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result(s) for
"Batalla, Daniel"
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Catch crop diversity increases rhizosphere carbon input and soil microbial biomass
by
Bauer, Bernhard
,
von Wirén Nicolaus
,
Groß, Jonas
in
Agricultural practices
,
Biomass
,
Carbon dioxide
2020
Catch crops increase plant species richness in crop rotations, but are most often grown as pure stands. Here, we investigate the impacts of increasing plant diversity in catch crop rotations on rhizosphere C input and microbial utilization. Mustard (Sinapis alba L.) planted as a single cultivar was compared to diversified catch crop mixtures of four (Mix4) or 12 species (Mix12). We traced the C transfer from shoots to roots towards the soil microbial community and the soil respiration in a 13C pulse labelling field experiment. Net CO2-C uptake from the atmosphere increased by two times in mix 4 and more than three times in mix 12. Higher net ecosystem C production was linked to increasing catch crop diversity and increased belowground transfer rates of recently fixed photoassimilates. The higher rhizosphere C input stimulated the growth and activity of the soil microbiome, which was investigated by phospholipid fatty acid (PLFA) analyses. Total microbial biomass increased from 14 to 22 g m−2 as compared to the fallow and was 18 and 8% higher for mix 12 and mix 4 as compared to mustard. In particular, the fungal and actinobacterial communities profited the most from the higher belowground C input and their biomass increased by 3.4 and 1.3 times as compared to the fallow. The residence time of the 13C pulse, traced in the CO2 flux from the soil environment, increased with plant diversity by up to 1.8 times. The results of this study suggest positive impacts of plant diversity on C cycling by higher atmospheric C uptake, higher transport rates towards the rhizosphere, higher microbial incorporation and prolonged residence time in the soil environment. We conclude that diversified catch crop mixtures improve the efficiency of C cycling in cropping systems and provide a promising tool for sustainable soil management.
Journal Article
The discovery and evaluation of 18FBMS-986229, a novel macrocyclic peptide PET radioligand for the measurement of PD-L1 expression and in-vivo PD-L1 target engagement
2024
Purpose
A same-day PET imaging agent capable of measuring PD-L1 status in tumors is an important tool for optimizing PD-1 and PD-L1 treatments. Herein we describe the discovery and evaluation of a novel, fluorine-18 labeled macrocyclic peptide-based PET ligand for imaging PD-L1.
Methods
[
18
F]BMS-986229
was synthesized via copper mediated click-chemistry to yield a PD-L1 PET ligand with picomolar affinity and was tested as an in-vivo tool for assessing PD-L1 expression.
Results
Autoradiography showed an 8:1 binding ratio in L2987 (PD-L1 (+)) vs. HT-29 (PD-L1 (-)) tumor tissues, with >90% specific binding. Specific radioligand binding (>90%) was observed in human non-small-cell lung cancer (NSCLC) and cynomolgus monkey spleen tissues. Images of PD-L1 (+) tissues in primates were characterized by high signal-to-noise, with low background signal in non-expressing tissues. PET imaging enabled clear visualization of PD-L1 expression in a murine model in vivo, with 5-fold higher uptake in L2987 (PD-L1 (+)) than in control HT-29 (PD-L1 (-)) tumors. Moreover, this imaging agent was used to measure target engagement of PD-L1 inhibitors (peptide or mAb), in PD-L1 (+) tumors as high as 97%.
Conclusion
A novel
18
F-labeled macrocyclic peptide radioligand was developed for PET imaging of PD-L1 expressing tissues that demonstrated several advantages within a nonhuman primate model when compared directly to adnectin- or mAb-based ligands. Clinical studies are currently evaluating
[
18
F]BMS-986229
to measure PD-L1 expression in tumors.
