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1,494 result(s) for "Barclay, R."
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Exceptional continental record of biotic recovery after the Cretaceous–Paleogene mass extinction
We report a time-calibrated stratigraphic section in Colorado that contains unusually complete fossils of mammals, reptiles, and plants and elucidates the drivers and tempo of biotic recovery during the poorly known first million years after the Cretaceous–Paleogene mass extinction (KPgE). Within ∼100 thousand years (ka) post-KPgE, mammalian taxonomic richness doubled, and maximum mammalian body mass increased to near pre-KPgE levels. A threefold increase in maximum mammalian body mass and dietary niche specialization occurred at ∼300 ka post-KPgE, concomitant with increased megafloral standing species richness. The appearance of additional large mammals occurred by ∼700 ka post-KPgE, coincident with the first appearance of Leguminosae (the bean family). These concurrent plant and mammal originations and body-mass shifts coincide with warming intervals, suggesting that climate influenced post-KPgE biotic recovery.
Female little brown bats require both building and natural roosts in a mountainous environment with short summers
The little brown bat (Myotis lucifugus) is an endangered species that occurs throughout most of North America. The recovery strategy for little brown bats in Canada identifies a need to understand habitat use and protect important bat habitat across the species' Canadian range; however, bat roosting habitat requirements have not been well studied in mountainous environments within the northern part of the species' range. Our objective was to understand the use of building and natural roosts by female little brown bats in the Canadian Rocky Mountains. Over two summers, we captured little brown bats in Banff, Yoho, and Kootenay National Parks, in Alberta and British Columbia, Canada, and tracked 49 females to their day roosts. Buildings were the only roost type used by radio‐tagged bats of all reproductive stages, the dominant roost type used throughout the reproductive period, and the only structures in which we located maternity colonies. Buildings also appeared to shape the distribution of foraging female and reproductive female bats such that few were captured at long distances from towns and building clusters. Compared with bats in more southern and in non‐mountainous areas, bats in our study area had delayed juvenile weaning and volancy, began hibernation early, and had low reproductive rates. We suggest that buildings are a key habitat for female little brown bats to persist at their current levels in our study area, by providing thermal conditions that promote overwinter survival; additional reproductive delays caused by torpor use in cool natural roosts would likely reduce juvenile and adult female overwinter survival below the levels required to sustain populations. Nevertheless, building colonies were unusually small, and bats had relatively low fidelity to particular building roosts, suggesting that building roosts may not consistently meet bats' needs. Some nonreproductive and pregnant females also frequently used natural roosts, particularly after colder nights; these roosts may be important in facilitating torpor and energy conservation for these bats. Because bats are long‐lived with low reproductive output and low juvenile survival, addressing the needs of both reproductive and nonreproductive individuals is important for population persistence.
Causes of Bat Fatalities at Wind Turbines: Hypotheses and Predictions
Thousands of industrial-scale wind turbines are being built across the world each year to meet the growing demand for sustainable energy. Bats of certain species are dying at wind turbines in unprecedented numbers. Species of bats consistently affected by turbines tend to be those that rely on trees as roosts and most migrate long distances. Although considerable progress has been made in recent years toward better understanding the problem, the causes of bat fatalities at turbines remain unclear. In this synthesis, we review hypothesized causes of bat fatalities at turbines. Hypotheses of cause fall into 2 general categories—proximate and ultimate. Proximate causes explain the direct means by which bats die at turbines and include collision with towers and rotating blades, and barotrauma. Ultimate causes explain why bats come close to turbines and include 3 general types: random collisions, coincidental collisions, and collisions that result from attraction of bats to turbines. The random collision hypothesis posits that interactions between bats and turbines are random events and that fatalities are representative of the bats present at a site. Coincidental hypotheses posit that certain aspects of bat distribution or behavior put them at risk of collision and include aggregation during migration and seasonal increases in flight activity associated with feeding or mating. A surprising number of attraction hypotheses suggest that bats might be attracted to turbines out of curiosity, misperception, or as potential feeding, roosting, flocking, and mating opportunities. Identifying, prioritizing, and testing hypothesized causes of bat collisions with wind turbines are vital steps toward developing practical solutions to the problem.
Seasonal phenology of the little brown bat (Myotis lucifugus) at 60° N
To investigate the impact of short summers and long summer solar periods at high latitudes on the behavior of a nocturnal, hibernating mammal, we recorded the phenology of Myotis lucifugus (little brown myotis) at 60° N in the Northwest Territories (NWT), Canada. In particular, we assessed the timing of spring emergence from, and autumn entry into, hibernation, reproduction, and seasonal mass fluctuations. We used a combination of acoustic monitoring and capture surveys at two hibernacula and two maternity roosts during 2011 and 2012. Myotis spp. were active at the hibernacula from late April to late September/early October, suggesting that the “active” season length is similar to that of populations farther south. At maternity colonies, we detected M. lucifugus activity from early May to early October, with peaks during mid‐July in both years. Lactation, fledging, and weaning all occurred later in the NWT than at more southern locations, and reproductive rates were significantly lower than rates observed farther south. The average mass of individuals fluctuated throughout the season, with an initial decline immediately following emergence from hibernation likely reflecting increased energy expenditure due to flight and decreased use of torpor, coupled with relatively low prey intake due to low prey abundance associated with cool temperatures. Females did not appear to have lower pre‐hibernation masses than those in more southern populations, suggesting that despite the cool spring and autumn temperatures, and short summer nights, bats are able to obtain enough energy for reproduction and mass accumulation for hibernation. However, the lower reproductive rates may indicate that there are limitations to life at the northern limits of the species' range.
