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"Arvanitis, Theodoros N"
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Data-driven FMEA approach for hazard identification and risk evaluation in digital health
by
Harrison, Stuart
,
Maple, Carsten
,
Epiphaniou, Gregory
in
639/705/1046
,
639/705/258
,
639/705/531
2025
The increasing digitization of healthcare data systems presents substantial opportunities for enhancing patient care and operational efficiency, while simultaneously introducing critical vulnerabilities such as unauthorized access, inconsistent data formats, and privacy breaches. To systematically address these risks, this study employs Failure Modes and Effects Analysis (FMEA) to identify, evaluate, and prioritize potential hazards within digital healthcare systems. It is among the first to apply the FMEA approach in a comprehensive manner to assess risks across diverse healthcare data categories and modalities, offering a novel perspective on the vulnerabilities inherent in digital health systems. Through a structured methodology, this research investigates risks across three key healthcare data categories, such as clinical, operational, and patient-reported, as well as across five major data modalities including text, image, tabular, audio, and video. Each identified failure mode was assessed through expert consultation and comprehensive literature review, considering its severity, occurrence, and detectability, and subsequently assigned a Risk Priority Number for quantitative prioritization. Key findings highlighted significant risks, including unauthorized access, data corruption, transmission errors, and privacy breaches, that threaten patient safety and system reliability. This study provides actionable recommendations to strengthen data integrity, security, and interoperability, supporting the safe adoption of AI, blockchain, and other emerging technologies in developing secure and resilient digital healthcare systems.
Journal Article
Timing and correction of stepping movements with a virtual reality avatar
2020
Research into the ability to coordinate one's movements with external cues has focussed on the use of simple rhythmic, auditory and visual stimuli, or interpersonal coordination with another person. Coordinating movements with a virtual avatar has not been explored, in the context of responses to temporal cues. To determine whether cueing of movements using a virtual avatar is effective, people's ability to accurately coordinate with the stimuli needs to be investigated. Here we focus on temporal cues, as we know from timing studies that visual cues can be difficult to follow in the timing context. Real stepping movements were mapped onto an avatar using motion capture data. Healthy participants were then motion captured whilst stepping in time with the avatar's movements, as viewed through a virtual reality headset. The timing of one of the avatar step cycles was accelerated or decelerated by 15% to create a temporal perturbation, for which participants would need to correct to, in order to remain in time. Step onset times of participants relative to the corresponding step-onsets of the avatar were used to measure the timing errors (asynchronies) between them. Participants completed either a visual-only condition, or auditory-visual with footstep sounds included, at two stepping tempo conditions (Fast: 400ms interval, Slow: 800ms interval). Participants' asynchronies exhibited slow drift in the Visual-Only condition, but became stable in the Auditory-Visual condition. Moreover, we observed a clear corrective response to the phase perturbation in both the fast and slow tempo auditory-visual conditions. We conclude that an avatar's movements can be used to influence a person's own motion, but should include relevant auditory cues congruent with the movement to ensure a suitable level of entrainment is achieved. This approach has applications in physiotherapy, where virtual avatars present an opportunity to provide the guidance to assist patients in adhering to prescribed exercises.
Journal Article
Clinical Decision Support Systems for Brain Tumour Diagnosis and Prognosis: A Systematic Review
by
Arvanitis, Theodoros N.
,
Mukherjee, Teesta
,
Lim Choi Keung, Sarah N.
