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result(s) for
"Busch, Melanie M. D"
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Late Quaternary Normal Faulting and Hanging Wall Basin Evolution of the Southwestern Rift Margin From Gravity and Geology, B.C.S., MX and Exploring the Influence of Text-Figure Format on Introductory Geology Learning
2011
An array of north-striking, left-stepping, active normal faults is situated along the southwestern margin of the Gulf of California. This normal fault system is the marginal fault system of the oblique-divergent plate boundary within the Gulf of California. To better understand the role of upper-crustal processes during development of an obliquely rifted plate margin, gravity surveys were conducted across the normal-fault-bounded basins within the gulf-margin array and, along with optically stimulated luminescence dating of offset surfaces, fault-slip rates were estimated and fault patterns across basins were assessed, providing insight into sedimentary basin evolution. Additionally, detailed geologic and geomorphic maps were constructed along two faults within the system, leading to a more complete understanding of the role of individual normal faults within a larger array. These faults slip at a low rate (0.1–1 mm/yr) and have relatively shallow hanging wall basins (∼500–3000 m). Overall, the gulf-margin faults accommodate protracted, distributed deformation at a low rate and provide a minor contribution to overall rifting. Integrating figures with text can lead to greater science learning than when either medium is presented alone. Textbooks, composed of text and graphics, are a primary source of content in most geology classes. It is essential to understand how students approach learning from text and figures in textbook-style learning materials and how the arrangement of the text and figures influences their learning approach. Introductory geology students were eye tracked while learning from textbook-style materials composed of text and graphics. Eye fixation data showed that students spent less time examining the figure than the text, but the students who more frequently examined the figure tended to improve more from the pretest to the posttest. In general, students tended to examine the figure at natural breaks in the reading. Textbook-style materials should, therefore, be formatted to include a number of natural breaks so that learners can pause to inspect the figure without the risk of losing their place in the reading and to provide a chance to process the material in small chunks. Multimedia instructional materials should be designed to support the cognitive processes of the learner.
Dissertation
Contrasting responses of above- and belowground diversity to multiple components of land-use intensity
by
Perović, David J.
,
Chisté, Melanie
,
Steffan-Dewenter, Ingolf
in
631/158/670
,
631/158/853
,
704/158/2453
2021
Land-use intensification is a major driver of biodiversity loss. However, understanding how different components of land use drive biodiversity loss requires the investigation of multiple trophic levels across spatial scales. Using data from 150 agricultural grasslands in central Europe, we assess the influence of multiple components of local- and landscape-level land use on more than 4,000 above- and belowground taxa, spanning 20 trophic groups. Plot-level land-use intensity is strongly and negatively associated with aboveground trophic groups, but positively or not associated with belowground trophic groups. Meanwhile, both above- and belowground trophic groups respond to landscape-level land use, but to different drivers: aboveground diversity of grasslands is promoted by diverse surrounding land-cover, while belowground diversity is positively related to a high permanent forest cover in the surrounding landscape. These results highlight a role of landscape-level land use in shaping belowground communities, and suggest that revised agroecosystem management strategies are needed to conserve whole-ecosystem biodiversity.
Land use intensification is a major driver of biodiversity change. Here the authors measure diversity across multiple trophic levels in agricultural grassland landscapes of varying management, finding decoupled responses of above- and belowground taxa to local factors and a strong impact of landscape-level land use.
Journal Article
Assessing intra-lab precision and inter-lab repeatability of outgrowth assays of HIV-1 latent reservoir size
by
Siliciano, Janet D.
,
Busch, Michael P.
