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18 result(s) for "Blow, Matthew L"
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Anchoring-driven spontaneous rotations in active gel droplets
We study the dynamics of an active gel droplet with imposed orientational anchoring (normal or planar) at its surface. We find that if the activity is large enough droplets subject to strong anchoring spontaneously start to rotate, with the sense of rotation randomly selected by fluctuations. Contractile droplets rotate only for planar anchoring and extensile ones only for normal anchoring. This is because such a combination leads to a pair of stable elastic deformations which creates an active torque to power the rotation. Interestingly, under these conditions there is a conflict between the anchoring promoted thermodynamically and that favoured by activity. By tuning activity and anchoring strength, we find a wealth of qualitatively different droplet morphologies and spatiotemporal patterns, encompassing steady rotations, oscillations, and more irregular trajectories. The spontaneous rotations we observe are fundamentally different from previously reported instances of rotating defects in active fluids as they require the presence of strong enough anchoring and entail significant droplet shape deformations.
Biphasic, Lyotropic, Active Nematics
We perform dynamical simulations of a two-dimensional active nematic fluid in coexistence with an isotropic fluid. Drops of active nematic become elongated, and an effective anchoring develops at the nematic-isotropic interface. The activity also causes an undulatory instability of the interface. This results in defects of positive topological charge being ejected into the nematic, leaving the interface with a diffuse negative charge. Quenching the active lyotropic fluid results in a steady state in which phase-separating domains are elongated and then torn apart by active stirring.
Surface evolver simulations of drops on microposts
An important feature in the design of superhydrophobic surfaces is their robustness against collapse from the Cassie-Baxter configuration to the Wenzel state. Upon such a transition a surface loses its properties of low adhesion and friction. We describe how to adapt the Surface Evolver algorithm to predict the parameters and mechanism of the collapse transition on posts of arbitrary shape. In particular, contributions to the free energy evaluated over the solid-liquid surface are reduced to line integrals to give good convergence. The algorithm is validated for straight, vertical and inclined, posts. Numerical results for curved posts with a horizontal section at their ends show that these are more efficient in stabilising the Cassie state than straight posts, and identify whether the interface first depins from the post sides or the post tips.
Anisotropic imbibition on surfaces patterned with polygonal posts
We present and interpret lattice Boltzmann simulations of thick films spreading on surfaces patterned with polygonal posts. We show that the mechanism of pinning and depinning differs with the direction of advance, and demonstrate that this leads to anisotropic spreading within a certain range of material contact angles.
Motility of active nematic films driven by \active anchoring\
We provide a minimal model for an active nematic film in contact with both a solid substrate and a passive isotropic fluid, and explore its dynamics in one and two dimensions using a combination of hybrid Lattice Boltzmann simulations and analytical calculations. By imposing nematic anchoring at the substrate while active flows induce a preferred alignment at the interface (\"active anchoring\"), we demonstrate that directed fluid flow spontaneously emerges in cases where the two anchoring types are opposing. In one dimension, our model reduces to an analogue of a loaded elastic column. Here, the transition from a stationary to a motile state is akin to the buckling bifurcation, but offers the possilibity to reverse the flow direction for a given set of parameters and boundary conditions solely by changing initial conditions. The two-dimensional variant of our model allows for additional tangential instabilities, leading to self-assembled propagating surface waves for intermediate activity and for a continously deforming irregular surface at high activity. Our results might be relevant for designing active microfluidic geometries, but also for curvature-guided self-assembly or switchable diffraction gratings.
Interfacial motion in flexo- and order-electric switching between nematic filled states
We consider a nematic liquid crystal, in coexistence with its isotropic phase, in contact with a substrate patterned with rectangular grooves. In such a system, the nematic phase may fill the grooves without the occurrence of complete wetting. There may exist multiple (meta)stable filled states, each characterised by the type of distortion (bend or splay) in each corner of the groove and by the shape of the nematic-isotropic interface, and additionally the plateaux that separate the grooves may be either dry or wet with a thin layer of nematic. Using numerical simulations, we analyse the dynamical response of the system to an externally- applied electric field, with the aim of identifying switching transitions between these filled states. We find that order-electric coupling between the fluid and the field provides a means of switching between states where the plateaux between grooves are dry and states where they are wet by a nematic layer, without affecting the configuration of the nematic within the groove. We find that flexoelectric coupling may change the nematic texture in the groove, provided that the flexoelectric coupling differentiates between the types of distortion at the corners of the substrate. We identify intermediate stages of the transitions, and the role played by the motion of the nematic-isotropic interface. We determine quantitatively the field magnitudes and orientations required to effect each type of transition.