in
Accuracy
,
Brain cancer
,
Brain research
2023
CDSSs are being continuously developed and integrated into routine clinical practice as they assist clinicians and radiologists in dealing with an enormous amount of medical data, reduce clinical errors, and improve diagnostic capabilities. They assist detection, classification, and grading of brain tumours as well as alert physicians of treatment change plans. The aim of this systematic review is to identify various CDSSs that are used in brain tumour diagnosis and prognosis and rely on data captured by any imaging modality. Based on the 2020 preferred reporting items for systematic reviews and meta-analyses (PRISMA) protocol, the literature search was conducted in PubMed and Engineering Village Compendex databases. Different types of CDSSs identified through this review include Curiam BT, FASMA, MIROR, HealthAgents, and INTERPRET, among others. This review also examines various CDSS tool types, system features, techniques, accuracy, and outcomes, to provide the latest evidence available in the field of neuro-oncology. An overview of such CDSSs used to support clinical decision-making in the management and treatment of brain tumours, along with their benefits, challenges, and future perspectives has been provided. Although a CDSS improves diagnostic capabilities and healthcare delivery, there is lack of specific evidence to support these claims. The absence of empirical data slows down both user acceptance and evaluation of the actual impact of CDSS on brain tumour management. Instead of emphasizing the advantages of implementing CDSS, it is important to address its potential drawbacks and ethical implications. By doing so, it can promote the responsible use of CDSS and facilitate its faster adoption in clinical settings.
Journal Article
A novel transformer-based approach for cardiovascular disease detection
by
Abbasi, Saadullah Farooq
,
Arvanitis, Theodoros N.
,
Noor, Nimra
in
Accuracy
,
Algorithms
,
Cardiac arrhythmia
2025
According to the World Health Organization, cardiovascular diseases (CVDs) account for an estimated 17.9 million deaths annually. CVDs refer to disorders of the heart and blood vessels such as arrhythmia, atrial fibrillation, congestive heart failure, and normal sinus rhythm. Early prediction of these diseases can significantly reduce the number of annual deaths. This study proposes a novel, efficient, and low-cost transformer-based algorithm for CVD classification. Initially, 56 features were extracted from electrocardiography recordings using 1,200 cardiac ailment records, with each of the four diseases represented by 300 records. Then, random forest was used to select the 13 most prominent features. Finally, a novel transformer-based algorithm has been developed to classify four classes of cardiovascular diseases. The proposed study achieved a maximum accuracy, precision, recall, and F1 score of 0.9979, 0.9959, 0.9958, and 0.9959, respectively. The proposed algorithm outperformed all the existing state-of-the-art algorithms for CVD classification.
Journal Article
Combining multi-site magnetic resonance imaging with machine learning predicts survival in pediatric brain tumors
by
Novak, Jan
,
Bennett, Christopher
,
Grist, James T.
in
692/308/3187
,
692/308/53/2423
,
692/4028/67/1857
2021
Brain tumors represent the highest cause of mortality in the pediatric oncological population. Diagnosis is commonly performed with magnetic resonance imaging. Survival biomarkers are challenging to identify due to the relatively low numbers of individual tumor types. 69 children with biopsy-confirmed brain tumors were recruited into this study. All participants had perfusion and diffusion weighted imaging performed at diagnosis. Imaging data were processed using conventional methods, and a Bayesian survival analysis performed. Unsupervised and supervised machine learning were performed with the survival features, to determine novel sub-groups related to survival. Sub-group analysis was undertaken to understand differences in imaging features. Survival analysis showed that a combination of diffusion and perfusion imaging were able to determine two novel sub-groups of brain tumors with different survival characteristics (p < 0.01), which were subsequently classified with high accuracy (98%) by a neural network. Analysis of high-grade tumors showed a marked difference in survival (p = 0.029) between the two clusters with high risk and low risk imaging features. This study has developed a novel model of survival for pediatric brain tumors. Tumor perfusion plays a key role in determining survival and should be considered as a high priority for future imaging protocols.
Journal Article
Magnetic resonance imaging (MRI) radiomics in paediatric neuro-oncology: A systematic review of clinical applications, feature interpretation, and biological insights in the characterisation and management of childhood brain tumours
by
Arvanitis, Theodoros N
,
Mukherjee, Teesta
,
Pournik, Omid
in
Brain cancer
,
Childhood
,
Magnetic resonance imaging
2025
Background
Childhood brain tumours, even though rare, present with significant diagnostic and treatment challenges. Radiomics involves feature extraction that is data-driven from standard imaging modalities, such as magnetic resonance imaging (MRI). In paediatric brain tumour imaging, MRI is often preferred because it is non-invasive and avoids exposure to radiation, making it safer for children. Radiomic features reveal additional information about tumour morphology and heterogeneity. By integrating biological meaning into imaging data, this approach enhances our understanding of tumour biology, thus supporting improved classification, treatment planning and management.
