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"Behme, Daniel"
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Comparison of CT-perfusion software packages and validation with true infarct core in patients with acute ischemic stroke
by
Klebingat, Stefan
,
Faltass, Maria
,
Behme, Daniel
in
Acute ischemic stroke
,
Aged
,
Aged, 80 and over
2025
Background
Computed tomography perfusion (CTP) is widely used to evaluate acute ischemic stroke (AIS) and guide endovascular thrombectomy (MT). However, substantial variability exists among software solutions in estimating ischemic core volume, potentially affecting patient selection and treatment outcomes.
Materials and methods
We retrospectively analyzed 65 patients with M1/M2 occlusions who underwent successful MT (TICI 2c/3). All patients had baseline CTP and follow-up non-contrast CT (ncCCT) within 10–25 h. Final infarct volumes were segmented on ncCCT. CTP data were processed using syngo.via (Siemens Healthcare) with three settings (A: CBV < 1.2 ml/100 ml; B: same threshold plus smoothing; C: rCBF < 30%) and Cercare Medical Neurosuite (CMN, Cercare Medical). We compared software-derived core volumes to ncCCT -measured volumes using Wilcoxon-Signed-Rank tests, Bland–Altman analyses, and intraclass correlation coefficients.
Results
CMN showed the smallest median error (0.0 ml) and a 50.0% rate of overestimation. Among syngo.via settings, method B had improved agreement but still tended to overestimate infarct volume in larger strokes. Settings A and C more frequently produced substantial overestimations. Bland–Altman plots demonstrated that deviations from true infarct volumes increased with larger cores for all software packages, underscoring the challenge of accurately quantifying extensive ischemic lesions.
Conclusion
Our findings reveal marked variability in core volume estimates across different CTP software solutions. CMN and syngo.via B provided good accuracy, but performance declined with larger infarcts. Awareness of these discrepancies is critical for clinicians interpreting perfusion maps to optimize AIS treatment decisions and avoid misclassification of patients who might still benefit from reperfusion therapy.
Journal Article
Automated brain segmentation and volumetry in dementia diagnostics: a narrative review with emphasis on FreeSurfer
by
Behme, Daniel
,
Henkes, Hans
,
Müller, Sebastian Johannes
in
Aging Neuroscience
,
dementia
,
FreeSurfer
2024
BackgroundDementia can be caused by numerous different diseases that present variable clinical courses and reveal multiple patterns of brain atrophy, making its accurate early diagnosis by conventional examinative means challenging. Although highly accurate and powerful, magnetic resonance imaging (MRI) currently plays only a supportive role in dementia diagnosis, largely due to the enormous volume and diversity of data it generates. AI-based software solutions/algorithms that can perform automated segmentation and volumetry analyses of MRI data are being increasingly used to address this issue. Numerous commercial and non-commercial software solutions for automated brain segmentation and volumetry exist, with FreeSurfer being the most frequently used.ObjectivesThis Review is an account of the current situation regarding the application of automated brain segmentation and volumetry to dementia diagnosis.MethodsWe performed a PubMed search for “FreeSurfer AND Dementia” and obtained 493 results. Based on these search results, we conducted an in-depth source analysis to identify additional publications, software tools, and methods. Studies were analyzed for design, patient collective, and for statistical evaluation (mathematical methods, correlations).ResultsIn the studies identified, the main diseases and cohorts represented were Alzheimer’s disease (n = 276), mild cognitive impairment (n = 157), frontotemporal dementia (n = 34), Parkinson’s disease (n = 29), dementia with Lewy bodies (n = 20), and healthy controls (n = 356). The findings and methods of a selection of the studies identified were summarized and discussed.ConclusionOur evaluation showed that, while a large number of studies and software solutions are available, many diseases are underrepresented in terms of their incidence. There is therefore plenty of scope for targeted research.
Journal Article
Predictive modeling and machine learning show poor performance of clinical, morphological, and hemodynamic parameters for small intracranial aneurysm rupture
by
Sandalcioglu, I. Erol
,
Swiatek, Vanessa M.
