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"Block, Barbara A."
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The future of bluefin tunas : ecology, fisheries management, and conservation
\"This book provides the latest information on the science, fisheries policy, and management decisions surrounding each of the three species of bluefin tunas in the Thunnus genus (Atlantic, Pacific, and Southern). This edited collection includes expert discussion of these tunas, which remain, despite their dwindling numbers, at the center of a multi-billion-dollar global fisheries industry. The book covers the collaborative scientific efforts of 15 nations, featuring the work of biologists, oceanographers, fisheries scientists, policy makers, and conservationists\"-- Provided by publisher.
Tracking the global footprint of fisheries
2018
As the human population has grown in recent decades, our dependence on ocean-supplied protein has rapidly increased. Kroodsma et al. took advantage of the automatic identification system installed on all industrial fishing vessels to map and quantify fishing efforts across the world (see the Perspective by Poloczanska). More than half of the world's oceans are subject to industrial-scale harvest, spanning an area four times that covered by terrestrial agriculture. Furthermore, fishing efforts seem not to depend on economic or environmental drivers, but rather social and political schedules. Thus, more active measures will likely be needed to ensure sustainable use of ocean resources. Science , this issue p. 904 ; see also p. 864 More than half of the ocean is exposed to industrial fishing activities. Although fishing is one of the most widespread activities by which humans harvest natural resources, its global footprint is poorly understood and has never been directly quantified. We processed 22 billion automatic identification system messages and tracked >70,000 industrial fishing vessels from 2012 to 2016, creating a global dynamic footprint of fishing effort with spatial and temporal resolution two to three orders of magnitude higher than for previous data sets. Our data show that industrial fishing occurs in >55% of ocean area and has a spatial extent more than four times that of agriculture. We find that global patterns of fishing have surprisingly low sensitivity to short-term economic and environmental variation and a strong response to cultural and political events such as holidays and closures.
Journal Article
Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding
by
Starks, Hilary A.
,
Block, Barbara A.
,
Boehm, Alexandria B.
in
Analysis
,
Animals
,
Aquatic environment
2017
Molecular analysis of environmental DNA (eDNA) can be used to assess vertebrate biodiversity in aquatic systems, but limited work has applied eDNA technologies to marine waters. Further, there is limited understanding of the spatial distribution of vertebrate eDNA in marine waters. Here, we use an eDNA metabarcoding approach to target and amplify a hypervariable region of the mitochondrial 12S rRNA gene to characterize vertebrate communities at 10 oceanographic stations spanning 45 km within the Monterey Bay National Marine Sanctuary (MBNMS). In this study, we collected three biological replicates of small volume water samples (1 L) at 2 depths at each of the 10 stations. We amplified fish mitochondrial DNA using a universal primer set. We obtained 5,644,299 high quality Illumina sequence reads from the environmental samples. The sequence reads were annotated to the lowest taxonomic assignment using a bioinformatics pipeline. The eDNA survey identified, to the lowest taxonomic rank, 7 families, 3 subfamilies, 10 genera, and 72 species of vertebrates at the study sites. These 92 distinct taxa come from 33 unique marine vertebrate families. We observed significantly different vertebrate community composition between sampling depths (0 m and 20/40 m deep) across all stations and significantly different communities at stations located on the continental shelf (<200 m bottom depth) versus in the deeper waters of the canyons of Monterey Bay (>200 m bottom depth). All but 1 family identified using eDNA metabarcoding is known to occur in MBNMS. The study informs the implementation of eDNA metabarcoding for vertebrate biomonitoring.
Journal Article
Ontogenetic shifts in morphology and ecology of eastern Pacific white sharks revealed by computer vision
by
DiGiacomo, Alexandra E.
,
Andrzejaczek, Samantha
,
Block, Barbara A.
in
Adults
,
Altitude
,
Animal physiology
2026
Body size is a fundamental property of animal physiology, growth, and maturation, yet field measurements remain difficult to acquire for large-bodied, highly mobile marine species such as white sharks ( Carcharodon carcharias) . In this study, we integrate aerial and underwater imagery to obtain high-resolution morphometrics of eastern Pacific white sharks remotely in the Monterey Bay National Marine Sanctuary. We develop and validate a computational pipeline leveraging deep learning analysis of Unoccupied Aircraft System (UAS) imagery to extract shark total length and body condition, given by a span-length ratio. UAS-based morphometric data reveal that white sharks form size-structured aggregations aligned with oceanographic gradients, indicating that coastal areas within Monterey Bay function as key transitional zones along a continuum of ontogenetic habitat use on the central coast of California. Across individuals, extended girth-length scaling relationships indicate proportionally greater girth amongst eastern Pacific white sharks relative to other populations. This pattern is particularly pronounced in females, which exhibit progressively higher body condition with life stage, likely reflecting the energetic demands of reproduction or sex-specific foraging strategies. By linking UAS-derived morphometrics to ecological context, this approach enables a novel population-level investigation of ecological structure, body size, and morphological variation in a marine predator population.