Influence of Reproductive Status on Occupancy of Salvage‐Logged Boreal Forest by Moose (Alces americanus)
Wildlife‐habitat relationships reflect the behavioral choices made by species in response to perceived risks and rewards. Ungulates must often choose between habitats that provide forage and those offering concealment from predators, yet natural and anthropogenic disturbances create risky landscapes where tradeoffs may be difficult to navigate. Ungulate responses to forest disturbance may vary by sex and reproductive state, given that reproductive females with calves often prioritize predator avoidance. We investigated state‐dependent habitat use by reproductive and solitary moose (Alces americanus) in response to salvage logging after a widespread infestation by spruce beetle (Dendroctonus rufipennis) in the boreal forest of Yukon, Canada. We used camera traps and multistate occupancy models to examine moose occurrence in unsalvaged and salvage‐logged forests at different regenerative stages (0–10 years and 11–25 years postlogging) and levels of tree retention after logging. We compared results to single‐state occupancy models that did not account for reproductive status. As predicted, single‐state models showed high use of stands with low canopy cover and maximum tree removal (i.e., clear‐cuts). This suggested that moose capitalized on shrubby forage available in logged stands, regardless of regenerative stage. However, this result was overly simplistic. Multistate occupancy models revealed that forest age was the most important factor for female moose with calves, in contrast to solitary moose. Females with calves tended to avoid newly logged areas and preferred regenerating and unsalvaged forests with hiding cover, although estimates of effect size had low precision. Climate change is contributing to the rising frequency and severity of bark beetle outbreaks, and post‐infestation salvage logging has been implicated in the decline of moose populations in western Canada. Our results support the need to maintain diverse, mixed‐age forest landscapes to meet the food and cover requirements of moose in different demographic classes. We investigated state‐dependent habitat use by reproductive and solitary moose in response to salvage logging after a widespread spruce bark beetle infestation in Yukon, Canada. We used camera traps and multistate occupancy models to examine moose occurrence in unsalvaged and salvage‐logged forest stands at different regenerative stages (0–10 years and 11–25 years postlogging) and levels of tree retention. Female moose with calves tended to minimize predation risk by using protective forest cover and avoiding recently logged stands, in contrast to the preferences of nonreproductive moose.
Magnetic hydrogel particles improve nanopore sequencing of SARS-CoV-2 and other respiratory viruses
Presented here is a magnetic hydrogel particle enabled workflow for capturing and concentrating SARS-CoV-2 from diagnostic remnant swab samples that significantly improves sequencing results using the Oxford Nanopore Technologies MinION sequencing platform. Our approach utilizes a novel affinity-based magnetic hydrogel particle, circumventing low input sample volumes and allowing for both rapid manual and automated high throughput workflows that are compatible with Nanopore sequencing. This approach enhances standard RNA extraction protocols, providing up to 40 × improvements in viral mapped reads, and improves sequencing coverage by 20–80% from lower titer diagnostic remnant samples. Furthermore, we demonstrate that this approach works for contrived influenza virus and respiratory syncytial virus samples, suggesting that it can be used to identify and improve sequencing results of multiple viruses in VTM samples. These methods can be performed manually or on a KingFisher automation platform.
Hydrogel particles improve detection of SARS-CoV-2 RNA from multiple sample types
Here we present a rapid and versatile method for capturing and concentrating SARS-CoV-2 from contrived transport medium and saliva samples using affinity-capture magnetic hydrogel particles. We demonstrate that the method concentrates virus from 1 mL samples prior to RNA extraction, substantially improving detection of virus using real-time RT-PCR across a range of viral titers (100–1,000,000 viral copies/mL) and enabling detection of virus using the 2019 nCoV CDC EUA Kit down to 100 viral copies/mL. This method is compatible with commercially available nucleic acid extraction kits (i.e., from Qiagen) and a simple heat and detergent method that extracts viral RNA directly off the particle, allowing a sample processing time of 10 min. We furthermore tested our method in transport medium diagnostic remnant samples that previously had been tested for SARS-CoV-2, showing that our method not only correctly identified all positive samples but also substantially improved detection of the virus in low viral load samples. The average improvement in cycle threshold value across all viral titers tested was 3.1. Finally, we illustrate that our method could potentially be used to enable pooled testing, as we observed considerable improvement in the detection of SARS-CoV-2 RNA from sample volumes of up to 10 mL.
