTK-SVM method with overall accuracies of approximately 65%, and the RMSEs of NGS and NW are approximately 16% and 11%, respectively. The results provide a foundation for the fractional cover extraction of different grass species in alpine grasslands based on satellite hyperspectral imagery.
Journal Article
Effects of surface modification on heavy metal adsorption performance and stability of peanut shell and its extracts of cellulose, lignin, and hemicellulose
2020
Effects of surface modification by carboxyl group on Pb
2+
adsorption performances and stability of peanut shell and its extracts (cellulose, lignin, and hemicellulose) were investigated. Stability of the biosorbents was measured by determining organic compound release amount (TOC). Results showed that adsorption capacity of peanut shell and the extract was poor and stability of them was not good enough. Amount of organic compound released from the unmodified sorbents followed the order: cellulose > lignin > peanut shell > hemicellulose. Hemicellulose was the main organic compound release resource for the raw peanut shell. Due to the poor stability of the raw materials, peanut and its extract could not be used directly in the practical waste water treatment. After modification, adsorption capacity of peanut shell, cellulose, lignin, and hemicellulose increased by 4- to 6-folds. Stability of the modified sorbents also increased significantly, and TOC determined for the modified peanut shell, cellulose, and hemicellulose was lower than 4.0 mg L
−1
in the optimum pH range from 4.0 to 6.0 even using for 30 days, which was lower than the drinking water standard in China. Modified peanut shell and its extract except for lignin could be used safely in pH ranged from 4.0 to 6.0. Surface modification could improve the adsorption performances and stability of the biosorbents.
Journal Article
Simultaneous removal of cationic and anionic dyes from aqueous solution by double functional groups modified bagasse
2020
Double functional groups modified bagasse (DFMBs), a series of new zwitterionic groups of carboxyl and amine modified adsorbents, were prepared through grafting tetraethylenepentamine (TEPA) onto the pyromellitic dianhydride (PMDA) modified bagasse using the DCC/DMAP method. DFMBs' ability to simultaneously remove basic magenta (BM, cationic dye) and Congo red (CR, anionic dye) from aqueous solution in single and binary dye systems was investigated. FTIR spectra and Zeta potential analysis results showed that PMDA and TEPA were successfully grafted onto the surface of bagasse, and the ratio of the amount of carboxyl groups and amine groups was controlled by the addition of a dosage of TEPA. Adsorption results showed that adsorption capacities of DFMBs for BM decreased while that for CR increased with the increase of the amount of TEPA in both single and binary dye systems, and BM or CR was absorbed on the modified biosorbents was mainly through electrostatic attraction and hydrogen bond. The adsorption for BM and CR could reach equilibrium within 300 min, both processes were fitted well by the pseudo-second-order kinetic model. The cationic and anionic dyes removal experiment in the binary system showed that DMFBs could be chosen as adsorbents to treat wastewater containing different ratios of cationic and anionic dyes.
Journal Article
Mapping the Spatial Distribution of Noxious Weed Species with Time-Series Data in Degraded Grasslands in the Three-River Headwaters Region, China
2025
Noxious weeds (NWs) are increasingly recognized as a significant threat to the native alpine grassland ecosystems of the Qinghai–Tibetan Plateau (QTP). However, large-scale quantification of their continuous fractional cover remains challenging. This study proposes a pixel-level estimation framework utilizing time-series Sentinel-2 imagery. A Dynamic Mask Non-Stationary Transformer (DMNST) model was developed and trained using multi-temporal multispectral data to map the spatial distribution of NWs in the Three-River Headwaters Region. The model was calibrated and validated using field data collected from 170 plots (1530 quadrats). The results demonstrated that both the dynamic masking module and the non-stationary normalization significantly enhanced the prediction accuracy and robustness, particularly when applied jointly. The model performance varied across different combinations of spectral bands and temporal inputs, with the optimal configurations achieving a test R2 of 0.770, MSE of 0.009, and RMSE of 0.096. These findings underscore the critical role of the input configuration and architectural enhancements in accurately modeling the fractional cover of NWs. This study confirms the applicability of Sentinel-2 time-series imagery for modeling the continuous fractional cover of NWs and provides a scalable tool for invasive species monitoring and ecological risk assessment in alpine ecosystems.
