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result(s) for
"Bentley, Lisa Patrick"
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Predicting trait-environment relationships for venation networks along an Andes-Amazon elevation gradient
by
Goldsmith, Gregory R
,
Salinas, Norma
,
Patrick Bentley, Lisa
in
Abundance
,
abundance‐weighting
,
altitude
2017
Understanding functional trait-environment relationships (TERs) may improve predictions of community assembly. However, many empirical TERs have been weak or lacking conceptual foundation. TERs based on leaf venation networks may better link individuals and communities via hydraulic constraints. We report measurements of vein density, vein radius, and leaf thickness for more than 100 dominant species occurring in ten forest communities spanning a 3,300 m Andes-Amazon elevation gradient in Peru. We use these data to measure the strength of TERs at community scale and to determine whether observed TERs are similar to those predicted by physiological theory. We found strong support for TERs between all traits and temperature, as well weaker support for a predicted TER between maximum abundance-weighted leaf transpiration rate and maximum potential evapotranspiration. These results provide one approach for developing a more mechanistic trait-based community assembly theory.
Journal Article
lacunr: Efficient 3D lacunarity for voxelized LiDAR data from forested ecosystems
by
Bentley, Lisa Patrick
,
Cooper, Zane
,
Smeds, Elliott A.
in
Biodiversity
,
Complexity
,
Computer applications
2025
Structural complexity has been considered a key driver of ecological phenomena in forested ecosystems. Geographic metrics that attempt to summarize the heterogeneity of complex 3‐dimensional (3D) spatial structures, such as fractal dimension and rugosity, provide insights into ecological processes such as biodiversity, productivity and resilience. Lacunarity is a popular metric for quantifying the spatial heterogeneity of 2‐dimensional data via determining the texture associated with patterns of spatial dispersion. Given the widespread availability of 3D remote sensing data, it is beneficial to increase the scaling efficiency of existing computational algorithms to make lacunarity calculations feasible for voxelized LiDAR data. We present an open‐source software package ‘lacunr’, written in the R programming language, which allows for efficient calculation of 3D lacunarity using LiDAR point clouds, with specific emphasis on forest stands. It includes tools to process point clouds into voxel data and 3D spatial maps and facilitates rapid visualization of lacunarity curves via built‐in plotting functions. ‘lacunr’ is applicable to LiDAR data regardless of collection method (e.g. terrestrial or airborne), as it only requires a point cloud with XYZ data for use. This makes it accessible for a wide range of users, specifically ecologists and foresters. ‘lacunr’ can easily be integrated into existing data‐analysis workflows for LiDAR data and removes a significant computational barrier previously hindering calculations of lacunarity using 3D point clouds.
Journal Article
Temperature response surfaces for mortality risk of tree species with future drought
by
McDowell, Nate G
,
Adams, Henry D
,
Bentley, Lisa Patrick
in
Anthropogenic factors
,
Climate change
,
climate change ecology
2017
Widespread, high levels of tree mortality, termed forest die-off, associated with drought and rising temperatures, are disrupting forests worldwide. Drought will likely become more frequent with climate change, but even without more frequent drought, higher temperatures can exacerbate tree water stress. The temperature sensitivity of drought-induced mortality of tree species has been evaluated experimentally for only single-step changes in temperature (ambient compared to ambient + increase) rather than as a response surface (multiple levels of temperature increase), which constrains our ability to relate changes in the driver with the biological response. Here we show that time-to-mortality during drought for seedlings of two western United States tree species, Pinus edulis (Engelm.) and Pinus ponderosa (Douglas ex C. Lawson), declined in continuous proportion with increasing temperature spanning a 7.7 °C increase. Although P. edulis outlived P. ponderosa at all temperatures, both species had similar relative declines in time-to-mortality as temperature increased (5.2% per °C for P. edulis; 5.8% per °C for P. ponderosa). When combined with the non-linear frequency distribution of drought duration-many more short droughts than long droughts-these findings point to a progressive increase in mortality events with global change due to warming alone and independent of additional changes in future drought frequency distributions. As such, dire future forest recruitment patterns are projected assuming the calculated 7-9 seedling mortality events per species by 2100 under business-as-usual warming occur, congruent with additional vulnerability predicted for adult trees from stressors like pathogens and pests. Our progressive projection for increased mortality events was driven primarily by the non-linear shape of the drought duration frequency distribution, a common climate feature of drought-affected regions. These results illustrate profound benefits for reducing emissions of carbon to the atmosphere from anthropogenic sources and slowing warming as rapidly as possible to maximize forest persistence.
