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1,116
result(s) for
"Bruno, William"
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Silicon mitigates nutritional stress of nitrogen, phosphorus, and calcium deficiency in two forages plants
by
Araújo, William Bruno Silva
,
Rocha, Antonio Márcio Souza
,
Teixeira, Gelza Carliane Marques
in
631/449/1736
,
631/449/2653
,
631/449/2661
2022
Forages are one of the most cultivated crops in the world. However, nutritional deficiency is common, specifically in N, P, and Ca in many forage-growing regions. Silicon (Si) can attenuate the stress caused by nutritional deficiency, but studies on Si supply’s effects on forage plants are still scarce. This research was carried out to evaluate whether the Si supply can mitigate the effects of N, P, and Ca deficiencies of two forages and the physiological and nutritional mechanisms involved. Two experiments were carried out with two forage species (
Urochloa brizantha
cv. Marandu and
Megathyrsus maximum
cv. Massai). We used nutrient solution under balanced nutrition conditions and nutritional stress due to the lack of N, P, and Ca combined with the −Si and +Si. The deficiencies of N, P, and Ca in both forages’ cultivation caused damage to physiological and nutritional variables, decreasing the plant dry matter. However, in both forage species, the Si addition to the nutrient solution decreased the extravasation of cellular electrolytes and increased the content of phenolic compounds, the green colour index, the quantum efficiency of photosystem II, the efficiencies of use of N, P and Ca and the production of shoot dry matter. The beneficial effects of Si were evidenced in stressed and non-stressed plants. The research emphasised the advantage of using Si to grow
U. brizantha
and
M. maximum
under N, P, and Ca deficiency, contributing to their sustainable cultivation.
Journal Article
A cell-based Papain-like Protease (PLpro) activity assay for rapid detection of active SARS-CoV-2 infections and antivirals
by
Maestas, Lucas I.
,
Bruno, William J.
,
Baca, Justin T.
in
60 APPLIED LIFE SCIENCES
,
Amino acids
,
Analysis
2024
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its variants are a continuous threat to human life. An urgent need remains for simple and fast tests that reliably detect active infections with SARS-CoV-2 and its variants in the early stage of infection. Here we introduce a simple and rapid activity-based diagnostic (ABDx) test that identifies SARS-CoV-2 infections by measuring the activity of a viral enzyme, Papain-Like protease (PLpro). The test system consists of a peptide that fluoresces when cleaved by SARS PLpro that is active in crude, unprocessed lysates from human tongue scrapes and saliva. Test results are obtained in 30 minutes or less using widely available fluorescence plate readers, or a battery-operated portable instrument for on-site testing. Proof-of-concept was obtained in a study on clinical specimens collected from patients with COVID-19 like symptoms who tested positive (n = 10) or negative (n = 10) with LIAT RT-PCR using nasal mid turbinate swabs. When saliva from these patients was tested with in-house endpoint RT-PCR, 17 were positive and only 5 specimens were negative, of which 2 became positive when tested 5 days later. PLpro activity correlated in 17 of these cases (3 out of 3 negatives and 14 out of 16 positives, with one invalid specimen). Despite the small number of samples, the agreement was significant (p value = 0.01). Two false negatives were detected, one from a sample with a late Ct value of 35 in diagnostic RT-PCR, indicating that an active infection was no longer present. The PLpro assay is easily scalable and expected to detect all viable SARS-CoV-2 variants, making it attractive as a screening and surveillance tool. Additionally, we show feasibility of the platform as a new homogeneous phenotypic assay for rapid screening of SARS-CoV-2 antiviral drugs and neutralizing antibodies.
Journal Article
A systematic literature review of the ethics of conducting research in the humanitarian setting
2020
Background
Research around humanitarian crises, aid delivery, and the impact of these crises on health and well-being has expanded dramatically. Ethical issues around these topics have recently received more attention. We conducted a systematic literature review to synthesize the lessons learned regarding the ethics of research in humanitarian crises.
