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result(s) for
"Bissonnette, Luc"
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Microfluidic Device for Rapid (<15 min) Automated Microarray Hybridization
by
Jia, Guangyao
,
Zoval, Jim
,
Boissinot, Karel
in
Analytical, structural and metabolic biochemistry
,
Automation
,
Biological and medical sciences
2005
Background: Current hybridization protocols on microarrays are slow and need skilled personnel. Microfluidics is an emerging science that enables the processing of minute volumes of liquids to perform chemical, biochemical, or enzymatic analyzes. The merging of microfluidics and microarray technologies constitutes an elegant solution that will automate and speed up microarray hybridization. Methods: We developed a microfluidic flow cell consisting of a network of chambers and channels molded into a polydimethylsiloxane substrate. The substrate was aligned and reversibly bound to the microarray printed on a standard glass slide to form a functional microfluidic unit. The microfluidic units were placed on an engraved, disc-shaped support fixed on a rotational device. Centrifugal forces drove the sample and buffers directly onto the microarray surface. Results: This microfluidic system increased the hybridization signal by ∼10fold compared with a passive system that made use of 10 times more sample. By means of a 15–min automated hybridization process, performed at room temperature, we demonstrated the discrimination of 4 clinically relevant Staphylococcus species that differ by as little as a single-nucleotide polymorphism. This process included hybridization, washing, rinsing, and drying steps and did not require any purification of target nucleic acids. This platform was sensitive enough to detect 10 PCR-amplified bacterial genomes. Conclusion: This removable microfluidic system for performing microarray hybridization on glass slides is promising for molecular diagnostics and gene profiling.
Journal Article
Lidar-Based Characterization of the Geometry and Structure of Water Clouds
2007
Lidar remote sensing measurements of low-level water clouds in the form of vertical soundings and instantaneous (∼1 min) azimuth-over-elevation scans are reported. Retrievals are made of the liquid water content and effective droplet diameter at the same range, time, and angular resolutions as those of the measurements. The results are presented as time–height plots and two-dimensional horizontal maps of the retrieved parameters. The cloud structure is resolved by calculating histograms, spatial autocorrelation functions, and power spectra. The distribution of the horizontal inhomogeneities is characterized over the size range from 10 to ∼1000 m. The Kolmogorov −5/3 power-law dependence is verified in all cases, but the −5/3 regime is broken into two subregimes that are separated by a sudden increase in the energy density level. The results illustrate how lidars can contribute meaningful information on cloud structure at high spatial and temporal resolutions, in near–real time, and over extended periods of time.
Journal Article
Eliciting Subjective Survival Curves: Lessons from Partial Identification
by
de Bresser, J.
,
Bissonnette, L.
in
Life expectancy
,
Partial identification
,
Subjective expectations
2018
When analyzing data on subjective expectations of continuous outcomes, researchers have access to a limited number of reported probabilities for each respondent from which to construct complete distribution functions. Moreover, reported probabilities may be rounded and thus not equal to true beliefs. Using survival expectations elicited from a representative sample from the Netherlands, we investigate what can be learned if we take these two sources of missing information into account and expectations are therefore only partially identified. We find novel evidence for rounding by checking whether reported expectations are consistent with a hazard of death that increases weakly with age. Only 39% of reported beliefs are consistent with this under the assumption that all probabilities are reported precisely, while 92% are if we allow for rounding. Using the available information to construct bounds on subjective life expectancy, we show that the data alone are not sufficiently informative to allow for useful inference in partially identified linear models, even in the absence of rounding. We propose to improve precision by interpolation between rounded probabilities. Interpolation in combination with a limited amount of rounding does yield informative intervals.
Journal Article
Range–Height Scans of Lidar Depolarization for Characterizing Properties and Phase of Clouds and Precipitation
2001
Backscatter and depolarization lidar measurements from clouds and precipitation are reported as functions of the elevation angle of the pointing lidar direction. The data were recorded by scanning the lidar beam (Nd:YAG) at a constant angular speed of ~3.5degrees s(-1) while operating at a repetition rate of 10 Hz.
Journal Article
Heterogeneity in consumers’ income and pension expectations
2015
The expectations of economic agents play a crucial role in almost any inter-temporal economic model. Using 2009–12 panel data for a representative sample of the Dutch population, we analyze consumers’ income and pension expectations. We focus on heterogeneity across socioeconomic groups and associations with how consumers perceive the economic and financial crisis. We find that pension expectations become more pessimistic over the 4 years, in line with pension reforms and the crisis. We find substantial differences across groups that are generally plausible and in line with financial theory.
