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result(s) for
"Backe, Jason"
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Structural diversity of xylans in the cell walls of monocots
by
O’Neill, Malcolm A.
,
Peña, Maria J.
,
Backe, Jason
in
Agriculture
,
Alismatales
,
Alismatales - chemistry
2016
Most studies of xylan structure in monocot cell walls have emphasized members of the Poaceae (grasses). Thus, there is a paucity of information regarding xylan structure in other commelinid and in non-commelinid monocot walls. Here, we describe the major structural features of the xylans produced by plants selected from ten of the twelve monocot orders. Glucuronoxylans comparable to eudicot secondary wall glucuronoxylans are abundant in noncommelinid walls. However, the α-D-glucuronic acid/4-Omethyl-α-D-glucuronic acid is often substituted at O-2 by an α-L-arabinopyranose residue in Alismatales and Asparagales glucuronoxylans. Glucuronoarabinoxylans were the only xylans detected in the cell walls of five different members of the Poaceae family (grasses). By contrast, both glucuronoxylan and glucuronoarabinoxylan are formed by the Zingiberales and Commelinales (commelinids). At least one species of each monocot order, including the Poales, forms xylan with the reducing end sequence -4)-β-D-Xylp-(1,3)-α-L-Rhap-(1,2)-α-D-GalpA-(1,4)-D-Xyl first identified in eudicot and gymnosperm glucuronoxylans. This sequence was not discernible in the arabinopyranose-containing glucuronoxylans of the Alismatales and Asparagales or the glucuronoarabinoxylans of the Poaceae. Rather, our data provide additional evidence that in Poaceae glucuronoarabinoxylan, the reducing end xylose residue is often substituted at O-2 with 4-O-methyl glucuronic acid or at O-3 with arabinofuranose. The variations in xylan structure and their implications for the evolution and biosynthesis of monocot cell walls are discussed.
Journal Article
4-O-methylation of glucuronic acid in Arabidopsis glucuronoxylan is catalyzed by a domain of unknown function family 579 protein
by
Ratnaparkhe, Supriya
,
Darvill, Alan G
,
Ragauskas, Arthur J
in
Arabidopsis
,
Arabidopsis - enzymology
,
Arabidopsis - genetics
2012
The hemicellulose 4- O -methyl glucuronoxylan is one of the principle components present in the secondary cell walls of eudicotyledonous plants. However, the biochemical mechanisms leading to the formation of this polysaccharide and the effects of modulating its structure on the physical properties of the cell wall are poorly understood. We have identified and functionally characterized an Arabidopsis glucuronoxylan methyltransferase (GXMT) that catalyzes 4- O -methylation of the glucuronic acid substituents of this polysaccharide. AtGXMT1, which was previously classified as a domain of unknown function (DUF) 579 protein, specifically transfers the methyl group from S-adenosyl- l -methionine to O -4 of α- d -glucopyranosyluronic acid residues that are linked to O -2 of the xylan backbone. Biochemical characterization of the recombinant enzyme indicates that GXMT1 is localized in the Golgi apparatus and requires Co ²⁺ for optimal activity in vitro. Plants lacking GXMT1 synthesize glucuronoxylan in which the degree of 4- O -methylation is reduced by 75%. This result is correlated to a change in lignin monomer composition and an increase in glucuronoxylan release during hydrothermal treatment of secondary cell walls. We propose that the DUF579 proteins constitute a previously undescribed family of cation-dependent, polysaccharide-specific O -methyl-transferases. This knowledge provides new opportunities to selectively manipulate polysaccharide O -methylation and extends the portfolio of structural targets that can be modified either alone or in combination to modulate biopolymer interactions in the plant cell wall.
Journal Article
AtFUT4 and AtFUT6 Are Arabinofuranose-Specific Fucosyltransferases
by
Pfrengle, Fabian
,
Peña, Maria J.
,
Moremen, Kelley W.
in
Arabinogalactan
,
arabinogalactan protein
,
Arabinose
2021
The bulk of plant biomass is comprised of plant cell walls, which are complex polymeric networks, composed of diverse polysaccharides, proteins, polyphenolics, and hydroxyproline-rich glycoproteins (HRGPs). Glycosyltransferases (GTs) work together to synthesize the saccharide components of the plant cell wall. The
Arabidopsis thaliana
fucosyltransferases (FUTs),
At
FUT4, and
At
FUT6, are members of the plant-specific GT family 37 (GT37).
At
FUT4 and
At
FUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs.
At
FUT4 and
At
FUT6 were recombinantly expressed in mammalian HEK293 cells and purified for biochemical analysis. We report an updated understanding on the specificities of
At
FUT4 and
At
FUT6 that are involved in the synthesis of wall localized AGPs. Our findings suggest that they are selective enzymes that can utilize various arabinogalactan (AG)-like and non-AG-like oligosaccharide acceptors, and only require a free, terminal arabinofuranose. We also report with GUS promoter-reporter gene studies that
AtFUT4
and
AtFUT6
gene expression is sub-localized in different parts of developing
A. thaliana
roots.
