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result(s) for
"Brett, Maria"
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Electrochemical and AFM Characterization of G-Quadruplex Electrochemical Biosensors and Applications
by
Eritja, Ramon
,
Oliveira-Brett, Ana Maria
,
Chiorcea-Paquim, Ana-Maria
in
Analytical chemistry
,
Aptamers
,
Atomic force microscopy
2018
Guanine-rich DNA sequences are able to form G-quadruplexes, being involved in important biological processes and representing smart self-assembling nanomaterials that are increasingly used in DNA nanotechnology and biosensor technology. G-quadruplex electrochemical biosensors have received particular attention, since the electrochemical response is particularly sensitive to the DNA structural changes from single-stranded, double-stranded, or hairpin into a G-quadruplex configuration. Furthermore, the development of an increased number of G-quadruplex aptamers that combine the G-quadruplex stiffness and self-assembling versatility with the aptamer high specificity of binding to a variety of molecular targets allowed the construction of biosensors with increased selectivity and sensitivity. This review discusses the recent advances on the electrochemical characterization, design, and applications of G-quadruplex electrochemical biosensors in the evaluation of metal ions, G-quadruplex ligands, and other small organic molecules, proteins, and cells. The electrochemical and atomic force microscopy characterization of G-quadruplexes is presented. The incubation time and cations concentration dependence in controlling the G-quadruplex folding, stability, and nanostructures formation at carbon electrodes are discussed. Different G-quadruplex electrochemical biosensors design strategies, based on the DNA folding into a G-quadruplex, the use of G-quadruplex aptamers, or the use of hemin/G-quadruplex DNAzymes, are revisited.
Journal Article
DNA Electrochemical Biosensors for In Situ Probing of Pharmaceutical Drug Oxidative DNA Damage
by
Oliveira-Brett, Ana Maria
,
Chiorcea-Paquim, Ana-Maria
in
biomarker of DNA damage
,
Biosensing Techniques
,
damage to DNA bases
2021
Deoxyribonucleic acid (DNA) electrochemical biosensors are devices that incorporate immobilized DNA as a molecular recognition element on the electrode surface, and enable probing in situ the oxidative DNA damage. A wide range of DNA electrochemical biosensor analytical and biotechnological applications in pharmacology are foreseen, due to their ability to determine in situ and in real-time the DNA interaction mechanisms with pharmaceutical drugs, as well as with their degradation products, redox reaction products, and metabolites, and due to their capacity to achieve quantitative electroanalytical evaluation of the drugs, with high sensitivity, short time of analysis, and low cost. This review presents the design and applications of label-free DNA electrochemical biosensors that use DNA direct electrochemical oxidation to detect oxidative DNA damage. The DNA electrochemical biosensor development, from the viewpoint of electrochemical and atomic force microscopy (AFM) characterization, and the bottom-up immobilization of DNA nanostructures at the electrode surface, are described. Applications of DNA electrochemical biosensors that enable the label-free detection of DNA interactions with pharmaceutical compounds, such as acridine derivatives, alkaloids, alkylating agents, alkylphosphocholines, antibiotics, antimetabolites, kinase inhibitors, immunomodulatory agents, metal complexes, nucleoside analogs, and phenolic compounds, which can be used in drug analysis and drug discovery, and may lead to future screening systems, are reviewed.