Modelling unidirectional liquid spreading on slanted microposts
A lattice Boltzmann algorithm is used to simulate the slow spreading of drops on a surface patterned with slanted micro-posts. Gibb's pinning of the interface on the sides or top of the posts leads to unidirectional spreading over a wide range of contact angles and inclination angles of the posts. Regimes for spreading in no, one or two directions are identified, and shown to agree well with a two-dimensional theory proposed in Chu, Xiao and Wang (Nature Materials, 9, 413). A more detailed numerical analysis of the contact line shapes allows us to understand deviations from the two dimensional model, and to identify the shapes of the pinned interfaces.
Anisotropic wetting and de-wetting of drops on substrates patterned with polygonal posts
We present results showing how water drops, produced by ink-jet printing, spread on surfaces patterned with lattices of diamond or triangular posts. Considering post widths typically ~7 m and lattice spacings between 15-40 m, we observe drop shapes with 3,4 and 6-fold symmetry, depending on both the symmetry of the lattice and the shape of the posts. This is a result of the different mechanisms of interface pinning and depinning which depend on the direction of the contact line motion with respect to the post shape. Lattice Boltzmann simulations are used to describe these mechanisms in detail for triangular posts. We also follow the motion of the contact line as the drops evaporate showing that they tend to return to their original shape. To explain this we show that the easy direction for movement is the same for spreading and drying drops. We compare the behaviour of small drops with that of larger drops created by jetting several drops at the same position. We find that the contact line motion is unexpectedly insensitive to drop volume, even when a spherical cap of fluid forms above the posts. The findings are relevant to microfluidic applications and to the control of drop shapes in ink-jet printing.
ChIP-Seq identification of weakly conserved heart enhancers
Len Pennacchio and colleagues used ChIP-Seq with the enhancer-associated protein p300 to identify 3,000 candidate cardiac transcriptional enhancers in embryonic mice at E11.5. Notably, most candidate heart enhancers at this time point are not deeply evolutionarily conserved. Accurate control of tissue-specific gene expression plays a pivotal role in heart development, but few cardiac transcriptional enhancers have thus far been identified. Extreme noncoding-sequence conservation has successfully predicted enhancers that are active in many tissues but has failed to identify substantial numbers of heart-specific enhancers. Here, we used ChIP-Seq with the enhancer-associated protein p300 from mouse embryonic day 11.5 heart tissue to identify over 3,000 candidate heart enhancers genome wide. Compared to enhancers active in othertissues we studied at this time point, most candidate heart enhancers were less deeply conserved in vertebrate evolution. Nevertheless, transgenic mouse assays of 130 candidate regions revealed that most function reproducibly as enhancers active in the heart, irrespective of their degree of evolutionary constraint. These results provide evidence for a large population of poorly conserved heart enhancers and suggest that the evolutionary conservation of embryonic enhancers can vary depending on tissue type.
Large-scale discovery of enhancers from human heart tissue
Len Pennacchio, Axel Visel and colleagues use an epigenomic approach to identify a large number of candidate enhancers from human heart tissue. This work will facilitate further studies into the role of enhancers in human cardiac development and disease. Development and function of the human heart depend on the dynamic control of tissue-specific gene expression by distant-acting transcriptional enhancers. To generate an accurate genome-wide map of human heart enhancers, we used an epigenomic enhancer discovery approach and identified ∼6,200 candidate enhancer sequences directly from fetal and adult human heart tissue. Consistent with their predicted function, these elements were markedly enriched near genes implicated in heart development, function and disease. To further validate their in vivo enhancer activity, we tested 65 of these human sequences in a transgenic mouse enhancer assay and observed that 43 (66%) drove reproducible reporter gene expression in the heart. These results support the discovery of a genome-wide set of noncoding sequences highly enriched in human heart enhancers that is likely to facilitate downstream studies of the role of enhancers in development and pathological conditions of the heart.