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result(s) for
"Avena, Sergio"
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Fine-scale genomic analyses of admixed individuals reveal unrecognized genetic ancestry components in Argentina
by
Silvero, Natalia
,
Dipierri, José Edgardo
,
Motti, Josefina M. B.
in
Analysis
,
Argentines
,
Biology and Life Sciences
2020
Similarly to other populations across the Americas, Argentinean populations trace back their genetic ancestry into African, European and Native American ancestors, reflecting a complex demographic history with multiple migration and admixture events in pre- and post-colonial times. However, little is known about the sub-continental origins of these three main ancestries. We present new high-throughput genotyping data for 87 admixed individuals across Argentina. This data was combined to previously published data for admixed individuals in the region and then compared to different reference panels specifically built to perform population structure analyses at a sub-continental level. Concerning the Native American ancestry, we could identify four Native American components segregating in modern Argentinean populations. Three of them are also found in modern South American populations and are specifically represented in Central Andes, Central Chile/Patagonia, and Subtropical and Tropical Forests geographic areas. The fourth component might be specific to the Central Western region of Argentina, and it is not well represented in any genomic data from the literature. As for the European and African ancestries, we confirmed previous results about origins from Southern Europe, Western and Central Western Africa, and we provide evidences for the presence of Northern European and Eastern African ancestries.
Journal Article
Genetic admixture patterns in Argentinian Patagonia
by
Lanata, José L.
,
Avena, Sergio
,
Sánchez Carnero, Noela
in
19th century
,
Admixtures
,
African Continental Ancestry Group
2019
As in other Latin American populations, Argentinians are the result of the admixture amongst different continental groups, mainly from America and Europe, and to a lesser extent from Sub-Saharan Africa. However, it is known that the admixture processes did not occur homogeneously throughout the country. Therefore, considering the importance for anthropological, medical and forensic researches, this study aimed to investigate the population genetic structure of the Argentinian Patagonia, through the analysis of 46 ancestry informative markers, in 433 individuals from five different localities. Overall, in the Patagonian sample, the average individual ancestry was estimated as 35.8% Native American (95% CI: 32.2-39.4%), 62.1% European (58.5-65.7%) and 2.1% African (1.7-2.4%). Comparing the five localities studied, statistically significant differences were observed for the Native American and European contributions, but not for the African ancestry. The admixture results combined with the genealogical information revealed intra-regional variations that are consistent with the different geographic origin of the participants and their ancestors. As expected, a high European ancestry was observed for donors with four grandparents born in Europe (96.8%) or in the Central region of Argentina (85%). In contrast, the Native American ancestry increased when the four grandparents were born in the North (71%) or in the South (61.9%) regions of the country, or even in Chile (60.5%). In summary, our results showed that differences on continental ancestry contribution have different origins in each region in Patagonia, and even in each locality, highlighting the importance of knowing the origin of the participants and their ancestors for the correct interpretation and contextualization of the genetic information.
Journal Article
Heterogeneity in Genetic Admixture across Different Regions of Argentina
by
Gignoux, Christopher R.
,
Torres-Mejía, Gabriela
,
Burchard, Esteban González
in
21st century
,
Argentina
,
Biology
2012
The population of Argentina is the result of the intermixing between several groups, including Indigenous American, European and African populations. Despite the commonly held idea that the population of Argentina is of mostly European origin, multiple studies have shown that this process of admixture had an impact in the entire Argentine population. In the present study we characterized the distribution of Indigenous American, European and African ancestry among individuals from different regions of Argentina and evaluated the level of discrepancy between self-reported grandparental origin and genetic ancestry estimates. A set of 99 autosomal ancestry informative markers (AIMs) was genotyped in a sample of 441 Argentine individuals to estimate genetic ancestry. We used non-parametric tests to evaluate statistical significance. The average ancestry for the Argentine sample overall was 65% European (95%CI: 63-68%), 31% Indigenous American (28-33%) and 4% African (3-4%). We observed statistically significant differences in European ancestry across Argentine regions [Buenos Aires province (BA) 76%, 95%CI: 73-79%; Northeast (NEA) 54%, 95%CI: 49-58%; Northwest (NWA) 33%, 95%CI: 21-41%; South 54%, 95%CI: 49-59%; p<0.0001] as well as between the capital and immediate suburbs of Buenos Aires city compared to more distant suburbs [80% (95%CI: 75-86%) versus 68% (95%CI: 58-77%), p = 0.01]. European ancestry among individuals that declared all grandparents born in Europe was 91% (95%CI: 88-94%) compared to 54% (95%CI: 51-57%) among those with no European grandparents (p<0.001). Our results demonstrate the range of variation in genetic ancestry among Argentine individuals from different regions in the country, highlighting the importance of taking this variation into account in genetic association and admixture mapping studies in this population.