Methods
We conducted a systematic review using the Preferred Reporting Items for Systematic Reviews and Meta-analysis (PRISMA) guidelines to identify articles regarding the ethics of research in humanitarian contexts between January 1, 1997 and September 1, 2019. We analyzed the articles to extract key themes and develop an agenda for future research.
Results
We identified 52 articles that matched our inclusion criteria. We categorized the article data into five categories of analysis: 32 were expert statements, 18 were case studies, 11 contained original research, eight were literature reviews and three were book chapters. All included articles were published in English. Using a step-wise qualitative analysis, we identified 10 major themes that encompassed these concepts and points. These major themes were:
ethics review process
(21 articles, [40.38%]);
community engagement
(15 articles [28.85%]);
the dual imperative
, or necessity that research be both academically sound and policy driven,
clinical trials in the humanitarian setting
(13 articles for each, [25.0%)];
informed consent
(10 articles [19.23%]);
cultural considerations
(6 articles, [11.54%]);
risks to researchers
(5 articles, [9.62%]);
child participation
(4 articles [7.69%]); and finally
mental health
, and
data ownership
(2 articles for each [3.85%]).
Conclusions
Interest in the ethics of studying humanitarian crises has been dramatically increasing in recent years. While key concepts within all research settings such as beneficence, justice and respect for persons are crucially relevant, there are considerations unique to the humanitarian context. The particular vulnerabilities of conflict-affected populations, the contextual challenges of working in humanitarian settings, and the need for ensuring strong community engagement at all levels make this area of research particularly challenging. Humanitarian crises are prevalent throughout the globe, and studying them with the utmost ethical forethought is critical to maintaining sound research principles and ethical standards.
Journal Article
A cell-based Papain-like Protease
by
Jimenez-Campos, Anahi G
,
Maestas, Lucas I
,
Mata-Solis, Yaniksa
in
Analysis
,
Antiviral agents
,
Proteolysis
2024
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and its variants are a continuous threat to human life. An urgent need remains for simple and fast tests that reliably detect active infections with SARS-CoV-2 and its variants in the early stage of infection. Here we introduce a simple and rapid activity-based diagnostic (ABDx) test that identifies SARS-CoV-2 infections by measuring the activity of a viral enzyme, Papain-Like protease (PLpro). The test system consists of a peptide that fluoresces when cleaved by SARS PLpro that is active in crude, unprocessed lysates from human tongue scrapes and saliva. Test results are obtained in 30 minutes or less using widely available fluorescence plate readers, or a battery-operated portable instrument for on-site testing. Proof-of-concept was obtained in a study on clinical specimens collected from patients with COVID-19 like symptoms who tested positive (n = 10) or negative (n = 10) with LIAT RT-PCR using nasal mid turbinate swabs. When saliva from these patients was tested with in-house endpoint RT-PCR, 17 were positive and only 5 specimens were negative, of which 2 became positive when tested 5 days later. PLpro activity correlated in 17 of these cases (3 out of 3 negatives and 14 out of 16 positives, with one invalid specimen). Despite the small number of samples, the agreement was significant (p value = 0.01). Two false negatives were detected, one from a sample with a late Ct value of 35 in diagnostic RT-PCR, indicating that an active infection was no longer present. The PLpro assay is easily scalable and expected to detect all viable SARS-CoV-2 variants, making it attractive as a screening and surveillance tool. Additionally, we show feasibility of the platform as a new homogeneous phenotypic assay for rapid screening of SARS-CoV-2 antiviral drugs and neutralizing antibodies.