Journal Article
What spatially explicit quantitative evidence exists that shows the effect of land tenure on illegal hunting of endangered terrestrial mammals in sub-Saharan Africa? A systematic map protocol
by
Duporge, Isla
,
Hodgetts, Timothy
,
Brett, Maria
in
Agribusiness
,
Animal products
,
Anthropogenic factors
2018
Background
Over the last two decades there has been an increase in the demand for land in Sub Saharan Africa, particularly from foreign agribusiness investment to provide food for an increasing human population. The majority of land outside of protected areas in sub-Saharan Africa is under customary tenure. Due to poor land administration in the region, communities living in undocumented land areas tend to be at greater risk of eviction from increasing liberalisation of land markets. To prevent local displacement and disturbance to investment caused by land disputes tenure clarification is growing in importance on national and international agendas. Land conversion can fragment wildlife habitat while reducing the suitable range areas of terrestrial mammal populations on the continent. Simultaneously illegal hunting is on the rise for a wide variety of taxa driven by a demand for food and income from the sale of animal products. To enable a better understanding of how land tenure arrangements impact upon spatial variations in illegal hunting, this protocol sets out the parameters for an evidence map which will collate and analyse the spatially explicit quantitative evidence that exists showing the effect of land tenure on illegal hunting of endangered terrestrial mammals in sub-Saharan Africa. Sub-Saharan Africa is the region of focus as it contains the highest number of terrestrial mammals listed as vulnerable, endangered or critically endangered by the International Union for Conservation of Nature. Taking stock of what methods have been used to gather data and where evidence exists can guide future research in this area while informing conservation interventions.
Methods
This evidence map will compare: (1) data availability on the spatial distribution of illicit hunting of endangered terrestrial mammals across different land tenure regimes in sub-Saharan Africa; (2) research methodologies that have primarily been used to collect quantitative data on illegal hunting and comparability of existing data; (3) preferences in the research body toward particular taxa and geographical areas, (4) the evidence map will provide an analysis on the influence other environmental and anthropogenic determinants that influence the spatial distribution of illicit hunting incidences, e.g., proximity to roads, water bodies, range patrol bases etc. Eight academic databases and numerous organisation repositories will be searched for relevant studies by three authors. Double screening will be carried out on all articles to locate studies that meet the specified inclusion criteria, for inclusion studies must contain spatially explicit quantitative data on illegal hunting of endangered terrestrial mammals as defined by the International Union for the Conservation of Nature. Relevant information from studies will be extracted to a custom-made extraction form. The resulting map will consist of a narrative synthesis, descriptive statistics and a heat map in the form of a matrix. By providing an overview of the evidence base the resulting map can inform future meta-analyses by showing where there is sufficient comparable data while guiding conservation interventions by indicating geographical areas where species are most at risk.
Journal Article
An integrated perspective of electrochemistry teaching in science and technology
by
Brett, Christopher M. A.
,
Oliveira-Brett, Ana Maria
in
19th century
,
Analytical Chemistry
,
Characterization and Evaluation of Materials
2024
A perspective on the teaching of electrochemistry for science and engineering students is discussed followed by the elements and components of a wide-ranging course that can be adapted to the needs of each science and/or engineering students and, indeed, the scientific community and society at large. For all, there is a pressing need to be able to reflect critically on the knowledge gained, so that in their future careers they are able to take scientific, political and economic decisions involving different aspects of electrochemistry in the best way, particularly regarding energy, materials, health, foods and environment.
Journal Article
Nanostructured material–based electrochemical sensing of oxidative DNA damage biomarkers 8-oxoguanine and 8-oxodeoxyguanosine: a comprehensive review
by
Oliveira-Brett, Ana Maria
,
Chiorcea-Paquim, Ana-Maria
in
8-Hydroxy-2'-Deoxyguanosine - analysis
,
8-Hydroxyguanine
,
Age related diseases
2021
Oxidative DNA damage plays an important role in the pathogenesis of various diseases. Among oxidative DNA lesions, 8-oxoguanine (8-oxoG) and its corresponding nucleotide 8-oxo-2′-deoxyguanosine (8-oxodG), the guanine and deoxyguanosine oxidation products, have gained much attention, being considered biomarkers for oxidative DNA damage. Both 8-oxoG and 8-oxodG are used to predict overall body oxidative stress levels, to estimate the risk, to detect, and to make prognosis related to treatment of cancer, degenerative, and other age-related diseases. The need for rapid, easy, and low-cost detection and quantification of 8-oxoG and 8-oxodG biomarkers of oxidative DNA damage in complex samples, urine, blood, and tissue, caused an increasing interest on electrochemical sensors based on modified electrodes, due to their high sensitivity and selectivity, low-cost, and easy miniaturization and automation. This review aims to provide a comprehensive and exhaustive overview of the fundamental principles concerning the electrochemical determination of the biomarkers 8-oxoG and 8-oxodG using nanostructured materials (NsM), such as carbon nanotubes, carbon nanofibers, graphene-related materials, gold nanomaterials, metal nanoparticles, polymers, nanocomposites, dendrimers, antibodies and aptamers, and modified electrochemical sensors.
