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846 result(s) for "Becker, Matthew"
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Applied machine learning as a driver for polymeric biomaterials design
Polymers are ubiquitous to almost every aspect of modern society and their use in medical products is similarly pervasive. Despite this, the diversity in commercial polymers used in medicine is stunningly low. Considerable time and resources have been extended over the years towards the development of new polymeric biomaterials which address unmet needs left by the current generation of medical-grade polymers. Machine learning (ML) presents an unprecedented opportunity in this field to bypass the need for trial-and-error synthesis, thus reducing the time and resources invested into new discoveries critical for advancing medical treatments. Current efforts pioneering applied ML in polymer design have employed combinatorial and high throughput experimental design to address data availability concerns. However, the lack of available and standardized characterization of parameters relevant to medicine, including degradation time and biocompatibility, represents a nearly insurmountable obstacle to ML-aided design of biomaterials. Herein, we identify a gap at the intersection of applied ML and biomedical polymer design, highlight current works at this junction more broadly and provide an outlook on challenges and future directions. The design of polymers for regenerative medicine could be accelerated with the help of machine learning. Here the authors note that machine learning has been applied successfully in other areas of polymer chemistry, while highlighting that data limitations must be overcome to enable widespread adoption within polymeric biomaterials.
Characterization of Aquifer Poroelastic Response to Impulse and Oscillatory Well Pressure Using Distributed Acoustic Sensing
The storage of fluids in the subsurface is critical for a broad spectrum of applications including managed aquifer recharge, storage of liquefied carbon dioxide and hydrogen, geothermal heat extraction and exploitation of hydrocarbon. It is surprising then, that there has been relatively little measurement of the vertical distribution of poroelastic storage in geologic formations as compared with permeability. We present experiments in which fluid was injected into an important regional aquifer and the depth‐dependent strain response measured using fiber optic distributed acoustic sensing. The formation expansion and contraction in response to fluid injection were several 100 nanostrain. Strain, and the implied storage distribution, was highly localized in specific strata and demonstrated complex, hydromechanical behavior. This new window into fluid‐geomechanical coupling undermines some typically use models and observations currently in practice, but provides potential for complete representation and prediction of fluid storage in the subsurface. Plain Language Summary A fiber optic cable was used to measure strain in response to water injection and withdrawal in a sandstone aquifer. The strain was found to be focused in limited strata within the aquifer. In some strata, the formation expanded with injection, and in others the formation contracted with injection. This complex behavior is attributed to the interaction between fluid flow and mechanical strain in the porous rock and is contrary to common models of water storage which predict a proportionate expansion of pore space with injection. These results provide important insight into understanding transient flow response to impulse and oscillatory pressure loading of the well. Key Points Strain and flow direction was correlated or anti‐correlated with injection head, depending on injection interval Injection and strain behavior was not simply correlated to geophysical or lithologic logs Dynamic injection/withdrawal tests are of limited predictive value to managed aquifer recharge
Degradable polymeric vehicles for postoperative pain management
Effective control of pain management has the potential to significantly decrease the need for prescription opioids following a surgical procedure. While extended release products for pain management are available commercially, the implementation of a device that safely and reliably provides extended analgesia and is sufficiently flexible to facilitate a diverse array of release profiles would serve to advance patient comfort, quality of care and compliance following surgical procedures. Herein, we review current polymeric systems that could be utilized in new, controlled post-operative pain management devices and highlight where opportunities for improvement exist. Pain management is an extremely important topic both medically and socio-economically. Here the authors offer an overview of the use of degrading polymeric materials for delivery of pharmaceutical agents for pain management and offer a perspective of the future directions of the field.