Journal Article
Crude Oil Impairs Cardiac Excitation-Contraction Coupling in Fish
by
Cros, Caroline
,
Incardona, John P.
,
Block, Barbara A.
in
Action potentials
,
Animals
,
arrhythmia
2014
Crude oil is known to disrupt cardiac function in fish embryos. Large oil spills, such as the Deepwater Horizon (DWH) disaster that occurred in 2010 in the Gulf of Mexico, could severely affect fish at impacted spawning sites. The physiological mechanisms underlying such potential cardiotoxic effects remain unclear. Here, we show that crude oil samples collected from the DWH spill prolonged the action potential of isolated cardiomyocytes from juvenile bluefin and yellowfin tunas, through the blocking of the delayed rectifier potassium current (IKr). Crude oil exposure also decreased calcium current (ICa) and calcium cycling, which disrupted excitation-contraction coupling in cardiomyocytes. Our findings demonstrate a cardiotoxic mechanism by which crude oil affects the regulation of cellular excitability, with implications for life-threatening arrhythmias in vertebrates.
Journal Article
Impacts of marine heatwaves on top predator distributions are variable but predictable
by
Costa, Daniel P.
,
Benson, Scott R.
,
Dewitt, Lynn
in
704/106/694/2739/2819
,
704/158/2039
,
704/829/2737
2023
Marine heatwaves cause widespread environmental, biological, and socio-economic impacts, placing them at the forefront of 21st-century management challenges. However, heatwaves vary in intensity and evolution, and a paucity of information on how this variability impacts marine species limits our ability to proactively manage for these extreme events. Here, we model the effects of four recent heatwaves (2014, 2015, 2019, 2020) in the Northeastern Pacific on the distributions of 14 top predator species of ecological, cultural, and commercial importance. Predicted responses were highly variable across species and heatwaves, ranging from near total loss of habitat to a two-fold increase. Heatwaves rapidly altered political bio-geographies, with up to 10% of predicted habitat across all species shifting jurisdictions during individual heatwaves. The variability in predicted responses across species and heatwaves portends the need for novel management solutions that can rapidly respond to extreme climate events. As proof-of-concept, we developed an operational dynamic ocean management tool that predicts predator distributions and responses to extreme conditions in near real-time.
This study examines the effect of four marine heatwaves in the Northeast Pacific on the distributions of 14 top predators, revealing a wide-array of predator responses both among and within heatwaves. Predator responses were highly predictable, demonstrating capacity for early warning systems of heatwave impacts, similar to weather forecasts.
Journal Article
Tissue Turnover Rates and Isotopic Trophic Discrimination Factors in the Endothermic Teleost, Pacific Bluefin Tuna (Thunnus orientalis)
by
Litvin, Steven Y.
,
Popp, Brian N.
,
Madigan, Daniel J.
in
Analysis
,
Animal behavior
,
Animal Migration
2012
Stable isotope analysis (SIA) of highly migratory marine pelagic animals can improve understanding of their migratory patterns and trophic ecology. However, accurate interpretation of isotopic analyses relies on knowledge of isotope turnover rates and tissue-diet isotope discrimination factors. Laboratory-derived turnover rates and discrimination factors have been difficult to obtain due to the challenges of maintaining these species in captivity. We conducted a study to determine tissue- (white muscle and liver) and isotope- (nitrogen and carbon) specific turnover rates and trophic discrimination factors (TDFs) using archived tissues from captive Pacific bluefin tuna (PBFT), Thunnus orientalis, 1-2914 days after a diet shift in captivity. Half-life values for (15)N turnover in white muscle and liver were 167 and 86 days, and for (13)C were 255 and 162 days, respectively. TDFs for white muscle and liver were 1.9 and 1.1‰ for δ(15)N and 1.8 and 1.2‰ for δ(13)C, respectively. Our results demonstrate that turnover of (15)N and (13)C in bluefin tuna tissues is well described by a single compartment first-order kinetics model. We report variability in turnover rates between tissue types and their isotope dynamics, and hypothesize that metabolic processes play a large role in turnover of nitrogen and carbon in PBFT white muscle and liver tissues. (15)N in white muscle tissue showed the most predictable change with diet over time, suggesting that white muscle δ(15)N data may provide the most reliable inferences for diet and migration studies using stable isotopes in wild fish. These results allow more accurate interpretation of field data and dramatically improve our ability to use stable isotope data from wild tunas to better understand their migration patterns and trophic ecology.
Journal Article
Predicted habitat shifts of Pacific top predators in a changing climate
by
Costa, Daniel P.
,
Dunne, John P.
,
Bograd, Steven J.
in
704/106/694
,
704/158/2446
,
704/158/672
2013
Climate change scenarios predict an average sea surface temperature rise of 1–6 °C by 2100. Now, a study investigating the potential effect of these changes on the distribution and diversity of marine top predators finds that, based on data from electronic tags on 23 marine species, a change in core habitat range of up to 35% is possible for some species by 2100.