Graphical abstract
Journal Article
Calcium channel blocker lercanidipine electrochemistry using a carbon black–modified glassy carbon electrode
by
Oliveira-Brett, Ana Maria
,
Ana-Maria, Chiorcea-Paquim
,
Fernandes, Isabel Garrido
in
Black carbon
,
Boron
,
Calcium
2020
Lercanidipine, a third-generation dihydropyridine calcium L-type channel blocker, redox behavior at different carbon electrode materials, in a wide pH range, using cyclic, square-wave, and differential pulse voltammetry, was studied. A comparison was made between unmodified glassy carbon electrode (GCE) and boron-doped diamond electrode (BDDE), and GCE and BDDE modified with a carbon black (CB) nanoparticle embedded within a dihexadecylphosphate (DHP) nanostructured film (CB–DHP/GCE and CB–DHP/BDDE). Lercanidipine oxidation, for 3.4 < pH < 9.5, is an irreversible, diffusion-controlled, pH-dependent process that occurs in two consecutive steps, with the transfer of one electron and one proton, at the N1 and C4 positions in the 1,4-dihydropyridine ring. For pH > 9.5, both oxidation processes are pH-independent and a pKa = 9.40 was determined. Lercanidipine reduction at pH = 7.0 is an irreversible process, and the lercanidipine reduction products are electroactive and follow a reversible electron transfer reaction. Lercanidipine electroanalytical determination, at a nanostructured GCE modified with a CB–DHP film (CB–DHP/GCE), with no need for N2 purging, with a detection limit of 0.058 μM (3.58 × 10−5 g L−1) and a quantification limit of 0.176 μM (1.08 × 10−4 g L−1), was achieved.
Journal Article
Pharmaceuticals released from senior residences: occurrence and risk evaluation
by
Barata, Carlos
,
Lima, Luisa
,
Oliveira-Brett, Ana Maria
in
acetaminophen
,
Acetylcysteine
,
Aged
2018
One of the main pursuits, yet most difficult, in monitoring studies is to identify the sources of environmental pollution. In this study, we have identified health-care facilities from south European countries as an important source of pharmaceuticals in the environment. We have estimated that compounds consumed in by the elderly and released from effluents of senior residences can reach river waters at a concentration higher than 0.01 μg/L, which is the European Medicines Agency (EMA) threshold for risk evaluation of pharmaceuticals in surface waters. This study has been based on five health institutions in Portugal, Spain, and France, with 52 to 130 beds. We have compiled the pharmaceuticals dispensed on a daily base and calculated the consumption rates. From 54.9 to 1801 g of pharmaceuticals are consumed daily, with laxatives, analgesics, antiepileptics, antibiotics, and antidiabetic agents being the main drug families administered. According to excretion rates, dilution in the sewerage system, and elimination in wastewater treatment plants, macrogol, metformin, paracetamol, acetylcysteine, amoxicillin, and gabapentin, among others, are expected to reach river waters. Finally, we discuss the risk management actions related to the discharge of pharmaceuticals from senior residences to surface waters.
Journal Article
Guanine Quadruplex Electrochemical Aptasensors
Guanine-rich nucleic acids are able to self-assemble into G-quadruplex four-stranded secondary structures, which are found at the level of telomeric regions of chromosomes, oncogene promoter sequences and other biologically-relevant regions of the genome. Due to their extraordinary stiffness and biological role, G-quadruples become relevant in areas ranging from structural biology to medicinal chemistry, supra-molecular chemistry, nanotechnology and biosensor technology. In addition to classical methodologies, such as circular dichroism, nuclear magnetic resonance or crystallography, electrochemical methods have been successfully used for the rapid detection of the conformational changes from single-strand to G-quadruplex. This review presents recent advances on the G-quadruplex electrochemical characterization and on the design and applications of G-quadruplex electrochemical biosensors, with special emphasis on the G-quadruplex aptasensors and hemin/G-quadruplex peroxidase-mimicking DNAzyme biosensors.