Journal Article
The discovery and evaluation of 18FBMS-986229, a novel macrocyclic peptide PET radioligand for the measurement of PD-L1 expression and in-vivo PD-L1 target engagement
2024
A same-day PET imaging agent capable of measuring PD-L1 status in tumors is an important tool for optimizing PD-1 and PD-L1 treatments. Herein we describe the discovery and evaluation of a novel, fluorine-18 labeled macrocyclic peptide-based PET ligand for imaging PD-L1.PURPOSEA same-day PET imaging agent capable of measuring PD-L1 status in tumors is an important tool for optimizing PD-1 and PD-L1 treatments. Herein we describe the discovery and evaluation of a novel, fluorine-18 labeled macrocyclic peptide-based PET ligand for imaging PD-L1.[18F]BMS-986229 was synthesized via copper mediated click-chemistry to yield a PD-L1 PET ligand with picomolar affinity and was tested as an in-vivo tool for assessing PD-L1 expression.METHODS[18F]BMS-986229 was synthesized via copper mediated click-chemistry to yield a PD-L1 PET ligand with picomolar affinity and was tested as an in-vivo tool for assessing PD-L1 expression.Autoradiography showed an 8:1 binding ratio in L2987 (PD-L1 (+)) vs. HT-29 (PD-L1 (-)) tumor tissues, with >90% specific binding. Specific radioligand binding (>90%) was observed in human non-small-cell lung cancer (NSCLC) and cynomolgus monkey spleen tissues. Images of PD-L1 (+) tissues in primates were characterized by high signal-to-noise, with low background signal in non-expressing tissues. PET imaging enabled clear visualization of PD-L1 expression in a murine model in vivo, with 5-fold higher uptake in L2987 (PD-L1 (+)) than in control HT-29 (PD-L1 (-)) tumors. Moreover, this imaging agent was used to measure target engagement of PD-L1 inhibitors (peptide or mAb), in PD-L1 (+) tumors as high as 97%.RESULTSAutoradiography showed an 8:1 binding ratio in L2987 (PD-L1 (+)) vs. HT-29 (PD-L1 (-)) tumor tissues, with >90% specific binding. Specific radioligand binding (>90%) was observed in human non-small-cell lung cancer (NSCLC) and cynomolgus monkey spleen tissues. Images of PD-L1 (+) tissues in primates were characterized by high signal-to-noise, with low background signal in non-expressing tissues. PET imaging enabled clear visualization of PD-L1 expression in a murine model in vivo, with 5-fold higher uptake in L2987 (PD-L1 (+)) than in control HT-29 (PD-L1 (-)) tumors. Moreover, this imaging agent was used to measure target engagement of PD-L1 inhibitors (peptide or mAb), in PD-L1 (+) tumors as high as 97%.A novel 18F-labeled macrocyclic peptide radioligand was developed for PET imaging of PD-L1 expressing tissues that demonstrated several advantages within a nonhuman primate model when compared directly to adnectin- or mAb-based ligands. Clinical studies are currently evaluating [18F]BMS-986229 to measure PD-L1 expression in tumors.CONCLUSIONA novel 18F-labeled macrocyclic peptide radioligand was developed for PET imaging of PD-L1 expressing tissues that demonstrated several advantages within a nonhuman primate model when compared directly to adnectin- or mAb-based ligands. Clinical studies are currently evaluating [18F]BMS-986229 to measure PD-L1 expression in tumors.
Journal Article
Tracing Organic Carbon Cycling in Agricultural Soils of Different Catch Crop Management Systems by 13c Pulse Labelling
2018
The loss of nutrients from agricultural soils leads to environmental problems and the infraction of environmental laws. Catch crops are a type of cover crop that are used in rotations as a way of avoiding soil nutrients from leaching. These crops may enhance other properties of the soil regarding quality and biological activity. The aim of this thesis is to explore these benefits by comparing fallow soil, to that of a single-species catch crop (Mustard) and the soils of two multi-species catch crops (Mix4, containing four species, and a commercial mix TerraLife, containing thirteen), on the same agricultural soil in Lower Saxony, Germany.A 13C pulse labelling experiment was conducted to trace C through the atmosphere-plant-soil microbiome interphase. Net Ecosystem Production (NEP) of the different catch crops was calculated by monitoring gas fluxes. Soil microbial phospholipid fatty acids (PLFAs) were extracted, as a means of quantifying the relative amount of the microbial community and identifying relative differences among the soil samples.NEP was significantly higher in the TerraLife soil when compared to the fallow soil and the Mustard suggesting that the higher the plant diversity, the higher the C fixation. The TerraLife soil presented higher extracted PLFA values, being significantly higher than the fallow soil at 0-10 cm for total PLFAs and fungal PLFAs, suggesting that higher plant diversity induces higher microbial biomass. And the soil microbial community structure seemed to present two different trends, with a higher Fungi/Bacteria ratio in the TerraLife and Mix4 soils and similar values for the Mustard and fallow soils.The results suggest that multi-species catch crops provide higher C fixation rates and promote soil microbiota when compared to single-species crops or fallow soil. Further research that focuses on functional traits between individual catch crops and their microbiome is still needed in order to contrast and better interpret the information currently available on the subject.