To manage marine ecosystems proactively, it is important to identify species at risk and habitats critical for conservation. Climate change scenarios have predicted an average sea surface temperature (SST) rise of 1–6 °C by 2100 (refs
1
,
2
), which could affect the distribution and habitat of many marine species. Here we examine top predator distribution and diversity in the light of climate change using a database of 4,300 electronic tags deployed on 23 marine species from the Tagging of Pacific Predators project, and output from a global climate model to 2100. On the basis of models of observed species distribution as a function of SST, chlorophyll
a
and bathymetry, we project changes in species-specific core habitat and basin-scale patterns of biodiversity. We predict up to a 35% change in core habitat for some species, significant differences in rates and patterns of habitat change across guilds, and a substantial northward displacement of biodiversity across the North Pacific. For already stressed species, increased migration times and loss of pelagic habitat could exacerbate population declines or inhibit recovery. The impending effects of climate change stress the urgency of adaptively managing ecosystems facing multiple threats.
Journal Article
Atlantic Bluefin Tuna: A Novel Multistock Spatial Model for Assessing Population Biomass
by
Carruthers, Tom
,
McAllister, Murdoch K.
,
Block, Barbara A.
in
Analysis
,
Animals
,
Atlantic bluefin tuna
2011
Atlantic bluefin tuna (Thunnus thynnus) is considered to be overfished, but the status of its populations has been debated, partly because of uncertainties regarding the effects of mixing on fishing grounds. A better understanding of spatial structure and mixing may help fisheries managers to successfully rebuild populations to sustainable levels while maximizing catches. We formulate a new seasonally and spatially explicit fisheries model that is fitted to conventional and electronic tag data, historic catch-at-age reconstructions, and otolith microchemistry stock-composition data to improve the capacity to assess past, current, and future population sizes of Atlantic bluefin tuna. We apply the model to estimate spatial and temporal mixing of the eastern (Mediterranean) and western (Gulf of Mexico) populations, and to reconstruct abundances from 1950 to 2008. We show that western and eastern populations have been reduced to 17% and 33%, respectively, of 1950 spawning stock biomass levels. Overfishing to below the biomass that produces maximum sustainable yield occurred in the 1960s and the late 1990s for western and eastern populations, respectively. The model predicts that mixing depends on season, ontogeny, and location, and is highest in the western Atlantic. Assuming that future catches are zero, western and eastern populations are predicted to recover to levels at maximum sustainable yield by 2025 and 2015, respectively. However, the western population will not recover with catches of 1750 and 12,900 tonnes (the \"rebuilding quotas\") in the western and eastern Atlantic, respectively, with or without closures in the Gulf of Mexico. If future catches are double the rebuilding quotas, then rebuilding of both populations will be compromised. If fishing were to continue in the eastern Atlantic at the unregulated levels of 2007, both stocks would continue to decline. Since populations mix on North Atlantic foraging grounds, successful rebuilding policies will benefit from trans-Atlantic cooperation.
Journal Article
Amino Acid Isotope Incorporation and Enrichment Factors in Pacific Bluefin Tuna, Thunnus orientalis
by
Popp, Brian N.
,
Bradley, Christina J.
,
Madigan, Daniel J.
in
Algorithms
,
Amino acids
,
Amino Acids - metabolism
2014
Compound specific isotopic analysis (CSIA) of amino acids has received increasing attention in ecological studies in recent years due to its ability to evaluate trophic positions and elucidate baseline nutrient sources. However, the incorporation rates of individual amino acids into protein and specific trophic discrimination factors (TDFs) are largely unknown, limiting the application of CSIA to trophic studies. We determined nitrogen turnover rates of individual amino acids from a long-term (up to 1054 days) laboratory experiment using captive Pacific bluefin tuna, Thunnus orientalis (PBFT), a large endothermic pelagic fish fed a controlled diet. Small PBFT (white muscle δ(15)N∼11.5‰) were collected in San Diego, CA and transported to the Tuna Research and Conservation Center (TRCC) where they were fed a controlled diet with high δ(15)N values relative to PBFT white muscle (diet δ(15)N∼13.9‰). Half-lives of trophic and source amino acids ranged from 28.6 to 305.4 days and 67.5 to 136.2 days, respectively. The TDF for the weighted mean values of amino acids was 3.0 ‰, ranging from 2.2 to 15.8 ‰ for individual combinations of 6 trophic and 5 source amino acids. Changes in the δ(15)N values of amino acids across trophic levels are the underlying drivers of the trophic (15)N enrichment. Nearly all amino acid δ(15)N values in this experiment changed exponentially and could be described by a single compartment model. Significant differences in the rate of (15)N incorporation were found for source and trophic amino acids both within and between these groups. Varying half-lives of individual amino acids can be applied to migratory organisms as isotopic clocks, determining the length of time an individual has spent in a new environment. These results greatly enhance the ability to interpret compound specific isotope analyses in trophic studies.
Journal Article