,
Kader, Hafez
in
631/378/2607
,
692/308/409
,
692/617/375/1370/534
2025
Small intracranial aneurysms (SIAs) (< 5 mm) are increasingly detected due to advanced imaging, but predicting rupture risk remains challenging. Rupture, though rare, can cause devastating subarachnoid hemorrhage. This study analyzed 141 SIAs (101 unruptured, 40 ruptured) using semi-automatic morphological analysis and high-resolution, image-based blood flow simulations from 3D rotational angiography. Advanced morphological and hemodynamic parameters were extracted, with clustering applied to address multicollinearity. Univariate logistic regression identified cluster representatives, and forward selection highlighted the maximum height, Neck inflow rate, and Non-sphericity index as rupture predictors, though only the latter two were significant. Clinical variables like age, sex, and comorbidities were also assessed but failed to predict rupture risk. The full model showed overfitting, with a pseudo-R
2
of 0.142 on the training set but only 0.032 on the test set. A simplified model using just Neck inflow rate and Non-sphericity index performed similarly poorly (pseudo-R
2
of 0.034). Multiple machine learning classifiers were evaluated, with similar performance across models, supporting the model-independence of the results. Overall, neither morphological, hemodynamic, nor clinical variables reliably predicted rupture risk, highlighting the limitations of current methods and underscoring the need for prospective studies and multimodal approaches that integrate imaging biomarkers and compare small and large aneurysms for better risk stratification.
Journal Article
Complications of mechanical thrombectomy for acute ischemic stroke—a retrospective single-center study of 176 consecutive cases
2014
Introduction
There is only very limited data about complications in mechanical thrombectomy for acute ischemic stroke. The purpose of this study was to evaluate the frequency and the clinical relevance of procedure-related complications in mechanical thrombectomy.
Methods
We conducted a retrospective analysis of 176 consecutive acute ischemic stroke cases that were treated with mechanical thrombectomy. Primary outcome measures included the following: symptomatic intracranial hemorrhage (sICH), vessel dissection, emboli to new vascular territories, vasospasm, and stent dislocation/occlusion whenever appropriate. Secondary outcome measures included mTICI score, time from symptom onset to revascularization, and time from groin puncture to revascularization as well as the early clinical outcome at discharge.
Results
Complications occurred in 20/176 patients (11 %) comprising 23 adverse events at the following rates: sICH 8/176 (5 %), emboli to new vascular territories 4/176 (2 %); vessel dissection 3/176 (2 %); vasospasm of the access vessel 5/176 (3 %); stent dislocation in 1/42 (2 %); and stent occlusion in 2/42 (5 %). Two out of 20 (10 %) suffered from two or more procedure-related complications. There was a statistically significant correlation of complications with time from groin puncture to revascularization, unfavorable revascularization results, and unfavorable clinical outcome.
Conclusion
Overall, the frequency of procedure-related complications lies within acceptable limits for an emergency procedure. The endovascular treatment does not seem to add significantly to the stroke patients’ risk of sICH but implies an innate risk of stroke in an initially uninvolved territory. Furthermore, a prolonged endovascular procedure beyond an hour is correlated with higher complication rates, which underlines the importance of a swift and complete revascularization.
Journal Article
Comparison of a new MR rapid wash-out map with MR perfusion in brain tumors
by
Paukisch, Harald
,
Schmidt, Leon
,
Hernández-Durán, Silvia
in
Adult
,
Aged
,
Biomedical and Life Sciences
2024
Background
MR perfusion is a standard marker to distinguish progression and therapy-associated changes after surgery and radiochemotherapy for glioblastoma. TRAMs (Treatment Response Assessment Maps) were introduced, which are intended to facilitate the differentiation of vital tumor cells and radiation necrosis by means of late (20–90 min) contrast clearance and enhancement. The differences of MR perfusion and late-enhancement are not fully understood yet.
Methods
We have implemented and established a fully automated creation of rapid wash-out (15–20 min interval) maps in our clinic. We included patients with glioblastoma, CNS lymphoma or brain metastases who underwent our MR protocol with MR perfusion and rapid wash-out between 01/01/2024 and 30/06/2024. Since both wash-out and hyperperfusion are intended to depict the active tumor area, this study involves a quantitative and qualitative comparison of both methods. For this purpose, we volumetrically measured rCBV (relative cerebral blood volume) maps and rapid wash-out maps separately (two raters). Additionally, we rated the agreement between both maps on a Likert scale (0–10).
Results
Thirty-two patients were included in the study: 15 with glioblastoma, 7 with CNS lymphomas and 10 with brain metastasis. We calculated 36 rapid wash-out maps (9 initial diagnosis, 27 follow-up).
Visual agreement of MR perfusion with rapid wash-out by rating were found in 44 ± 40% for initial diagnosis, and 75 ± 31% for follow-up. We found a strong correlation (Pearson coefficient 0.92,
p
< 0.001) between the measured volumes of MR perfusion and rapid wash-out. The measured volumes of MR perfusion and rapid wash-out did not differ significantly. Small lesions were often not detected by MR perfusion. Nevertheless, the measured volumes showed no significant differences in this small cohort.