Purpose
This review focuses on MRI-based radiomics for the diagnosis and prognosis of childhood brain tumours. It assesses various approaches used in image pre-processing, tumour segmentation, feature extraction, and predictive model development to understand their accuracy and outcome, while it aims to understand the biological meaning and interpretation of radiomic features.
Methods
A systematic review was conducted, including 559 MRI-based radiomics studies in PubMed and Engineering Village Compendex databases, following preferred reporting items for systematic reviews and meta-analyses guidelines (PROSPERO registration: CRD42024503524). Data extraction focused on age, sample size, tumour type, pre-processing techniques, segmentation methods, feature extraction, and performance metrics.
Results
Nineteen studies were included, primarily addressing ependymoma (EP) and medulloblastoma (MB). Common pre-processing methods included intensity normalisation (n = 11) and bias correction (n = 4). GLCM (n = 12) and GLRLM (n = 7) were frequently used features, with LASSO (n = 8) and PCA (n = 2) as leading selection methods. SVM was the most used classification algorithm (n = 9), with an AUC range of 0.858–0.977. We have included the biological meaning and clinical significance of radiomic features to further understand why these insights are important.
Conclusion
While challenges such as limited datasets and varied imaging protocols exist, we recommend identifying and integrating the most informative radiomic features to enhance diagnostic and prognostic accuracy in childhood brain tumours, ultimately improving patient outcomes.
Journal Article
Using digital tools in clinical, health and social care research: a mixed-methods study of UK stakeholders
by
Craddock, Carly
,
Evans, Mark
,
Clohessy, Sophie
in
Clinical Trial
,
COVID-19
,
COVID-19 - epidemiology
2024
ObjectiveThe COVID-19 pandemic accelerated changes to clinical research methodology, with clinical studies being carried out via online/remote means. This mixed-methods study aimed to identify which digital tools are currently used across all stages of clinical research by stakeholders in clinical, health and social care research and investigate their experience using digital tools.DesignTwo online surveys followed by semistructured interviews were conducted. Interviews were audiorecorded, transcribed and analysed thematically.Setting, participantsTo explore the digital tools used since the pandemic, survey participants (researchers and related staff (n=41), research and development staff (n=25)), needed to have worked on clinical, health or social care research studies over the past 2 years (2020–2022) in an employing organisation based in the West Midlands region of England (due to funding from a regional clinical research network (CRN)). Survey participants had the opportunity to participate in an online qualitative interview to explore their experiences of digital tools in greater depth (n=8).ResultsSix themes were identified in the qualitative interviews: ‘definition of a digital tool in clinical research’; ‘impact of the COVID-19 pandemic’; ‘perceived benefits/drawbacks of digital tools’; ‘selection of a digital tool’; ‘barriers and overcoming barriers’ and ‘future digital tool use’. The context of each theme is discussed, based on the interview results.ConclusionsFindings demonstrate how digital tools are becoming embedded in clinical research, as well as the breadth of tools used across different research stages. The majority of participants viewed the tools positively, noting their ability to enhance research efficiency. Several considerations were highlighted; concerns about digital exclusion; need for collaboration with digital expertise/clinical staff, research on tool effectiveness and recommendations to aid future tool selection. There is a need for the development of resources to help optimise the selection and use of appropriate digital tools for clinical research staff and participants.
Journal Article
Comparison of functional thalamic segmentation from seed-based analysis and ICA
by
Mullinger, Karen J.
,
Wilson, Rebecca S.