Spatial Risk Effects From Lions Compound Impacts of Prey Depletion on African Wild Dogs
Prey depletion threatens many carnivore species across the world and can especially threaten low‐density subordinate competitors, particularly if subordinates are limited to low densities by their dominant competitors. Understanding the mechanisms that drive responses of carnivore density to prey depletion is not only crucial for conservation but also elucidates the balance between top‐down and bottom‐up limitations within the large carnivore guild. To avoid predation, competitively subordinate African wild dogs typically avoid their dominant competitors (lions) and the prey rich areas they are associated with, but no prior research has tested whether this pattern persists in ecosystems with anthropogenically‐reduced prey density, and reduced lion density as a result. We used spatial data from wild dogs and lions in the prey‐depleted Greater Kafue Ecosystem to test if wild dogs continue to avoid lions (despite their low density), and consequently avoid habitats with higher densities of their dominant prey species. We found that although lion density is 3X lower than comparable ecosystems, wild dogs continue to strongly avoid lions, and consequently avoid habitats associated with their two most important prey species. Although the density of lions in the GKE is low due to prey depletion, their competitive effects on wild dogs remain strong. These effects are likely compounded by prey‐base homogenization, as lions in the GKE now rely heavily on the same prey preferred by wild dogs. These results suggest that a reduction in lion density does not necessarily reduce competition, and helps explain why wild dogs decline in parallel with their dominant competitors in ecosystems suffering from anthropogenic prey depletion. Protecting prey populations within the few remaining strongholds for wild dogs is vitally important to avoid substantial population declines. Globally, understanding the impacts of prey depletion on carnivore guild dynamics should be an increasingly important area of focus for conservation. Spatial avoidance of lions by wild dogs has never been tested in a prey and lion‐depleted ecosystem. We found that wild dogs continue to avoid lions and prey even though both have been reduced. Mechanistically, this helps to explain the lack of competitive release of wild dog populations when lions are reduced as a result of prey depletion.
Cerebellar associative learning underlies skilled reach adaptation
The cerebellum is hypothesized to refine movement through online adjustments. We examined how such predictive control may be generated using a mouse reach paradigm, testing whether the cerebellum uses within-reach information as a predictor to adjust reach kinematics. We first identified a population-level response in Purkinje cells that scales inversely with reach velocity, pointing to the cerebellar cortex as a potential site linking kinematic predictors and anticipatory control. Next, we showed that mice can learn to compensate for a predictable reach perturbation caused by repeated, closed-loop optogenetic stimulation of pontocerebellar mossy fiber inputs. Both neural and behavioral readouts showed adaptation to position-locked mossy fiber perturbations and exhibited aftereffects when stimulation was removed. Surprisingly, position-randomized stimulation schedules drove partial adaptation but no opposing aftereffects. A model that recapitulated these findings suggests that the cerebellum may decipher cause-and-effect relationships through time-dependent generalization mechanisms. This study tests a key hypothesis of cerebellar motor correction, showing that inputs to the cerebellum that drive errors during skilled movements are rapidly adjusted over trials to enhance motor accuracy.
Distributed Acoustic Sensing of Strain at Earth Tide Frequencies
The solid Earth strains in response to the gravitational pull from the Moon, Sun, and other planetary bodies. Measuring the flexure of geologic material in response to these Earth tides provides information about the geomechanical properties of rock and sediment. Such measurements are particularly useful for understanding dilation of faults and fractures in competent rock. A new approach to measuring earth tides using fiber optic distributed acoustic sensing (DAS) is presented here. DAS was originally designed to record acoustic vibration through the measurement of dynamic strain on a fiber optic cable. Here, laboratory experiments demonstrate that oscillating strain can be measured with DAS in the microHertz frequency range, corresponding to half-day (M2) lunar tidal cycles. Although the magnitude of strain measured in the laboratory is larger than what would be expected due to earth tides, a clear signal at half-day period was extracted from the data. With the increased signal-to-noise expected from quiet field applications and improvements to DAS using engineered fiber, earth tides could potentially be measured in deep boreholes with DAS. Because of the distributed nature of the sensor (0.25 m measurement interval over kilometres), fractures could be simultaneously located and evaluated. Such measurements would provide valuable information regarding the placement and stiffness of open fractures in bedrock. Characterization of bedrock fractures is an important goal for multiple subsurface operations such as petroleum extraction, geothermal energy recovery, and geologic carbon sequestration.
An Ethnic Security Dilemma in Bosnia-Herzegovina: Civic Pride and Civics Education
This article attempts to explore the link between education and democracy. Education is supposed to serve as a unifying factor and socialization agent among citizens of a state; teaching them who they are and what their country expects of them. The role of the educational system is important for the state in building a civic identity and patriotism among students. In Bosnia-Herzegovina (BiH), students complete a “Democracy and Human Rights” civics education course in primary and secondary schools; however, the current pedagogical implementation of instilling a civic identity is low, with little attention paid to civic identity promotion. This article examines the notions of civic pride and education among high school seniors in BiH via statistical analysis of original field data (n=5,749 surveys; 78 high schools in 53 towns). Identity politics and ethnic saliency are explored, with concluding views on the lack of (perceived) rights among the Croat student population. Cross-cutting cleavages and interpersonal trust are low, with the ethnic promoted over the civic.