Journal Article
Phylogeography and paleodistribution models of a widespread birch (Betula platyphylla Suk.) across East Asia: Multiple refugia, multidirectional expansion, and heterogeneous genetic pattern
2019
Widespread tree species cover large geographical areas and play important roles in various vegetation types. Understanding how these species responded to historical climatic changes is important for understanding community assembly mechanisms with evolutionary and conservation implications. However, the location of refugial areas and postglacial history of widespread trees in East Asia remain poorly known. We combined microsatellite data (63 populations, 1756 individuals) and ecological niche modeling to examine the range‐wide population diversity, genetic structure, and historical demography of a pioneer tree species, Asian white birch (Betula platyphylla Suk.) across East Asia. We found a north‐to‐south trend of declining genetic diversity and five clusters, corresponding to geographical regions. Different clusters were inferred to have diverged through Pleistocene climatic oscillations and have different expansion routes, leading to genetic admixture in some populations. Ecological niche models indicated that the distribution of B. platyphylla during the last glacial maximum still had a large latitude span with slight shifts toward southeast, and northern populations had more variable distribution ranges than those in the south during later climatic oscillations. Our results reflect the relatively stable distribution through the last glacial–interglacial cycles and recent multidirectional expansion of B. platyphylla, providing new hypotheses for the response pattern of widespread tree species to climate change. The gradual genetic pattern from northeast to southwest and alternative distribution dynamics possibly resulted from environmental differences caused by latitude and topographic heterogeneity. We recovered for the first time a detailed demographic history of Betula platyphylla across the range of the species. Multiple refugia with different distribution dynamics were detected in both northern and southern parts of the range. In contrast to previous studies, we found multidirectional recolonization routes and an increase in genetic diversity with latitude.
Journal Article
Mapping the Continuous Cover of Invasive Noxious Weed Species Using Sentinel-2 Imagery and a Novel Convolutional Neural Regression Network
2024
Invasive noxious weed species (INWS) are typical poisonous plants and forbs that are considered an increasing threat to the native alpine grassland ecosystems in the Qinghai–Tibetan Plateau (QTP). Accurate knowledge of the continuous cover of INWS across complex alpine grassland ecosystems over a large scale is required for their control and management. However, the cooccurrence of INWS and native grass species results in highly heterogeneous grass communities and generates mixed pixels detected by remote sensors, which causes uncertainty in classification. The continuous coverage of INWS at the pixel level has not yet been achieved. In this study, objective 1 was to test the capability of Senginel-2 imagery at estimating continuous INWS cover across complex alpine grasslands over a large scale and objective 2 was to assess the performance of the state-of-the-art convolutional neural network-based regression (CNNR) model in estimating continuous INWS cover. Therefore, a novel CNNR model and a random forest regression (RFR) model were evaluated for estimating INWS continuous cover using Sentinel-2 imagery. INWS continuous cover was estimated directly from Sentinel-2 imagery with an R2 ranging from 0.88 to 0.93 using the CNNR model. The RFR model combined with multiple features had a comparable accuracy, which was slightly lower than that of the CNNR model, with an R2 of approximately 0.85. Twelve green band-, red-edge band-, and near-infrared band-related features had important contributions to the RFR model. Our results demonstrate that the CNNR model performs well when estimating INWS continuous cover directly from Sentinel-2 imagery, and the RFR model combined with multiple features derived from the Sentinel-2 imager can also be used for INWS continuous cover mapping. Sentinel-2 imagery is suitable for mapping continuous INWS cover across complex alpine grasslands over a large scale. Our research provides information for the advanced mapping of the continuous cover of invasive species across complex grassland ecosystems or, more widely, terrestrial ecosystems over large spatial areas using remote sensors such as Sentinel-2.