Journal Article
Flexible Approximation of Subjective Expectations Using Probability Questions
by
Kröger, Sabine
,
Bellemare, Charles
,
Bissonnette, Luc
in
Approximation
,
Approximation of subjective probability distribution
,
Censored data
2012
We propose a flexible method to approximate the subjective cumulative distribution function of an economic agent about the future realization of a continuous random variable. The method can closely approximate a wide variety of distributions while maintaining weak assumptions on the shape of distribution functions. We show how moments and quantiles of general functions of the random variable can be computed analytically and/or numerically. We illustrate the method by revisiting the determinants of income expectations in the United States. A Monte Carlo analysis suggests that a quantile-based flexible approach can be used to successfully deal with censoring and possible rounding levels present in the data. Finally, our analysis suggests that the performance of our flexible approach matches that of a correctly specified parametric approach and is clearly better than that of a misspecified parametric approach.
Journal Article
Role and future applications of extracellular vesicles in HIV-1 pathogenesis
by
Gilbert, Caroline
,
Barbeau, Benoit
,
Subra, Caroline
in
Acquired immune deficiency syndrome
,
AIDS
,
Apoptosis
2015
Extracellular vesicles (EVs) are released naturally
and
from cells and tissues into biological fluids such as plasma, urine, saliva and amniotic fluid, and into culture medium. EV may contain proteins, lipids, mRNA and miRNA significant of the physiological status or of their cellular origin and affect the functions of neighboring cells. The characterization of EVs present in HIV-1-infected individuals provides insight into pathogenesis, inflammation and disease progression. However, the potential of EVs to become reliable research or diagnostic tools is currently limited by the difficulty of distinguishing apoptotic and plasma membrane EVs, exosomes and virions. In spite of this methodological limitation, EVs are expected to become highly useful tools in biomedicine and uncover a research area expected to lead to innovative R&D.
Journal Article
Projecting the Impact of Population Aging on the Quebec Labour Market
by
Boisclair, David
,
Michaud, Pierre-Carl
,
Laliberté-Auger, François
in
Aging
,
Economic development
,
Economic growth
2016
Quebecers are living longer than ever before as a result of better health as well as improved educational attainment and economic well-being. Using a dynamic microsimulation model, we show that an aging workforce will not necessarily mean a decline in Quebec employment levels in the coming years. Because future experienced workers will be more educated and more of them will remain in employment for longer, we project that annual growth rates in employment will stay positive, averaging between 0.2 and 0.3 percent over the next two decades. Between 2035 and 2050, employment could contribute nearly 0.3 percentage points to annual economic growth in Quebec.
Journal Article
Remote Sensing Observations of Effects of Mountain Blocking on Travelling Gravity-Shear Waves and Associated Clouds
by
Reinking, Roger F.
,
Bissonnette, Luc R.
,
Frisch, A. Shelby
in
Clouds
,
Convection, turbulence, diffusion. Boundary layer structure and dynamics
,
Earth, ocean, space
2003
Trapped Kelvin-Helmholtz (K-H) waves and vortices were monitored as they were generated immediately upwind of a mountain and driven into the barrier by a low-level jet. A stratus cloud visually revealed the embedded, propagating, gravity-shear waves. Interactions of the waves with the mountain were deciphered using remote sensing measurements of the structure, motions, and microphysics within the cloud and conceptual models based on existing theories. The observations show that the mountain acted as a dam to the flow that was primed for, but did not spontaneously induce, the waves. In response to the blocking, the waves spatially developed a pattern of formation, amplification, and breakdown between the upstream flow and the barrier, and altered the associated clouds in the process. Notably, radar signatures of velocity variance depicted organized, intertwined ribbons of relatively large vorticity within the wave layer. These provided measured evidence of the vortex sheet and streamwise vortex tubes predicted by advanced K-H instability theory, the three-dimensional version of Scorer's `stripe', the layer of rotational fluid between opposed flows that led to the wave generation. A theory of resonant interaction of wave trains, but with blocking imposed, appears to explain the internal structure of the pile-up of the flow and wave amplification approaching the barrier. Evolution of the supporting atmospheric thermal structure and introduction of a boundary-layer flow reversal follow a current model of blocking, although some features may have developed more directly from wave-driven mixing. The remote sensors also measured the influence of the waves on the cloud liquid water, including a cumulative enlargement of droplets as they were carried through a series of waves.
Journal Article
Next revolution in the molecular theranostics of infectious diseases: microfabricated systems for personalized medicine
by
Bergeron, Michel G
,
Bissonnette, Luc
in
Communicable diseases
,
Communicable Diseases - diagnosis
,
Communicable Diseases - genetics
2006
The molecular diagnosis of infectious diseases is currently going through a revolution sustained by the regulatory approval of amplification tests that have been shown to be equivalent or superior to existing gold standard methods. The recent approval of a microarray system for the pharmacogenomic profiling of cytochrome P450-mediated drug metabolism is paving the way to novel, rapid, sensitive, robust and economical microfabricated systems for point-of-care diagnostics, which are utilized closer and closer to the patient s bedside. These systems will enable the multiparametric genetic evaluation of several medical conditions, including infectious diseases. This forecoming revolution will position molecular theranostics in a broader integrated view of personalized medicine, which exploits genetic information from microbes and human hosts to optimize patient management and disease treatment.
Journal Article