Conclusions
Rapid wash-out calculation is a simple tool that provides new information and, when used in conjunction with MR perfusion, may increase diagnostic accuracy. The method shows promising results, particularly in the evaluation of small lesions.
Journal Article
The interleukin-11 receptor variant p.W307R results in craniosynostosis in humans
2023
Craniosynostosis is characterized by the premature fusion and ossification of one or more of the sutures of the calvaria, often resulting in abnormal features of the face and the skull. In cases in which growth of the brain supersedes available space within the skull, developmental delay or cognitive impairment can occur. A complex interplay of different cell types and multiple signaling pathways are required for correct craniofacial development. In this study, we report on two siblings with craniosynostosis and a homozygous missense pathogenic variant within the
IL11RA
gene (c.919 T > C; p.W307R). The patients present with craniosynostosis, exophthalmos, delayed tooth eruption, mild platybasia, and a basilar invagination. The p.W307R variant is located within the arginine-tryptophan-zipper within the D3 domain of the IL-11R, a structural element known to be important for the stability of the cytokine receptor. Expression of IL-11R-W307R in cells shows impaired maturation of the IL-11R, no transport to the cell surface and intracellular retention. Accordingly, cells stably expressing IL-11R-W307R do not respond when stimulated with IL-11, arguing for a loss-of-function mutation. In summary, the IL-11R-W307R variant, reported here for the first time to our knowledge, is most likely the causative variant underlying craniosynostosis in these patients.
Journal Article
Anatomical Characteristics of Cervicomedullary Compression on MRI Scans in Children with Achondroplasia
2024
This retrospective study assessed anatomical characteristics of cervicomedullary compression in children with achondroplasia. Twelve anatomical parameters were analyzed (foramen magnum diameter and area; myelon area; clivus length; tentorium and occipital angles; brainstem volume outside the posterior fossa; and posterior fossa, cerebellum, supratentorial ventricular system, intracranial cerebrospinal fluid, and fourth ventricle volumes) from sagittal and transversal T1- and T2-weighted magnetic resonance imaging (MRI) scans from 37 children with achondroplasia aged ≤ 4 years (median [range] 0.8 [0.1–3.6] years) and compared with scans from 37 children without achondroplasia (median age 1.5 [0–3.9] years). Mann–Whitney U testing was used for between-group comparisons. Foramen magnum diameter and area were significantly smaller in children with achondroplasia compared with the reference group (mean 10.0 vs. 16.1 mm [p < 0.001] and 109.0 vs. 160.8 mm2 [p = 0.005], respectively). The tentorial angle was also steeper in children with achondroplasia (mean 47.6 vs. 38.1 degrees; p < 0.001), while the clivus was significantly shorter (mean 23.5 vs. 30.3 mm; p < 0.001). Significant differences were also observed in myelon area, occipital angle, fourth ventricle, intracranial cerebrospinal fluid and supratentorial ventricular volumes, and the volume of brainstem protruding beyond the posterior fossa (all p < 0.05). MRI analysis of brain structures may provide a standardized value to indicate decompression surgery in children with achondroplasia.
Journal Article
Influence of beta-blocker therapy on the risk of infections and death in patients at high risk for stroke induced immunodepression
by
Leyhe, Johanna Rosemarie
,
Becker, Johannes C.
,
Behme, Daniel
in
Adrenergic beta-antagonists
,
Beta blockers
,
Biology and Life Sciences
2018
Stroke-induced immunodepression is a well characterized complication of acute ischemic stroke. In experimental studies beta-blocker therapy reversed stroke-induced immunodepression, reduced infection rates and mortality. Recent, heterogeneous studies in stroke patients could not provide evidence of a protective effect of beta-blocker therapy. Aim of this study is to investigate the potential preventive effect of beta-blockers in subgroups of patients at high risk for stroke-induced immunodepression.
Data from a prospectively derived registry of major stroke patients receiving endovascular therapy between 2011-2017 in a tertiary stroke center (University Medical Center Göttingen. Germany) was used. The effect of beta-blocker therapy on pneumonia, urinary tract infection, sepsis and mortality was assessed using multivariate logistic regression analysis.