Journal Article
Newborn screening for Morquio disease and other lysosomal storage diseases: results from the 8-plex assay for 70,000 newborns
2020
Background
The necessity of early treatment for lysosomal storage diseases (LSDs) has triggered the development of newborn screening for LSDs in recent years. Here we report the first 70,000 newborns screened for Mucopolysaccharidosis (MPS) type 4A (Morquio syndrome) and other LSDs by an 8-plex assay including the original 4-plex LSD screening tandem mass spectrometry (MS/MS) assay for Pompe disease, Fabry disease, Gaucher disease, and MPS I disease.
Methods
The additional reaction for MPS II, MPS 3B, MPS 4A, and MPS 6 enzymes was performed separately from the 4-plex reaction. The two reactions were quenched and extracted, then combined before carrying out a single 2-min UPLC-MS/MS analysis.
Results
From Mar. 2018 to Apr. 2019, 73,743 newborns were screened with the 8-plex LSD screening assay. The 8-plex assay revealed a better analytical precision than the previous 4-plex assay possibly because the 8-plex was carried out using UPLC-MS/MS. Six newborns were found to have low MPS-4A enzyme (N-acetylgalactosamine-6-sulfatase) activity and biallelic
GALNS
pathogenic mutations
in trans
; these patients are presumably affected with MPS4A, making an incidence of one in 12,291 (95% confident interval (CI): 5633-26,817). One mutation, c.857C > T (p.T286 M) of the
GALNS
gene, accounted 5 of the 12 mutated alleles. These newborns had immature vertebral bodies at 1 month of age, and one case was treated with elosulfase alfa 2 mg/kg/week starting from 4 months of age. Among other MPSs screened, one case of MPS I, 3 cases of MPS II, and 3 cases of MPS 3B were detected. One case of mucolipidosis type III was also diagnosed. In conjunction with another 9 patients of Pompe disease, Gaucher disease, and classical Fabry disease, making an incidence of LSDs as one in 3206 newborns (95% CI: 2137 - 4811). The one with infantile-onset Pompe disease and the one with Gaucher disease were treated since the age of 8 days and 41 days respectively.
Conclusions
Routine newborn screening of MPS 4A and other LSDs were made possible by the 8-plex LSD screening assay. However, detailed phenotype prediction and the time to start treatment will need further elucidation.
Journal Article
Characterization and Leaching Kinetics of Rare Earth Elements from Phosphogypsum in Hydrochloric Acid
2022
The characterization and leaching mechanism of REEs from phosphogypsum (PG) in HCl was studied in-depth. REEs contained in the PG were 208 ppm, of which Y, La, Ce, and Nd were the four most abundant elements. The modes of occurrence of rare earth elements (REEs) in the PG were quantified using the sequential chemical extraction (SCE) method. Among the five REE occurrence species, the metal oxide form accounted for the largest proportion, followed by the residual, organic matter, and ion-exchangeable fractions, and REEs bound to carbonates were the least. From the comparison of the distributions of REEs and calcium in different occurrence states, it can be determined that REEs contained in the PG were mainly present in the residue state (existed in the gypsum lattice) and the metal oxide state (easily leached). The leaching results show that the suitable leaching conditions were acid concentration of 1.65 mol/L, S/L ratio of 1/10, and reaction temperature of 60 °C. At the condition, the maximum leaching efficiency for ∑REE was 65.6%, of which the yttrium leaching rate was the highest and reached 73.8%. Importantly, A new kinetic equation based on the cylindrical shrinking core model (SCM) was deduced and could well describe REE leaching process from PG. The apparent activation energy for ∑REE leaching was determined to be 20.65 kJ·mol−1.