Journal Article
In situ electrochemical evaluation of anticancer drug temozolomide and its metabolites–DNA interaction
by
Oliveira, S. Carlos B.
,
Oliveira-Brett, Ana Maria
,
C. Lopes, Ilanna
in
Aminoimidazole Carboxamide - metabolism
,
Aminoimidazole Carboxamide - pharmacology
,
Analytical Chemistry
2013
Temozolomide (TMZ) is an antineoplastic alkylating agent with activity against serious and aggressive types of brain tumours. It has been postulated that TMZ exerts its antitumor activity via its spontaneous degradation at physiological pH. The in vitro evaluation of the interaction of TMZ and its final metabolites, 5-aminoimidazole-4-carboxamide (AIC) and methyldiazonium ion, with double-stranded DNA (dsDNA) was studied using differential pulse voltammetry at a glassy carbon electrode. The DNA damage was electrochemically detected following the changes in the oxidation peaks of guanosine and adenosine residues. The results obtained revealed the decrease of the dsDNA oxidation peaks with incubation time, showing that TMZ and AIC/methyldiazonium ion interact with dsDNA causing its condensation. Furthermore, the experiments of the in situ TMZ and AIC/methyldiazonium ion–dsDNA interaction using the multilayer dsDNA-electrochemical biosensor confirmed the condensation of dsDNA caused by these species and showed evidence for a specific interaction between the guanosine residues and TMZ metabolites, since free guanine oxidation peak was detected. The oxidative damage caused to DNA bases by TMZ metabolites was also detected electrochemically by monitoring the appearance of the 8-oxoguanine/2,8-dyhydroxyadenine oxidation peaks. Nondenaturing agarose gel electrophoresis of AIC/methyldiazonium ion–dsDNA samples confirmed the occurrence of dsDNA condensation and oxidative damage observed in the electrochemical results. The importance of the dsDNA-electrochemical biosensor in the in situ evaluation of TMZ–dsDNA interactions is clearly demonstrated.
Journal Article
Socioeconomic and nutritional determinants outweigh gut microbiota influence on neurodevelopment in young children from Antananarivo, Madagascar
by
Rambolamanana, Valérie
,
Doria, Maria V.
,
Rajaonarivo, Tatamo
in
631/326/107
,
631/326/2565/2134
,
692/499
2026
In 2024, stunted child growth affected 150 million children under the age of five years, underscoring its critical impact on global health. Stunting has also been associated with neurodevelopmental delays. This study explores the relationship between stunting, the fecal microbiota, and neurodevelopment in 2–5-year-old children from the Afribiota cross-sectional study in Madagascar. Children were assessed using the Ages and Stages Questionnaire (ASQ-3), covering five developmental domains (communication, personal-social, problem-solving, fine and gross motor). Fecal samples were analyzed via 16S rRNA gene amplicon sequencing. Classical bi- and multivariate analysis was combined with Structural Equation Modelling to evaluate direct and indirect associations between different clinical factors, the microbiota and neurodevelopment. Our study shows that stunting and low socioeconomic status are consistently linked to poorer neurodevelopmental outcomes, while low branched-chain amino acids and hemoglobin levels are associated with stunting. Furthermore, a higher microbial diversity within individuals (α-diversity—specifically the Shannon index-) was directly linked to improved neurodevelopment scores in one of the tested models, while gut microbiota variation between individuals (β-diversity) was not associated with neurodevelopment. These findings support the hypothesis of neurodevelopment being primarily influenced by nutritional and social factors, with a more limited role for microbiota diversity.
Journal Article