Dissertation
Treg in inborn errors of immunity: gaps, knowns and future perspectives
by
Acevedo, Daniel
,
Kennedy-Batalla, Rebeca
,
Seoane-Reula, Ma Elena
in
Autoimmune Diseases
,
Autoimmunity
,
CD25 antigen
2024
Regulatory T cells (Treg) are essential for immune balance, preventing overreactive responses and autoimmunity. Although traditionally characterized as CD4+CD25+CD127 low FoxP3 hi , recent research has revealed diverse Treg subsets such as Tr1, Tr1-like, and CD8 Treg. Treg dysfunction leads to severe autoimmune diseases and immune-mediated inflammatory disorders. Inborn errors of immunity (IEI) are a group of disorders that affect correct functioning of the immune system. IEI include Tregopathies caused by genetic mutations affecting Treg development or function. In addition, Treg dysfunction is also observed in other IEIs, whose underlying mechanisms are largely unknown, thus requiring further research. This review provides a comprehensive overview and discussion of Treg in IEI focused on: A) advances and controversies in the evaluation of Treg extended subphenotypes and function; B) current knowledge and gaps in Treg disturbances in Tregopathies and other IEI including Treg subpopulation changes, genotype-phenotype correlation, Treg changes with disease activity, and available therapies, and C) the potential of Treg cell-based therapies for IEI with immune dysregulation. The aim is to improve both the diagnostic and the therapeutic approaches to IEI when there is involvement of Treg. We performed a non-systematic targeted literature review with a knowledgeable selection of current, high-quality original and review articles on Treg and IEI available since 2003 (with 58% of the articles within the last 6 years) in the PubMed database.
Journal Article
Sexual dysfunction worsens both the general and specific quality of life of women with irritable bowel syndrome. A cross-sectional study
by
Díaz, Andrea
,
Murguía, Daniel
,
Camacho, Santiago
in
Comorbidity
,
Cross-Sectional Studies
,
Demographic aspects
2023
Background
Irritable bowel syndrome (IBS) and sexual dysfunction (SxD) lowers quality of life (QOL) separately, but the effect of their overlap in unselected populations has not been studied.
Objective
To evaluate the QOL of IBS women with and without SxD and compare it with controls.
Methods
In this cross-sectional assessment, we studied 51 IBS women (Rome IV criteria) and 54 controls. SxD was determined using the female sexual function index questionnaire. QOL was evaluated by the Short Form 36 (SF-36) and IBS-QOL questionnaires.
Results
SxD prevalence was similar between IBS women (39.22%) and controls (38.89%). Compared with other groups, IBS patients with SxD showed lower scores in all domains as well as in the physical, mental summaries of the SF-36 and almost all domains (except for body image, food avoidance, and social reaction compared with IBS patients without SxD) and the total score of IBS-QOL.
Conclusions
These findings show that SxD worsens both general and specific QOL of women with IBS. The consideration of SxD in patients with IBS will allow us to make a more effective diagnostic and therapeutic approach. Clinical trial registry in Mexico City General Hospital: DI/19/107/03/080. Clinical trials registration: NCT04716738.
Journal Article
Assessing controls on the displacement of tracers in gravel-bed rivers
2019
Particle travel length is one of the main dimensions of bedload and strongly influences river morpho-dynamics, particularly when exploring the interactions between sediment transport and channel morphology. This process has been traditionally studied by using tagged stones that allow tracking the movement experienced by individual grains during transport episodes. In this paper, we relate measured particle travel lengths to flow metrics and river channel parameters. First, we link the event-based bedload volumes to the active-layer dimensions, and the product between the average bedload rates and the duration of competent flows. We then hypothesize that travel length depends on channel width, surface grain-size, particle size, bed structure, flow strength, and duration of competent flow. The results from this approach are, subsequently, tested with a set of tracer observations from eight rivers that were available in the literature. The relationship between travel length and flow metrics was found to be statistically strong and has the potential to allow us to quantitatively assess the one-day dynamics of particles moving along streambeds. We also analyzed the influence of channel morphology and bed structure and identified morphological signatures for particle transport in gravel-bed rivers.