Journal Article
Assessing Umbellularia californica Basal Resprouting Response Post-Wildfire Using Field Measurements and Ground-Based LiDAR Scanning
2025
In many hardwood forests, resprouting is a common response to disturbance and basal resprouts may represent a substantial component of the forest understory, especially post-wildfire. Despite this, resprouts are often overlooked in biomass assessments and drivers of resprouting responses in certain species are still unknown. These knowledge gaps are problematic as the contribution of resprouts to understory fuel loads are needed for wildfire risk modeling and effective forest stewardship. Here, we validated the handheld mobile laser scanning (HMLS) of basal resprout volume and field measurements of stem count and clump height as methods to estimate the mass of California Bay Laurel (Umbellularia californica) basal resprouts at Pepperwood and Saddle Mountain Preserves, Sonoma County, California. In addition, we examined the role of tree size and wildfire severity in predicting post-wildfire resprouting response. Both field measurements (clump height and stem count) and remote sensing (HMLS-derived volume) effectively estimated dry mass (total, leaf and wood) of U. californica resprouts, but underestimated dry mass for a large resprout. Tree size was a significant factor determining post-wildfire resprouting response at Pepperwood Preserve, while wildfire severity significantly predicted post-wildfire resprout size at Saddle Mountain. These site differences in post-wildfire basal resprouting predictors may be related to the interactions between fire severity, tree size, tree crown topkill, and carbohydrate mobilization and point to the need for additional demographic and physiological research. Monitoring post-wildfire changes in U. californica will deepen our understanding of resprouting dynamics and help provide insights for effective forest stewardship and wildfire risk assessment in fire-prone northern California forests.
Journal Article
The Potential of Multispectral Imagery and 3D Point Clouds from Unoccupied Aerial Systems (UAS) for Monitoring Forest Structure and the Impacts of Wildfire in Mediterranean-Climate Forests
by
Bentley, Lisa Patrick
,
Oliveras Menor, Imma
,
Matley, Corbin
in
Accuracy
,
aerial photogrammetry
,
Aerial photography
2021
Wildfire shapes vegetation assemblages in Mediterranean ecosystems, such as those in the state of California, United States. Successful restorative management of forests in-line with ecologically beneficial fire regimes relies on a thorough understanding of wildfire impacts on forest structure and fuel loads. As these data are often difficult to comprehensively measure on the ground, remote sensing approaches can be used to estimate forest structure and fuel load parameters over large spatial extents. Here, we analyze the capabilities of one such methodology, unoccupied aerial system structure from motion (UAS-SfM) from digital aerial photogrammetry, for mapping forest structure and wildfire impacts in the Mediterranean forests of northern California. To determine the ability of UAS-SfM to map the structure of mixed oak and conifer woodlands and to detect persistent changes caused by fire, we compared UAS-SfM derived metrics of terrain height and canopy structure to pre-fire airborne laser scanning (ALS) measurements. We found that UAS-SfM was able to accurately capture the forest’s upper-canopy structure, but was unable to resolve mid- and below-canopy structure. The addition of a normalized difference vegetation index (NDVI) ground point filter to the DTM generation process improved DTM root-mean-square error (RMSE) by ~1 m with an overall DTM RMSE of 2.12 m. Upper-canopy metrics (max height, 95th percentile height, and 75th percentile height) were highly correlated between ALS and UAS-SfM (r > +0.9), while lower-canopy metrics and metrics of density and vertical variation had little to no similarity. Two years after the 2017 Sonoma County Tubbs fire, we found significant decreases in UAS-SfM metrics of bulk canopy height and NDVI with increasing burn severity, indicating the lasting impact of the fire on vegetation health and structure. These results point to the utility of UAS-SfM as a monitoring tool in Mediterranean forests, especially for post-fire canopy changes and subsequent recovery.