Journal Article
Population data of 15 autosomal STR markers from Afro-Bolivians of Nor Yungas Province (Bolivia)
by
Avena, Sergio Alejandro
,
Carnese, Francisco Raúl
,
Iudica, Celia Estela
in
African Continental Ancestry Group - genetics
,
Bolivia
,
Chromosomes, Human - genetics
2015
Allele frequencies and forensic parameters for 15 autosomal loci included in the AmpFlSTR® Identifiler kit were estimated in a sample of 57 unrelated Afro-descendants from Nor Yungas (Bolivia). Buccal swabs samples were obtained from voluntary donors, after consent was given. All loci were in Hardy-Weinberg equilibrium after Bonferroni correction. D21S11 was the most informative locus, while the least discriminating locus was D3S1358. The combined power of discrimination and the combined probability of exclusion were >0.99999999 and >0.99997, respectively. The multidimensional scaling (MDS) plot generated by Rst matrix supported that Afro-Bolivians of Nor Yungas preserved a stronger African descent compared to other admixed Latin American populations. These results amplified the Bolivian databases of autosomal STR loci and may provide a useful tool for human identification tests and population genetic studies.
Journal Article
Perspectivas, motivaciones e intereses en la búsqueda de ancestrías genéticas en Buenos Aires, Argentina
2020
Este artículo propone una aproximación etnográfica al estudio de las perspectivas, motivaciones e intereses de los individuos participantes en el proyecto “Ancestría genética e identidad”. Basados en un corpus de entrevistas y en un marco teórico que utiliza los conceptos de genealogía y pedigrí, indagamos la significación que el dato genético adquiere en la recreación de las historias e identidades personales y familiares, así como el modo en que el test de ancestría genética se articula y entra en negociación con otras experiencias y registros de tipo oral o escrito. En el marco de las investigaciones desarrolladas en este campo, también señalamos la importancia de considerar los contextos sociales, jurídicos y políticos para comprender el impacto de estas nuevas tecnologías.
Journal Article
Mestizaje e identidad en Buenos Aires, Argentina. Experiencias desde la búsqueda individual de datos genéticos
by
Rocca, Francisco Di Fabio
,
Gago, Julia
,
Avena, Sergio
in
adn mitocondrial
,
ancestría
,
Biology
2018
Abstract Since the late nineteenth century, people in Argentina consider to be a homogeneous society of white-European culture and phenotypic traits, with Buenos Aires as an epicenter. In this article we work with interviews and genetic analysis results of 40 participants of the project \"Genetic Ancestry and Identity\", to contextualize the social processes that underlie this concept and to relate the individual genetic data to the history of society. Gene admixture estimation through genetic markers and demographic data in a sample from Buenos Aires Metropolitan Area. Gender bias in the multi-ethnic genetic composition of central Argentina.
Journal Article
Ancient Human Mitogenome of the Beagle Channel (Tierra del Fuego): An Argentine Collaborative Project
2024
The increasing use of massively parallel sequencing in the study of current and ancient human populations has enabled new approaches to bioanthropological and archaeological issues; however, its application to archaeological samples requires the use of technologies that are not easily accessible outside US and European research centers. To obtain an ancient mitogenome in Argentina, several institutions collaborated to apply massively parallel sequencing and bioinformatic methodologies on an enriched ancient DNA library of an individual from the Beagle Channel (dated 1504 ± 46 years BP), a region of particular interest for this line of inquiry. Phylogenetic reconstruction showed a close relationship with a Yamana from Navarino Island and an individual from Hoste Island (Chilean Antarctic Province): the three shared an ancestor who lived between 203 and 4,439 years ago. These three have mutations reported only for current and ancient individuals from the Beagle Channel, and their relationship with the rest of the D1g sub-haplogroups is unclear. The results obtained here are consistent with the reduction of mobility in the Fuegian archipelago around 4500 years BP that has been proposed based on archaeological evidence.