,
Deng, Xutao
in
Acquired immune deficiency syndrome
,
AIDS
,
Analysis
2019
Quantitative viral outgrowth assays (QVOA) use limiting dilutions of CD4+ T cells to measure the size of the latent HIV-1 reservoir, a major obstacle to curing HIV-1. Efforts to reduce the reservoir require assays that can reliably quantify its size in blood and tissues. Although QVOA is regarded as a \"gold standard\" for reservoir measurement, little is known about its accuracy and precision or about how cell storage conditions or laboratory-specific practices affect results. Owing to this lack of knowledge, confidence intervals around reservoir size estimates-as well as judgments of the ability of therapeutic interventions to alter the size of the replication-competent but transcriptionally inactive latent reservoir-rely on theoretical statistical assumptions about dilution assays. To address this gap, we have carried out a Bayesian statistical analysis of QVOA reliability on 75 split samples of peripheral blood mononuclear cells (PBMC) from 5 antiretroviral therapy (ART)-suppressed participants, measured using four different QVOAs at separate labs, estimating assay precision and the effect of frozen cell storage on estimated reservoir size. We found that typical assay results are expected to differ from the true value by a factor of 1.6 to 1.9 up or down. Systematic assay differences comprised a 24-fold range between the assays with highest and lowest scales, likely reflecting differences in viral outgrowth readout and input cell stimulation protocols. We also found that controlled-rate freezing and storage of samples did not cause substantial differences in QVOA compared to use of fresh cells (95% probability of < 2-fold change), supporting continued use of frozen storage to allow transport and batched analysis of samples. Finally, we simulated an early-phase clinical trial to demonstrate that batched analysis of pre- and post-therapy samples may increase power to detect a three-fold reservoir reduction by 15 to 24 percentage points.
Journal Article
Ninjurin1 regulates striated muscle growth and differentiation
by
Regitz-Zagrosek, Vera
,
Merks, Anne M.
,
Busch, Katharina
in
Analysis
,
Angiotensin
,
Angiotensin II
2019
Chronic pressure overload due to aortic valve stenosis leads to pathological cardiac hypertrophy and heart failure. Hypertrophy is accompanied by an increase in myocyte surface area, which requires a proportional increase in the number of cell-cell and cell-matrix contacts to withstand enhanced workload. In a proteomic analysis we identified nerve injury-induced protein 1 (Ninjurin1), a 16kDa transmembrane cell-surface protein involved in cell adhesion and nerve repair, to be increased in hypertrophic hearts from patients with aortic stenosis. We hypothesised that Ninjurin1 is involved in myocyte hypertrophy. We analyzed cardiac biopsies from aortic-stenosis patients and control patients undergoing elective heart surgery. We studied cardiac hypertrophy in mice after transverse aortic constriction and angiotensin II infusions, and performed mechanistic analyses in cultured myocytes. We assessed the physiological role of ninjurin1 in zebrafish during heart and skeletal muscle development. Ninjurin1 was increased in hearts of aortic stenosis patients, compared to controls, as well as in hearts from mice with cardiac hypertrophy. Besides the 16kDa Ninjurin1 (Ninjurin1-16) we detected a 24kDa variant of Ninjurin1 (Ninjurin1-24), which was predominantly expressed during myocyte hypertrophy. We disclosed that the higher molecular weight of Ninjurin1-24 was caused by N-glycosylation. Ninjurin1-16 was contained in the cytoplasm of myocytes where it colocalized with stress-fibers. In contrast, Ninjurin1-24 was localized at myocyte membranes. Gain and loss-of-function experiments showed that Ninjurin1-24 plays a role in myocyte hypertrophy and myogenic differentiation in vitro. Reduced levels of ninjurin1 impaired cardiac and skeletal muscle development in zebrafish. We conclude that Ninjurin1 contributes to myocyte growth and differentiation, and that these effects are mainly mediated by N-glycosylated Ninjurin1-24.
Journal Article
The Local Group L-band Survey: Probing Cold Atomic Gas in IC10 with Neutral Hydrogen Absorption
by
Corbould, Harrisen
,
Koch, Eric W
,
Chen, Hongxing
in
Absorption
,
Coupling (molecular)
,
Dwarf galaxies
2025
We present the first localized detections of the cold neutral medium (CNM) in IC10, offering a rare view of dense atomic gas in a low-metallicity (0.27 solar metallicity) dwarf galaxy. As a low-metallicity starburst, IC10's interstellar medium conditions could reflect small-scale physical conditions that mirror those of early galaxies, providing a unique window into the heating and cooling processes that shaped the interstellar medium in early-Universe environments. Leveraging the high angular (<5'' ~ 15pc) and spectral (0.4 km/s) resolution of the Local Group L-band Survey, we searched for HI absorption against nine continuum radio sources and detected absorption along three sightlines corresponding to internal radio emission sources within IC10. Using Gaussian decomposition and radiative transfer, we characterize the CNM, deriving spin temperatures of ~30-55 K, column densities of (0.6-3.0)x 1\\(0^{21}\\) cm\\(^{-2}\\), cold HI fractions of ~ 21-37%, and line widths of ~ 5.6-13.6 km/s. For each individual detection of HI absorption, we find corresponding molecular emission from 12CO (J=1-0), HCO+ (J=1-0), and HCN (J=1-0) at similar velocities and with comparable linewidths, indicating a well-mixed cold atomic and molecular medium. In IC10, the CNM shows a clear kinematic connection to the high-density ISM, implying a stronger dynamical coupling with molecular gas than in the Milky Way, in line with expectations for low-metallicity environments. At the ~ 15 pc scales probed by slightly extended HII regions in IC10, unresolved CNM clouds likely contribute to line blending, so the observed broad HI linewidths may partly reflect spatial and kinematic averaging.