Where the past meets the present: connecting nitrogen from watersheds to streams through groundwater flowpaths
Groundwater discharge to streams is a nonpoint source of nitrogen (N) that confounds N mitigation efforts and represents a significant portion of the annual N loading to watersheds. However, we lack an understanding of where and how much groundwater N enters streams and watersheds. Nitrogen concentrations at the end of groundwater flowpaths are the culmination of biogeochemical and physical processes from the contributing land area where groundwater recharges, within the aquifer system, and in the near-stream riparian area where groundwater discharges to streams. Our research objectives were to quantify the spatial distribution of N concentrations at groundwater discharges throughout a mixed land-use watershed and to evaluate how relationships among contributing and riparian land cover, modeled aquifer characteristics, and groundwater discharge biogeochemistry explain the spatial variation in groundwater discharge N concentrations. We accomplished this by integrating high-resolution thermal infrared surveys to locate groundwater discharge, biogeochemical sampling of groundwater, and a particle tracking model that links groundwater discharge locations to their contributing area land cover. Groundwater N loading from groundwater discharges within the watershed varied substantially between and within streambank groundwater discharge features. Groundwater nitrate concentrations were spatially heterogeneous ranging from below 0.03–11.45 mg-N/L, varying up to 20-fold within meters. When combined with the particle tracking model results and land cover metrics, we found that groundwater discharge nitrate concentrations were best predicted by a linear mixed-effect model that explained over 60% of the variation in nitrate concentrations, including aquifer chemistry (dissolved oxygen, Cl − , SO 4 2− ), riparian area forested land cover, and modeled physical aquifer characteristics (discharge, Euclidean distance). Our work highlights the significant spatial variability in groundwater discharge nitrate concentrations within mixed land-use watersheds and the need to understand groundwater N processing across the many spatiotemporal scales within groundwater cycling.
Evidence of Late-Summer Mating Readiness and Early Sexual Maturation in Migratory Tree-Roosting Bats Found Dead at Wind Turbines
Understanding animal mating systems is an important component of their conservation, yet the precise mating times for many species of bats are unknown. The aim of this study was to better understand the details and timing of reproductive events in species of bats that die most frequently at wind turbines in North America, because such information can help inform conservation strategies. We examined the reproductive anatomy of hoary bats (Lasiurus cinereus), eastern red bats (L. borealis), and silver-haired bats (Lasionycteris noctivagans) found dead beneath industrial-scale wind turbines to learn more about when they mate. We evaluated 103 L. cinereus, 18 L. borealis, and 47 Ln. noctivagans from wind energy facilities in the United States and Canada. Histological analysis revealed that most male L. cinereus and L. borealis, as well as over half the Ln. noctivagans examined had sperm in the caudae epididymides by late August, indicating readiness to mate. Testes regression in male hoary bats coincided with enlargement of seminal vesicles and apparent growth of keratinized spines on the glans penis. Seasonality of these processes also suggests that mating could occur during August in L. cinereus. Spermatozoa were found in the uterus of an adult female hoary bat collected in September, but not in any other females. Ovaries of all females sampled had growing secondary or tertiary follicles, indicating sexual maturity even in first-year females. Lasiurus cinereus, L. borealis, and Ln. noctivagans are the only North American temperate bats in which most first-year young of both sexes are known to sexually mature in their first autumn. Our findings provide the first detailed information published on the seasonal timing of mating readiness in these species most affected by wind turbines.
Origins and migratory patterns of bats killed by wind turbines in southern Alberta: evidence from stable isotopes
Large numbers of migratory bats are killed every autumn at wind energy facilities in North America. While this may be troubling from a population perspective, these fatalities provide an opportunity to learn more about bat migration and the origins and summer distributions of migratory bats by using endogenous markers. Such markers include stable isotope values, which have been used to answer questions about ecological systems, such as trophic levels and food webs, and the origins and migratory routes of animals. To estimate the origins of migratory bats, we determined nitrogen (δ 15 N), carbon (δ 13 C), and hydrogen (δ 2 H) stable isotope values of fur (δ 15 N f , δ 13 C f , δ 2 H f, respectively) from hoary bats ( Lasiurus cinereus ) and silver-haired bats ( Lasionycteris noctivagans ) killed at a wind energy facility in southern Alberta, Canada. We determined that mean isotope values varied among species, year, sex, and age class. δ 13 C f and δ 2 H f values indicated that silver-haired bats likely originated in the boreal forest, farther north and/or at higher elevations than the aspen parkland-like habitat suggested by the isotope values of hoary bats. IsoMAP analysis indicated that bat fatalities may have originated from a large catchment area potentially hundreds of kilometers away. Our data provide further evidence for a migration route along the eastern slopes of the Rocky Mountains that is used by bats from across Alberta and beyond, and suggest that fatalities at a single wind energy site have the potential to have far-reaching ecological and population consequences.