Journal Article
Substantial Reduction in Vegetation Photosynthesis Capacity during Compound Droughts in the Three-River Headwaters Region, China
2023
Solar-induced chlorophyll fluorescence (SIF) is a reliable proxy for vegetative photosynthesis and is commonly used to characterize responses to drought. However, there is limited research regarding the use of multiple high-resolution SIF datasets to analyze reactions to atmospheric drought and soil drought, especially within mountain grassland ecosystems. In this study, we used three types of high-spatial-resolution SIF datasets (0.05°), coupled with meteorological and soil moisture datasets, to investigate the characteristics of atmospheric, soil, and compound drought types. We centered this investigation on the years spanning 2001–2020 in the Three-River Headwaters Region (TRHR). Our findings indicate that the TRHR experienced a combination of atmospheric drying and soil wetting due to increases in the standardized saturation vapor pressure deficit index (SVPDI) and standardized soil moisture index (SSMI). In the growing season, atmospheric drought was mainly distributed in the southern and eastern parts of the TRHR (reaching 1.7 months/year), while soil drought mainly occurred in the eastern parts of the TRHR (reaching 2 months/year). Compound drought tended to occur in the southern and eastern parts of the TRHR and trended upward during 2001–2020. All three SIF datasets consistently revealed robust photosynthetic activity in the southern and eastern parts of the TRHR, with SIF values generally exceeding 0.2 mW· m−2·nm−1·sr−1. Overall, the rise in SIF between 2001 and 2020 corresponds to enhanced greening of TRHR vegetation. Vegetation photosynthesis was found to be limited in July, attributable to a high vapor pressure deficit and low soil moisture. In the response of CSIF data to a drought event, compound drought (SVPDI ≥ 1 and SSMI ≤ −1) caused a decline of up to 14.52% in SIF across the source region of the Yellow River (eastern TRHR), while individual atmospheric drought and soil drought events caused decreases of only 5.06% and 8.88%, respectively. The additional effect of SIF produced by compound drought outweighed that of atmospheric drought as opposed to soil drought, suggesting that soil moisture predominantly governs vegetation growth in the TRHR. The reduction in vegetation photosynthesis capacity commonly occurring in July, characterized by a simultaneously high vapor pressure deficit and low soil moisture, was more pronounced in Yellow River’s source region as well. Compound drought conditions more significantly reduce SIF compared to singular drought events. Soil drought evidently played a greater role in vegetation growth stress than atmospheric drought in the TRHR via the additional effects of compound drought.
Journal Article
A two-step leaching method designed based on chemical fraction distribution of the heavy metals for selective leaching of Cd, Zn, Cu, and Pb from metallurgical sludge
by
Wang, Fen
,
Yu, Junxia
,
Xu, Yuanlai
in
Aquatic Pollution
,
Atmospheric Protection/Air Quality Control/Air Pollution
,
Cadmium
2018
For selective leaching and highly effective recovery of heavy metals from a metallurgical sludge, a two-step leaching method was designed based on the distribution analysis of the chemical fractions of the loaded heavy metal. Hydrochloric acid (HCl) was used as a leaching agent in the first step to leach the relatively labile heavy metals and then ethylenediamine tetraacetic acid (EDTA) was applied to leach the residual metals according to their different fractional distribution. Using the two-step leaching method, 82.89% of Cd, 55.73% of Zn, 10.85% of Cu, and 0.25% of Pb were leached in the first step by 0.7 M HCl at a contact time of 240 min, and the leaching efficiencies for Cd, Zn, Cu, and Pb were elevated up to 99.76, 91.41, 71.85, and 94.06%, by subsequent treatment with 0.2 M EDTA at 480 min, respectively. Furthermore, HCl leaching induced fractional redistribution, which might increase the mobility of the remaining metals and then facilitate the following metal removal by EDTA. The facilitation was further confirmed by the comparison to the one-step leaching method with single HCl or single EDTA, respectively. These results suggested that the designed two-step leaching method by HCl and EDTA could be used for selective leaching and effective recovery of heavy metals from the metallurgical sludge or heavy metal-contaminated solid media.
Journal Article