ALMA Central Molecular Zone Exploration Survey (ACES)-IV. Data of the two intermediate-width spectral windows
by
Sormani, Mattia C
,
Riquelme-Vasquez, Denise
,
Jimenez-Serra, Izaskun
in
Angular resolution
,
Angular velocity
,
Brightness
2026
We release the intermediate-width spectral window data from the ALMA Central Molecular Zone Exploration Survey (ACES) Large Program, which covers SiO(2-1), SO(2_2-1_1), H13CO+(1-0), H13CN(1-0), HN13C(1-0), and HC15N (1-0), among other molecular line transitions, with an angular resolution of ~2 arcsec and a velocity resolution of 1.7 km s-1 . The full cubes of the two spectral windows as well as the key data products will be available to the community. We also present the integrated brightness, peak brightness, centroid velocity, and Galactic longitude-velocity maps of the six lines. We briefly discuss morphological correlations between the continuum and the molecular line emission, and brightness ratios between pairs of isotopologue or isotopomer lines. We highlight features and trends in the data that will be followed up in upcoming ACES science papers.
ALMA Central Molecular Zone Exploration Survey (ACES) II: 3mm continuum images
by
Sormani, Mattia C
,
Santa-Maria, Miriam G
,
Pound, Marc W
in
Data processing
,
Image quality
,
Milky Way
2026
The ALMA Central Molecular Zone Exploration Survey, ACES, has mapped \\(1000\\) square arcminutes at 3 mm toward the center of our Galaxy. ACES provides the first large-scale, high-resolution (\\(2.5\\)\") view of the central \\(200\\) parsecs of the Milky Way. In this work, we describe the continuum data processing and present the continuum data products. In the combined mosaic of 45 individual ALMA mosaics, the typical RMS noise achieved is \\(0.1\\) mJy per \\(2.5\\)\" beam, though there is a tail of substantially higher noise toward regions with bright continuum structure, especially around Sgr A* and Sgr B2. In-band spectral indices are measurable for a small fraction of the brightest and most compact sources, enabling distinction between dust-dominated and free-free- or synchrotron-dominated sources. To recover emission on large angular scales, we present the GBT MUSTANG-2 Three millimeter Extended Nucleus Survey (TENS), a new 10\"resolution survey of the CMZ, which we combine with the ACES image by feathering. To demonstrate the quality and reliability of the ACES data, we compare to previously-published ALMA data obtained with higher resolution and sensitivity, finding overall good agreement with past results, but some disagreement toward the brightest sources.
ALMA Central molecular zone Exploration Survey (ACES) V: CS(2-1), SO(2_3-1_2), CH3CHO(5_1,4-4_1,3), HC3N(11-10), and H40a lines data
by
Sormani, Mattia C
,
Santa-Maria, Miriam G
,
Pound, Marc W
in
Angular resolution
,
Astrochemistry
,
Gas dynamics
2026
We present data from the ALMA Central Molecular Zone Exploration Survey (ACES) Large Program, which provides broad spectral-line and 3 mm continuum coverage of the Central Molecular Zone (CMZ) at a spatial resolution of 0.1 pc. The survey delivers homogeneous, wide-field mosaics that enable direct comparisons of the physical and chemical conditions across diverse environments in the Galactic center. In this data release paper, we present the CS(2-1), SO(2_3-1_2), CH3CHO(5_1,4-4_1,3), HC3N(11-10), and H40a lines observed simultaneously within two broad spectral windows. These lines reveal pronounced spatial and chemical variations across the CMZ, tracing distinct components of molecular gas, shock-affected regions, and ionized structures. The high angular resolution and multi-line capability of the ACES dataset make it a powerful resource for future studies of gas dynamics, star formation activity, and the physical connection between the CMZ and Sgr A*.