Journal Article
Examining abiotic and biotic factors influencing specimen black oaks (Quercus kelloggii) in northern California to reimplement traditional ecological knowledge and promote ecosystem resilience post-wildfire
by
Purser, Margaret
,
O'Gorman, Cory J.
,
Bentley, Lisa Patrick
in
Abiotic factors
,
Accumulation
,
acorn
2022
California black oak, Quercus kelloggii, plays an important role in the lifeways of many Indigenous tribes throughout California. Native peoples tend black oaks using traditional ecological knowledge (TEK) to encourage the development and proliferation of specimen oaks. These mature, large, full crowned trees provide a disproportionate amount of ecosystem services, including acorns and habitat, when compared to smaller black oaks. Altered approaches to land management and the cessation of frequent low intensity cultural burns places these specimen oaks at risk from encroachment, forest densification, and severe wildfire. This project is a collaboration between academic researchers and a Native Advisory Council to examine abiotic and biotic factors influencing Quercus kelloggii to reimplement traditional ecological knowledge and promote ecosystem resilience post-wildfire. Data were collected from 55 specimen black oaks at Pepperwood Preserve in northeast Sonoma County. Specifically, we classified specimen oak growth habitat by measuring specimen oak crown area and live crown ratio, the size and number of surrounding trees, and amount of surface and ladder fuel loads. The preserve burned in both the Tubbs Fire in 2017 and the Kincade Fire in 2019, the latter of which occurred three months after the completion of the initial data collection. Immediately following the Kincade Fire we measured scorch height and related our abiotic and biotic variables to fire severity. Forest densification was found to have a significant negative effect on both canopy area (p = 0.003) and live crown ratio (p = 0.038) of the specimen oaks. Densification did not affect surface and ladder fuel load accumulation since the Tubbs Fire in October 2017 (p > 0.05). Neither surface and ladder fuels nor forest densification variables significantly affected scorch height on the specimen oaks (p > 0.05) following the Kincade Fire.
Journal Article
Assessing trait-based scaling theory in tropical forests spanning a broad temperature gradient
2017
Aim: Tropical elevation gradients are natural laboratories to assess how changing climate can influence tropical forests. However, there is a need for theory and integrated data collection to scale from traits to ecosystems. We assess predictions of a novel trait-based scaling theory, including whether observed shifts in forest traits across a broad tropical temperature gradient are consistent with local phenotypic optima and adaptive compensation for temperature. Location: An elevation gradient spanning 3,300 m and consisting of thousands of tropical tree trait measures taken from 16 1-ha tropical forest plots in southern Perú, where gross and net primary productivity (GPP and NPP) were measured. Time period: April to November 2013. Major taxa studied: Plants; tropical trees. Methods: We developed theory to scale from traits to communities and ecosystems and tested several predictions. We assessed the covariation between climate, traits, biomass and GPP and NPP. We measured multiple traits linked to variation in tree growth and assessed their frequency distributions within and across the elevation gradient. We paired these trait measures across individuals within 16 forests with simultaneous measures of ecosystem net and gross primary productivity. Results: Consistent with theory, variation in forest NPP and GPP primarily scaled with forest biomass, but the secondary effect of temperature on productivity was much less than expected. This weak temperature dependence appears to reflect directional shifts in several mean community traits that underlie tree growth with decreases in site temperature. Main conclusions: The observed shift in traits of trees that dominate in more cold environments is consistent with an 'adaptive/acclimatory' compensation for the kinetic effects of temperature on leaf photosynthesis and tree growth. Forest trait distributions across the gradient showed overly peaked and skewed distributions, consistent with the importance of local filtering of optimal growth traits and recent shifts in species composition and dominance attributable to warming from climate change. Trait-based scaling theory provides a basis to predict how shifts in climate have and will influence the trait composition and ecosystem functioning of tropical forests.