Journal Article
Spray-dried microencapsulation of bean coat flour (Phaselus vulgaris, L.) bioactive compounds: optimization, functional activity, and storage
by
Cruz-Bravo, Raquel Karina
,
Díaz-Batalla, Luis
,
Falfán-Cortés, Reyna Nallely
in
Air intakes
,
Air temperature
,
anthocyanins
2023
Common beans are a source of phenolic compounds. However, they are sensitive to different factors. Microencapsulation may protect those bioactive compounds (BC). Hence, it is important to study the effects of microencapsulation and increase BC stability. A mix of methanolic extract of bean coat flour was prepared with N-lok as wall material. Inlet air temperature and total solids of wall material were evaluated. Air inlet temperature (115°C) and 28.54% total solids were the optimal conditions for the drying process, obtaining the highest concentration of BC. The particle size of microcapsules was ≈20 μm, and microencapsulation efficiency reached 96.29%. The stability conditions at two temperatures (30°C and 7°C) and two water activities (0.329 and 0.765) showed that encapsulation maintained BC stability in time as compared to control. The bean coat extract can be used as a functional microencapsulate with high BC content in the food and pharmaceutical sectors.
Journal Article
Molecular typing of Strongyloides stercoralis in Latin America, the clinical connection
by
Sierra, Mariela Fernanda
,
Radisic, Marcelo Víctor
,
Stecher, Daniel Ricardo
in
Animals
,
Asia
,
Asymptomatic
2022
This study analysed Strongyloides stercoralis genetic variability based on a 404 bp region of the cox1 gene from Latin-American samples in a clinical context including epidemiological, diagnosis and follow-up variables. A prospective, descriptive, observational study was conducted to evaluate clinical and parasitological evolution after ivermectin treatment of 41 patients infected with S. stercoralis. Reactivation of the disease was defined both by clinical symptoms appearance and/or direct larvae detection 30 days after treatment or later. We described 10 haplotypes organized in two clusters. Most frequent variants were also described in the Asian continent in human (HP24 and HP93) and canine (HP24) samples. Clinical presentation (intestinal, severe, cutaneous and asymptomatic), immunological status and eosinophil count were not associated with specific haplotypes or clusters. Nevertheless, presence of cluster 1 haplotypes during diagnosis increased the risk of reactivation with an odds ratio (OR) of 7.51 [confidence interval (CI) 95% 1.38–44.29, P = 0.026]. In contrast, reactivation probability was 83 times lower if cluster 2 (I152V mutation) was detected (OR = 0.17, CI 95% 0.02–0.80, P = 0.02). This is the first analysis of S. stercoralis cox1 diversity in the clinical context. Determination of clusters during the diagnosis could facilitate and improve the design of follow-up strategies to prevent severe reactivations of this chronic disease.
Journal Article
Current Perspectives on the Clinical Research and Medicalization of Psychedelic Drugs for Addiction Treatments: Safety, Efficacy, Limitations and Challenges
by
Stefaniuk, Joanna
,
Idrees Chaudhary, Nazish
,
Folch-Sanchez, Daniel
in
Alcohol
,
Biomedical Research
,
Clinical trials
2024
Mental health disorders and substance use disorders (SUDs) in particular, contribute greatly to the global burden of disease. Psychedelics, including entactogens and dissociative substances, are currently being explored for the treatment of SUDs, yet with less empirical clinical evidence than for other mental health disorders, such as depression or post-traumatic stress disorder (PTSD). In this narrative review, we discuss the current clinical research evidence, therapeutic potential and safety of psilocybin, lysergic acid diethylamide (LSD), ketamine, 3,4-methylenedioxymethamphetamine (MDMA) and ibogaine, particularly in the context of the SUD treatment. Our aim was to provide a balanced overview of the current research and findings on potential benefits and harms of psychedelics in clinical settings for SUD treatment. We highlight the need for more clinical research in this particular treatment area and point out some limitations and challenges to be addressed in future research.
Journal Article