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10 result(s) for "Bash Daniil"
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Benchmarking the performance of Bayesian optimization across multiple experimental materials science domains
Bayesian optimization (BO) has been leveraged for guiding autonomous and high-throughput experiments in materials science. However, few have evaluated the efficiency of BO across a broad range of experimental materials domains. In this work, we quantify the performance of BO with a collection of surrogate model and acquisition function pairs across five diverse experimental materials systems. By defining acceleration and enhancement metrics for materials optimization objectives, we find that surrogate models such as Gaussian Process (GP) with anisotropic kernels and Random Forest (RF) have comparable performance in BO, and both outperform the commonly used GP with isotropic kernels. GP with anisotropic kernels has demonstrated the most robustness, yet RF is a close alternative and warrants more consideration because it is free from distribution assumptions, has smaller time complexity, and requires less effort in initial hyperparameter selection. We also raise awareness about the benefits of using GP with anisotropic kernels in future materials optimization campaigns.
Two-step machine learning enables optimized nanoparticle synthesis
In materials science, the discovery of recipes that yield nanomaterials with defined optical properties is costly and time-consuming. In this study, we present a two-step framework for a machine learning-driven high-throughput microfluidic platform to rapidly produce silver nanoparticles with the desired absorbance spectrum. Combining a Gaussian process-based Bayesian optimization (BO) with a deep neural network (DNN), the algorithmic framework is able to converge towards the target spectrum after sampling 120 conditions. Once the dataset is large enough to train the DNN with sufficient accuracy in the region of the target spectrum, the DNN is used to predict the colour palette accessible with the reaction synthesis. While remaining interpretable by humans, the proposed framework efficiently optimizes the nanomaterial synthesis and can extract fundamental knowledge of the relationship between chemical composition and optical properties, such as the role of each reactant on the shape and amplitude of the absorbance spectrum.
Extracting film thickness and optical constants from spectrophotometric data by evolutionary optimization
In this paper, we propose a simple and elegant method to extract the thickness and the optical constants of various films from the reflectance and transmittance spectra in the wavelength range of 350 − 1000 nm. The underlying inverse problem is posed here as an optimization problem. To find unique solutions to this problem, we adopt an evolutionary optimization approach that drives a population of candidate solutions towards the global optimum. An ensemble of Tauc-Lorentz Oscillators (TLOs) and an ensemble of Gaussian Oscillators (GOs), are leveraged to compute the reflectance and transmittance spectra for different candidate thickness values and refractive index profiles. This model-based optimization is solved using two efficient evolutionary algorithms (EAs), namely genetic algorithm (GA) and covariance matrix adaptation evolution strategy (CMAES), such that the resulting spectra simultaneously fit all the given data points in the admissible wavelength range. Numerical results validate the effectiveness of the proposed approach in estimating the optical parameters of interest.
Optimization of Composition and Properties of Hybrid Electronic Composites Using Machine Learning-Assisted High-Throughput Experiments
Demand for development of better materials has never been higher. As requirements for new materials keep rising, the complexity of the traditional techniques of chemical synthesis, materials fabrication and device characterization are proven to be inadequate to meet the demand. Therefore, in this thesis we present a collection of novel methods for high-throughput materials discovery. Through introduction of automation of sample preparation, device characterization and parts of data processing, as well as using machine learning algorithms to assist with interpretation of obtained results and suggestion of next set of experiments to try, we drastically increase the rate of experimental data acquisition, as well as its quality. And all while reducing the involvement of human researcher in the repetitive parts of experiments to minimum. From purely digital materials discovery to autonomous fabrication of hybrid electronic composites, we present a comprehensive collection of new techniques to expand researchers’ toolset rapid materials discovery.
Extracting film thickness and optical constants from spectrophotometric data by evolutionary optimization
In this paper, we propose a simple and elegant method to extract the thickness and the optical constants of various films from the reflectance and transmittance spectra in the wavelength range of 350 − 1000 nm. The underlying inverse problem is posed here as an optimization problem. To find unique solutions to this problem, we adopt an evolutionary optimization approach that drives a population of candidate solutions towards the global optimum. An ensemble of Tauc-Lorentz Oscillators (TLOs) and an ensemble of Gaussian Oscillators (GOs), are leveraged to compute the reflectance and transmittance spectra for different candidate thickness values and refractive index profiles. This model-based optimization is solved using two efficient evolutionary algorithms (EAs), namely genetic algorithm (GA) and covariance matrix adaptation evolution strategy (CMAES), such that the resulting spectra simultaneously fit all the given data points in the admissible wavelength range. Numerical results validate the effectiveness of the proposed approach in estimating the optical parameters of interest.