Spatial and temporal avoidance of risk within a large carnivore guild
Within a large carnivore guild, subordinate competitors (African wild dog, Lycaon pictus, and cheetah, Acinonyx jubatus) might reduce the limiting effects of dominant competitors (lion, Panthera leo, and spotted hyena, Crocuta crocuta) by avoiding them in space, in time, or through patterns of prey selection. Understanding how these competitors cope with one other can inform strategies for their conservation. We tested how mechanisms of niche partitioning promote coexistence by quantifying patterns of prey selection and the use of space and time by all members of the large carnivore guild within Liuwa Plain National Park in western Zambia. Lions and hyenas specialized on wildebeest, whereas wild dogs and cheetahs selected broader diets including smaller and less abundant prey. Spatially, cheetahs showed no detectable avoidance of areas heavily used by dominant competitors, but wild dogs avoided areas heavily used by lions. Temporally, the proportion of kills by lions and hyenas did not detectably differ across four time periods (day, crepuscular, early night, and late night), but wild dogs and especially cheetahs concentrated on time windows that avoided nighttime hunting by lions and hyenas. Our results provide new insight into the conditions under which partitioning may not allow for coexistence for one subordinate species, the African wild dog, while it does for cheetah. Because of differences in responses to dominant competitors, African wild dogs may be more prone to competitive exclusion (local extirpation), particularly in open, uniform ecosystems with simple (often wildebeest dominated) prey communities, where spatial avoidance is difficult. Utilization distributions for each pair of species for which we tested associations. In each panel, the outline denotes the boundaries of the 1,200‐km2 focal study area, and the intensity of color indicates intensity of use.
High-speed, scanned laser structuring of multi-layered eco/bioresorbable materials for advanced electronic systems
Physically transient forms of electronics enable unique classes of technologies, ranging from biomedical implants that disappear through processes of bioresorption after serving a clinical need to internet-of-things devices that harmlessly dissolve into the environment following a relevant period of use. Here, we develop a sustainable manufacturing pathway, based on ultrafast pulsed laser ablation, that can support high-volume, cost-effective manipulation of a diverse collection of organic and inorganic materials, each designed to degrade by hydrolysis or enzymatic activity, into patterned, multi-layered architectures with high resolution and accurate overlay registration. The technology can operate in patterning, thinning and/or cutting modes with (ultra)thin eco/bioresorbable materials of different types of semiconductors, dielectrics, and conductors on flexible substrates. Component-level demonstrations span passive and active devices, including diodes and field-effect transistors. Patterning these devices into interconnected layouts yields functional systems, as illustrated in examples that range from wireless implants as monitors of neural and cardiac activity, to thermal probes of microvascular flow, and multi-electrode arrays for biopotential sensing. These advances create important processing options for eco/bioresorbable materials and associated electronic systems, with immediate applicability across nearly all types of bioelectronic studies. Designing and manufacturing eco/bioresorbable electronic systems remains a challenge. The authors introduce a picosecond-pulsed laser-based scheme that exploits controlled patterning, thinning, and/or cutting to manipulate multilayers of eco/bioresorbable materials for a wide range of advanced electronic systems.
Cutaneous Bacteria of the Redback Salamander Prevent Morbidity Associated with a Lethal Disease
Chytridiomycosis, caused by the fungal pathogen Batrachochytrium dendrobatidis (Bd), is an infectious disease that causes population declines of many amphibians. Cutaneous bacteria isolated from redback salamanders, Plethodon cinereus, and mountain yellow-legged frogs, Rana muscosa, inhibit the growth of Bd in vitro. In this study, the bacterial community present on the skin of P. cinereus individuals was investigated to determine if it provides protection to salamanders from the lethal and sub-lethal effects of chytridiomycosis. When the cutaneous bacterial community was reduced prior to Bd exposure, salamanders experienced a significantly greater decrease in body mass, which is a symptom of the disease, when compared to infected individuals with a normal bacterial community. In addition, a greater proportion of infected individuals with a reduced bacterial community experienced limb-lifting, a behavior seen only in infected individuals. Overall, these results demonstrate that the cutaneous bacterial community of P. cinereus provides protection to the salamander from Bd and that alteration of this community can change disease resistance. Therefore, symbiotic microbes associated with this species appear to be an important component of its innate skin defenses.