,
Arvanitis, Theodoros N.
in
Adult
,
Brain Mapping - methods
,
Cerebral Cortex - physiology
2015
Information flow between the thalamus and cerebral cortex is a crucial component of adaptive brain function, but the details of thalamocortical interactions in human subjects remain unclear. The principal aim of this study was to evaluate the agreement between functional thalamic network patterns, derived using seed-based connectivity analysis and independent component analysis (ICA) applied separately to resting state functional MRI (fMRI) data from 21 healthy participants. For the seed-based analysis, functional thalamic parcellation was achieved by computing functional connectivity (FC) between thalamic voxels and a set of pre-defined cortical regions. Thalamus-constrained ICA provided an alternative parcellation. Both FC analyses demonstrated plausible and comparable group-level thalamic subdivisions, in agreement with previous work. Quantitative assessment of the spatial overlap between FC thalamic segmentations, and comparison of each to a histological “gold-standard” thalamic atlas and a structurally-defined thalamic atlas, highlighted variations between them and, most notably, differences with both histological and structural results. Whilst deeper understanding of thalamocortical connectivity rests upon identification of features common to multiple non-invasive neuroimaging techniques (e.g. FC, structural connectivity and anatomical localisation of individual-specific nuclei), this work sheds further light on the functional organisation of the thalamus and the varying sensitivities of complementary analyses to resolve it.
•Seed-based functional connectivity and ICA give plausible thalamic segmentations.•Subtle differences are found in group-level and individual subject-level results.•ICA provides additional specificity when comparing with a histological atlas.•Functional parcellations identify largely symmetrical bilateral regions.•Considerable inter-individual variability is observed with both methods.
Journal Article
Magnetic resonance image-based brain tumour segmentation methods: A systematic review
by
Lim Choi Keung, Sarah N
,
Bhalodiya, Jayendra M
,
Arvanitis, Theodoros N
in
Algorithms
,
Brain cancer
,
Datasets
2022
Background
Image segmentation is an essential step in the analysis and subsequent characterisation of brain tumours through magnetic resonance imaging. In the literature, segmentation methods are empowered by open-access magnetic resonance imaging datasets, such as the brain tumour segmentation dataset. Moreover, with the increased use of artificial intelligence methods in medical imaging, access to larger data repositories has become vital in method development.
Purpose
To determine what automated brain tumour segmentation techniques can medical imaging specialists and clinicians use to identify tumour components, compared to manual segmentation.
Methods
We conducted a systematic review of 572 brain tumour segmentation studies during 2015–2020. We reviewed segmentation techniques using T1-weighted, T2-weighted, gadolinium-enhanced T1-weighted, fluid-attenuated inversion recovery, diffusion-weighted and perfusion-weighted magnetic resonance imaging sequences. Moreover, we assessed physics or mathematics-based methods, deep learning methods, and software-based or semi-automatic methods, as applied to magnetic resonance imaging techniques. Particularly, we synthesised each method as per the utilised magnetic resonance imaging sequences, study population, technical approach (such as deep learning) and performance score measures (such as Dice score).
Statistical tests
We compared median Dice score in segmenting the whole tumour, tumour core and enhanced tumour.
Results
We found that T1-weighted, gadolinium-enhanced T1-weighted, T2-weighted and fluid-attenuated inversion recovery magnetic resonance imaging are used the most in various segmentation algorithms. However, there is limited use of perfusion-weighted and diffusion-weighted magnetic resonance imaging. Moreover, we found that the U-Net deep learning technology is cited the most, and has high accuracy (Dice score 0.9) for magnetic resonance imaging-based brain tumour segmentation.
Conclusion
U-Net is a promising deep learning technology for magnetic resonance imaging-based brain tumour segmentation. The community should be encouraged to contribute open-access datasets so training, testing and validation of deep learning algorithms can be improved, particularly for diffusion- and perfusion-weighted magnetic resonance imaging, where there are limited datasets available.
Journal Article