Three hundred six patients with a mean age of 72 ± 13 years and a median NIHSS of 16 (IQR 10.75-20) were included. 158 patients (51.6%) had pre-stroke- and continued beta-blocker therapy. Beta-blocker therapy did not reduce the incidence of pneumonia (OR 0.78, 95% CI 0.31-1.92, p = 0.584), urinary tract infections (OR 1.51, 0.88-2.60, p = 0.135), sepsis (OR 0.57, 0.18-1.80, p = 0.334) or mortality (OR 0.59, 0.16-2.17, p = 0.429). Strokes involving the insula and anterio-medial cortex increased the risk for pneumonia (OR 4.55, 2.41-8.56, p<0.001) and sepsis (OR 4.13, 1.81-9.43, p = 0.001), while right hemispheric strokes increased the risk for pneumonia (OR 1.60, 0.92-2.77, p = 0.096). There was a non-significantly increased risk for urinary tract infections in patients with beta-blocker therapy and insula/anterio-medial cortex strokes (OR 3.12, 95% CI 0.88-11.05, p = 0.077) with no effect of beta-blocker therapy on pneumonia, sepsis or mortality in both subgroups.
In major ischemic stroke patients, beta-blocker therapy did not lower post-stroke infection rates and was associated with urinary tract infections in a subgroup with insula/anterio-medial strokes.
Journal Article
Validation of the extended thrombolysis in cerebral infarction score in a real world cohort
by
Liebeskind, David S.
,
Hesse, Amélie C.
,
Tsogkas, Ioannis
in
Aged
,
Aged, 80 and over
,
Biology and Life Sciences
2019
A thrombolysis in cerebral infarction (TICI) score of 2b is defined as a good recanalization result although the reperfusion may only cover 50% of the affected territory. An additional mTICI2c category was introduced to further differentiate between mTICI scores. Despite the new mTICI2c category, mTICI2b still covers a range of 50-90% reperfusion which might be too imprecise to predict neurological improvement after therapy.
To compare the 7-point \"expanded TICI\" (eTICI) scale with the traditional mTICI in regard to predict functional independence at 90 days.
Retrospective review of 225 patients with large artery occlusion. Angiograms were graded by 2 readers according the 7-point eTICI score (0% = eTICI0; reduced clot = eTICI1; 1-49% = eTICI2a, 50-66% = eTICI2b50; 67-89% = eTICI2b67, 90-99% = eTICI2c and complete reperfusion = eTICI3) and the conventional mTICI score. The ability of e- and mTICI to predict favorable outcome at 90days was compared.
Given the ROC analysis eTICI was the better predictor of favorable outcome (p-value 0.047). Additionally, eTICI scores 2b50, 2b67 and 2c (former mTICI2b) were significantly superior at predicting the probability of a favorable outcome at 90 days after endovascular therapy with a p-value of 0.033 (probabilities of 17% for mTICI2b50, 24% for mTICI2b67 and 54% for mTICI2c vs. 36% for mTICI2b).
The 7-point eTICI allows for a more accurate outcome prediction compared to the mTICI score because it refines the broad range of former mTICI2b results.
Journal Article
Calculation of virtual 3D subtraction angiographies using conditional generative adversarial networks (cGANs)
by
Zubel, Seraphine
,
Khadhraoui, Eya
,
Schwab, Roland
in
3D rotational angiography
,
Aged
,
Analysis
2024
Objective
Subtraction angiographies are calculated using a native and a contrast-enhanced 3D angiography images. This minimizes both bone and metal artifacts and results in a pure image of the vessels. However, carrying out the examination twice means double the radiation dose for the patient. With the help of generative AI, it could be possible to simulate subtraction angiographies from contrast-enhanced 3D angiographies and thus reduce the need for another dose of radiation without a cutback in quality. We implemented this concept by using conditional generative adversarial networks.
Methods
We selected all 3D subtraction angiographies from our PACS system, which had performed between 01/01/2018 and 12/31/2022 and randomly divided them into training, validation, and test sets (66%:17%:17%). We adapted the pix2pix framework to work on 3D data and trained a conditional generative adversarial network with 621 data sets. Additionally, we used 158 data sets for validation and 164 for testing. We evaluated two test sets with (
n
= 72) and without artifacts (
n
= 92). Five (blinded) neuroradiologists compared these datasets with the original subtraction dataset. They assessed similarity, subjective image quality, and severity of artifacts.
Results
Image quality and subjective diagnostic accuracy of the virtual subtraction angiographies revealed no significant differences compared to the original 3D angiographies. While bone and movement artifact level were reduced, artifact level caused by metal implants differed from case to case between both angiographies without one group being significant superior to the other.
Conclusion
Conditional generative adversarial networks can be used to simulate subtraction angiographies in clinical practice, however, new artifacts can also appear as a result of this technology.
Journal Article