Journal Article
Ancient Human Mitogenome of the Beagle Channel (Tierra del Fuego): An Argentine Collaborative Project
2023
Fil: Crespo, Cristian Marcelo. Universidad Nacional de Tierra del Fuego. Instituto de Ciencias Polares, Recursos Naturales y Ambiente; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina
Journal Article
HISTORIA POBLACIONAL Y ANÁLISIS ANTROPOGENÉTICO DE LA CIUDAD DE SALTA
by
Rocca, Francisco Di Fabio
,
Carnese, Francisco Raúl
,
Avena, Sergio
in
Genetics
,
Immigration
,
Mitochondrial DNA
2016
38 Shriver, Mark, Esteban Parra, Sonia Dios, Carolina Bonilla, Heather Norton, Celina Jovel, Carrie Pfaff, Cecily Jones, Aisha Massac, Neil Cameron, Archie Baron, Tabhita Jackson, George Argyropoulos, Li Jin, Clive Hoggart, Paul McKeigue y Rick Kittles, \"Skin pigmentation, biogeographical ancestry and admixture zapping\", en Human Genetics, N° 112, Tokio, Japón, 2003, pp. 387-399; Rajeevan, Haseena, Usha Soundararajan, Judith Kidd, Andrew Pakstis y Kenneth Kidd, \"ALFRED: an allele frequency resource for research and teaching\", en Nucleic Acids Research, ? 39 , Oxford, 2011, pp. 1-6. De Chubut, Argentina\", en Revista Argentina de Antropología Biológica, 15, La Plata 2013, pp.61-75. 49 Caruso, Graciela, Noemí Acreche y María Virginia Albeza, \"Polimorfismos Hematológicos en Santa Rosa de los Pastos Grandes (Salta)\", en Revista Argentina de Antropología Biológica 2, La Plata, 1999, pp. 227-242; Albeza, Virginia, Antonia Picornell, Noemí Acreche, Carlos Tomas Mas, José Castro Ocón and Misericordia Ramón, \"Genetic Variability at 14 STR loci in the Puna population of north western Argentina\", en Int J Legal Med 116, Tokio (Japón) 2002, pp. 126-132; Acreche, Noemí, Microevolución en Poblaciones Andinas, Editorial Continuos, Salta 2006; Giménez, Pepita, Virginia Albeza, Noemí Acreche, Jose Castro, Misericordia Ramon and Antonia Picornell, \"Genetic Variability at eleven loci and mt DNA in NOA Populations (Puna and Calchaqui Valleys)\", en International Congress Series 1288, Estados Unidos 2006, pp. 97-99; Muñoz, Angel, Virginia Albeza; Noemí Acreche, José Castro, Misericordia Ramon and Antonia Picornell. 59 García, Angelina, Darío Demarchi, Luciana Tovo-Rodriguez, Maia Pauro, Sidia Callegari-Jacques, Francisco Salzano y Mara Hutz, \"High interpopulation homogeneity in Central Argentina as assessed by Ancestry Informative Markers (AIMs)\", en Genetics and Molecular Biology, N°32, Brasil, 2015, pp. 324331 60 Seldin, Michael, Chao Tian, Russell Shigeta, Hugo Scherbarth, Gabriel Silva, John Belmont, Rick Kittles, Susana Gamron, Alberto Allevi, Simon Palatnik, Alejandro Alvarellos, Sergio Paira, Cesar Caprarulo, Carolina Guillerón, Luis Catoggio, Cristina Prigione, Guillermo Berbotto, Mercedes García, Carlos Perandones, Bernardo Pons-Estel, Marta Alaracon-Riquelme, \"Argentine population genetic structure: large variance in Amerindian contribution\", en American journal of physical anthropology, 132, Houston (EEUU) 2007, pp.455-462. 61 Corach, Daniel, Oscar Lao, Ceceilia Bobillo, Kristiaan Van Der Gaag, Sofia Zuniga, Mark Vermeulen, Kate van Dujin, Miriam Goedbloed, Peter Vallone, Walther Parson, Peter de Knijff, Manfred Kayser, \"Inferring continental ancestry of argentineans from autosomal, Y-Chromosomal and mitochondrial DNA\", en Annals of human genetics, 74, Cambridge (RU), 2009, pp.65-76 62 Avena, Sergio et al. 2006, Ob. Cit. 68 Seielstad, Mark, \"Asymmetries in the maternal and paternal genetic histories of Colombian populations\", en American Journal of Human Genetics, 67, Houston (EEUU), 2000, pp. 1062-1066; Marrero, Andrea, Claudio Bravi, Steven Stuart, Jeffrey Long, Fabio Pereira das Neves Leite, Tricia Kommers, Claudia Carvalho, Sergio Junho Pena, Andres Ruiz-Linares, Francisco Salzano, Maria Bortolini, \" Pre- and post-columbian gene an cultural continuity: the case of the Gaucho from southern Brazil\", en Human Heredity, 64, Londres (RU) 2007, pp.160-171. 69 Wang, Sijia, Nicolas Ray, Winston Rojas, Maria Parra, Gabriel Bedoya, Carla Gallo, Giovanni Poletti, Guido Mazzotti, Kim Hill, Ana Hurtado, Beatriz Camrena, Humberto Nicolini, William Klitz, Ramiro Barrantes, Julio Molina, Nelson Freimer, Maria Bortolini, Francisco Salzano, Maria Petzl-Elrer, Luiza Tsuneto, José Dipierri, Emma Alfaro, Graciela Bailliet, Nestor Bianchi, Elena Llop, Francisco Rothhammer, Laurent Excoffier, Andres Ruiz-Linares, 2008, Ob.Cit.; Motti, Josefina, Marina Muzzio, Virginia Ramallo, Bruno Rodenak Kladniew, Emma Alfaro, José Dipierri, Graciela Bailliet y Claudio.
Journal Article