Journal Article
Clinical, pathological and dermoscopic phenotype of MITF p.E318K carrier cutaneous melanoma patients
by
Parodi, Aurora
,
Spagnolo, Francesco
,
Bruno, William
in
Biomedical and Life Sciences
,
Biomedicine
,
Cancer
2020
Background
The p.E318K variant of the Melanocyte Inducing Transcription Factor (
MITF
) has been implicated in genetic predisposition to melanoma as an intermediate penetrance allele. However, the impact of this variant on clinico-phenotypic, as well as on dermoscopic patterns features of affected patients is not entirely defined. The purpose of our study was to assess the association between the p.E318K germline variant and clinic-phenotypical features of
MITF
+ compared to non-carriers (
MITF
−), including dermoscopic findings of melanomas and dysplastic nevi.
Methods
we retrospectively analyzed a consecutive series of 1386 patients recruited between 2000 and 2017 who underwent genetic testing for
CDKN2A
,
CDK4
,
MC1R
and
MITF
germline variants in our laboratory for diagnostic/research purposes. The patients were probands of melanoma-prone families and apparently sporadic single or multiple primary melanoma patients. For all, we collected clinical, pathological information and dermoscopic images of the histopathologically diagnosed melanomas and dysplastic nevi, when available.
Results
After excluding patients positive for
CDKN2A
/
CDK4
pathogenic variants and those affected by non-cutaneous melanomas, our study cohort comprised 984 cutaneous melanoma patients, 22
MITF
+ and 962
MITF
−.
MITF
+ were more likely to develop dysplastic nevi and multiple primary melanomas. Nodular melanoma was more common in
MITF
+ patients (32% compared to 19% in
MITF
−).
MITF
+ patients showed more frequently dysplastic nevi and melanomas with uncommon dermoscopic patterns (unspecific), as opposed to
MITF
− patients, whose most prevalent pattern was the multicomponent.
Conclusions
MITF
+ patients tend to develop melanomas and dysplastic nevi with histopathological features, frequency and dermoscopic patterns often different from those prevalent in
MITF
− patients. Our results emphasize the importance of melanoma prevention programs for
MITF
+ patients, including dermatologic surveillance with digital follow-up.
Journal Article
Italian Melanoma Intergroup tele-genetic counseling project for melanoma predisposition syndromes: five-year evaluation of effectiveness and outcomes
by
Carugno, Andrea
,
Pastorino, Lorenza
,
Ghiorzo, Paola
in
genetic counseling outcome scale
,
genomics outcome scale
,
Italian Melanoma Intergroup
2025
This study assessed the implementation of a tele-genetic counseling (TGC) pathway for hereditary melanoma risk using the culturally adapted Italian Melanoma Intergroup Tele-Genomics Outcome Scale (IMI-TGOS) questionnaire. Among 278 eligible patients, 177 (64%) completed the survey across three Italian centers. Responses showed high comprehension and perceived utility: 88% of participants reported understanding the information received, 96% recognized familial implications, and over 85% felt confident in managing risk and making decisions. While emotional responses were more varied, most respondents expressed confidence in future planning. These findings confirm the feasibility, acceptability, and informativeness of the IMI-TGOS in a remote counseling setting. The study supports the comparability of tele-genetic and in-person counseling in terms of understanding, retention, and decision-making. Moreover, the IMI-TGOS emerged as a promising tool for evaluating real-world genetic services. Broader adoption may help monitor outcomes and improve quality and equity in the expanding landscape of digital genetic care.
Journal Article
Special Issue “Molecular Advances in Cancer Genetics 3.0”
2024
The third volume of this Special Issue focuses on new advances in cancer genetics studies and collates papers reporting on a variety of mechanisms of tumorigenesis, the need to explore them from multiple perspectives, and the difficulties in exploring them, as well as the challenge of integrating them into a unifying but still different model for each tumor type [...]
Journal Article
A Glance at Molecular Advances in Cancer Genetics: A Baffling Puzzle Still to Be Solved
2023
The purpose of this first Special Issue is to provide a glance at the molecular advances in cancer genetics to untangle the complexity of tumorigenesis [...].The purpose of this first Special Issue is to provide a glance at the molecular advances in cancer genetics to untangle the complexity of tumorigenesis [...].
Journal Article