Journal Article
Downregulation of a UDP-Arabinomutase Gene in Switchgrass (Panicum virgatum L.) Results in Increased Cell Wall Lignin While Reducing Arabinose-Glycans
by
Baxter, Holly L.
,
Poovaiah, Charleson R.
,
Peña, Maria J.
in
09 BIOMASS FUELS
,
Arabinose
,
Arabinoxylans
2016
Switchgrass (
L.) is a C
perennial prairie grass and a dedicated feedstock for lignocellulosic biofuels. Saccharification and biofuel yields are inhibited by the plant cell wall's natural recalcitrance against enzymatic degradation. Plant hemicellulose polysaccharides such as arabinoxylans structurally support and cross-link other cell wall polymers. Grasses predominately have Type II cell walls that are abundant in arabinoxylan, which comprise nearly 25% of aboveground biomass. A primary component of arabinoxylan synthesis is uridine diphosphate (UDP) linked to arabinofuranose (Ara
). A family of UDP-arabinopyranose mutase (UAM)/reversible glycosylated polypeptides catalyze the interconversion between UDP-arabinopyranose (UDP-Ara
) and UDP-Ara
.
The expression of a switchgrass arabinoxylan biosynthesis pathway gene,
, was decreased via RNAi to investigate its role in cell wall recalcitrance in the feedstock.
encodes a switchgrass homolog of UDP-arabinose mutase, which converts UDP-Ara
to UDP-Ara
. Southern blot analysis revealed each transgenic line contained between one to at least seven T-DNA insertions, resulting in some cases, a 95% reduction of native
transcript in stem internodes. Transgenic plants had increased pigmentation in vascular tissues at nodes, but were otherwise similar in morphology to the non-transgenic control. Cell wall-associated arabinose was decreased in leaves and stems by over 50%, but there was an increase in cellulose. In addition, there was a commensurate change in arabinose side chain extension. Cell wall lignin composition was altered with a concurrent increase in lignin content and transcript abundance of lignin biosynthetic genes in mature tillers. Enzymatic saccharification efficiency was unchanged in the transgenic plants relative to the control.
Plants with attenuated
transcript had increased cellulose and lignin in cell walls. A decrease in cell wall-associated arabinose was expected, which was likely caused by fewer Ara
residues in the arabinoxylan. The decrease in arabinoxylan may cause a compensation response to maintain cell wall integrity by increasing cellulose and lignin biosynthesis. In cases in which increased lignin is desired, e.g., feedstocks for carbon fiber production, downregulated
coupled with altered expression of other arabinoxylan biosynthesis genes might result in even higher production of lignin in biomass.
Journal Article
At FUT4 and At FUT6 Are Arabinofuranose-Specific Fucosyltransferases
2021
The bulk of plant biomass is comprised of plant cell walls, which are complex polymeric networks, composed of diverse polysaccharides, proteins, polyphenolics, and hydroxyproline-rich glycoproteins (HRGPs). Glycosyltransferases (GTs) work together to synthesize the saccharide components of the plant cell wall. The
fucosyltransferases (FUTs),
FUT4, and
FUT6, are members of the plant-specific GT family 37 (GT37).
FUT4 and
FUT6 transfer fucose (Fuc) onto arabinose (Ara) residues of arabinogalactan (AG) proteins (AGPs) and have been postulated to be non-redundant AGP-specific FUTs.
FUT4 and
FUT6 were recombinantly expressed in mammalian HEK293 cells and purified for biochemical analysis. We report an updated understanding on the specificities of
FUT4 and
FUT6 that are involved in the synthesis of wall localized AGPs. Our findings suggest that they are selective enzymes that can utilize various arabinogalactan (AG)-like and non-AG-like oligosaccharide acceptors, and only require a free, terminal arabinofuranose. We also report with GUS promoter-reporter gene studies that
and
gene expression is sub-localized in different parts of developing
roots.
Journal Article
The Student Taught, the Teacher Learned
2014
With his hair, eyebrows and goatee dyed a flaming red, Jason Backe was hard to miss. But it wasn't his looks that first caught Ted Gibson's attention back in 1994. Nor was it Mr. Backe's easy laugh or impish charm, or that Mr. Backe, a student at the time at the Horst Education Center, a beauty school in Minneapolis, had twice walked...
Newspaper Article
Pick up the pace
2008
The Tigers pulled away in the second half and knocked off the Sacred Heart girls basketball team 48-22. Kelsey Baldwin got to the free-throw line for Sacred Heart, but Smithton still held a 13-5 lead after one quarter.
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