Journal Article
Variation in leaf wettability traits along a tropical montane elevation gradient
by
Castro-Ccossco, Rosa
,
Goldsmith, Gregory R
,
Martin, Roberta E
in
Altitude
,
climate
,
cloud forest
2017
Leaf wetting is often considered to have negative effects on plant function, such that wet environments may select for leaves with certain leaf surface, morphological, and architectural traits that reduce leaf wettability. However, there is growing recognition that leaf wetting can have positive effects.
We measured variation in two traits, leaf drip tips and leaf water repellency, in a series of nine tropical forest communities occurring along a 3300-m elevation gradient in southern Peru. To extend this climatic gradient, we also assembled published leaf water repellency values from 17 additional sites. We then tested hypotheses for how these traits should vary as a function of climate.
Contrary to expectations, we found that the proportion of species with drip tips did not increase with increasing precipitation. Instead, drip tips increased with increasing temperature. Moreover, leaf water repellency was very low in our sites and the global analysis indicated high repellency only in sites with low precipitation and temperatures.
Our findings suggest that drip tips and repellency may not solely reflect the negative effects of wetting on plant function. Understanding the drivers of leaf wettability traits can provide insight into the effects of leaf wetting on plant, community, and ecosystem function.
Journal Article
Scale dependence of canopy trait distributions along a tropical forest elevation gradient
by
Montoya Pillco, Milenka
,
Salinas, Norma
,
Quispe Huaypar, Katherine
in
Altitude
,
Analytical methods
,
Canopies
2017
Average responses of forest foliar traits to elevation are well understood, but far less is known about trait distributional responses to elevation at multiple ecological scales. This limits our understanding of the ecological scales at which trait variation occurs in response to environmental drivers and change.
We analyzed and compared multiple canopy foliar trait distributions using field sampling and airborne imaging spectroscopy along an Andes-to-Amazon elevation gradient. Field-estimated traits were generated from three community-weighting methods, and remotely sensed estimates of traits were made at three scales defined by sampling grain size and ecological extent.
Field and remote sensing approaches revealed increases in average leaf mass per unit area (LMA), water, nonstructural carbohydrates (NSCs) and polyphenols with increasing elevation. Foliar nutrients and photosynthetic pigments displayed little to no elevation trend. Sample weighting approaches had little impact on field-estimated trait responses to elevation. Plot representativeness of trait distributions at landscape scales decreased with increasing elevation. Remote sensing indicated elevation-dependent increases in trait variance and distributional skew.
Multiscale invariance of LMA, leaf water and NSC mark these traits as candidates for tracking forest responses to changing climate. Trait-based ecological studies can be greatly enhanced with multiscale studies made possible by imaging spectroscopy.
Journal Article
Covariance of Sun and Shade Leaf Traits Along a Tropical Forest Elevation Gradient
2020
Foliar trait adaptation to sun and shade has been extensively studied in the context of photosynthetic performance of plants, focusing on nitrogen allocation, light capture and use
chlorophyll pigments and leaf morphology; however, less is known about the potential sun-shade dichotomy of other functionally important foliar traits. In this study, we measured 19 traits in paired sun and shade leaves along a 3,500-m elevation gradient in southern Peru to test whether the traits differ with canopy position, and to assess if relative differences vary with species composition and/or environmental filters. We found significant sun-shade differences in leaf mass per area (LMA), photosynthetic pigments (Chl ab and Car), and δ
C. Sun-shade offsets among these traits remained constant with elevation, soil substrates, and species compositional changes. However, other foliar traits related to structure and chemical defense, and those defining general metabolic processes, did not differ with canopy position. Our results suggest that whole-canopy function is captured in many traits of sun leaves; however, photosynthesis-related traits must be scaled based on canopy light extinction. These findings show that top-of-canopy measurements of foliar chemistry from spectral remote sensing approaches map directly to whole-canopy foliar traits including shaded leaves that cannot be directly observed from above.
Journal Article