Accelerated automated screening of viscous graphene suspensions with various surfactants for optimal electrical conductivity
Functional composite thin films have a wide variety of applications in flexible and/or electronic devices, telecommunications and multifunctional emerging coatings. Rapid screening of their properties is a challenging task, especially with multiple components defining the targeted properties. In this work we present a manifold for accelerated automated screening of viscous graphene suspensions for optimal electrical conductivity. Using Opentrons OT2 robotic auto-pipettor, we tested 3 most industrially significant surfactants - PVP, SDS and T80 - by fabricating 288 samples of graphene suspensions in aqueous hydroxypropylmethylcellulose. Enabled by our custom motorized 4-point probe measurement setup and computer vision algorithms, we then measured electrical conductivity of every sample using custom and identified that the highest performance is achieved for PVP-based samples, peaking at 10.4 mS/cm. The automation of the experimental procedure allowed us to perform majority of the experiments using robots, while involvement of human researcher was kept to minimum. Overall the experiment was completed in less than 18 hours, only 3 of which involved humans.
Tackling Data Scarcity with Transfer Learning: A Case Study of Thickness Characterization from Optical Spectra of Perovskite Thin Films
Transfer learning increasingly becomes an important tool in handling data scarcity often encountered in machine learning. In the application of high-throughput thickness as a downstream process of the high-throughput optimization of optoelectronic thin films with autonomous workflows, data scarcity occurs especially for new materials. To achieve high-throughput thickness characterization, we propose a machine learning model called thicknessML that predicts thickness from UV-Vis spectrophotometry input and an overarching transfer learning workflow. We demonstrate the transfer learning workflow from generic source domain of generic band-gapped materials to specific target domain of perovskite materials, where the target domain data only come from limited number (18) of refractive indices from literature. The target domain can be easily extended to other material classes with a few literature data. Defining thickness prediction accuracy to be within-10% deviation, thicknessML achieves 92.2% (with a deviation of 3.6%) accuracy with transfer learning compared to 81.8% (with a deviation of 3.6%) 11.7% without (lower mean and larger standard deviation). Experimental validation on six deposited perovskite films also corroborates the efficacy of the proposed workflow by yielding a 10.5% mean absolute percentage error (MAPE).
Benchmarking the Performance of Bayesian Optimization across Multiple Experimental Materials Science Domains
In the field of machine learning (ML) for materials optimization, active learning algorithms, such as Bayesian Optimization (BO), have been leveraged for guiding autonomous and high-throughput experimentation systems. However, very few studies have evaluated the efficiency of BO as a general optimization algorithm across a broad range of experimental materials science domains. In this work, we evaluate the performance of BO algorithms with a collection of surrogate model and acquisition function pairs across five diverse experimental materials systems, namely carbon nanotube polymer blends, silver nanoparticles, lead-halide perovskites, as well as additively manufactured polymer structures and shapes. By defining acceleration and enhancement metrics for general materials optimization objectives, we find that for surrogate model selection, Gaussian Process (GP) with anisotropic kernels (automatic relevance detection, ARD) and Random Forests (RF) have comparable performance and both outperform the commonly used GP without ARD. We discuss the implicit distributional assumptions of RF and GP, and the benefits of using GP with anisotropic kernels in detail. We provide practical insights for experimentalists on surrogate model selection of BO during materials optimization campaigns.
Predicting thermoelectric properties from crystal graphs and material descriptors - first application for functional materials
We introduce the use of Crystal Graph Convolutional Neural Networks (CGCNN), Fully Connected Neural Networks (FCNN) and XGBoost to predict thermoelectric properties. The dataset for the CGCNN is independent of Density Functional Theory (DFT) and only relies on the crystal and atomic information, while that for the FCNN is based on a rich attribute list mined from Materialsproject.org. The results show that the optimized FCNN is three layer deep and is able to predict the scattering-time independent thermoelectric powerfactor much better than the CGCNN (or XGBoost), suggesting that bonding and density of states descriptors informed from materials science knowledge obtained partially from DFT are vital to predict functional properties.
Machine learning and high-throughput robust design of P3HT-CNT composite thin films for high electrical conductivity
Combining high-throughput experiments with machine learning allows quick optimization of parameter spaces towards achieving target properties. In this study, we demonstrate that machine learning, combined with multi-labeled datasets, can additionally be used for scientific understanding and hypothesis testing. We introduce an automated flow system with high-throughput drop-casting for thin film preparation, followed by fast characterization of optical and electrical properties, with the capability to complete one cycle of learning of fully labeled ~160 samples in a single day. We combine regio-regular poly-3-hexylthiophene with various carbon nanotubes to achieve electrical conductivities as high as 1200 S/cm. Interestingly, a non-intuitive local optimum emerges when 10% of double-walled carbon nanotubes are added with long single wall carbon nanotubes, where the conductivity is seen to be as high as 700 S/cm, which we subsequently explain with high fidelity optical characterization. Employing dataset resampling strategies and graph-based regressions allows us to account for experimental cost and uncertainty estimation of correlated multi-outputs, and supports the proving of the hypothesis linking charge delocalization to electrical conductivity. We therefore present a robust machine-learning driven high-throughput experimental scheme that can be applied to optimize and understand properties of composites, or hybrid organic-inorganic materials.