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The African continent hosts some of the largest freshwater systems worldwide, characterized by a large distribution and variability of surface waters that play a key role in the water, energy and carbon cycles and are of major importance to the global climate and water resources. Freshwater availability in Africa has now become of major concern under the combined effect of climate change, environmental alterations and anthropogenic pressure. However, the hydrology of the African river basins remains one of the least studied worldwide and a better monitoring and understanding of the hydrological processes across the continent become fundamental. Earth Observation, that offers a cost-effective means for monitoring the terrestrial water cycle, plays a major role in supporting surface hydrology investigations. Remote sensing advances are therefore a game changer to develop comprehensive observing systems to monitor Africa’s land water and manage its water resources. Here, we review the achievements of more than three decades of advances using remote sensing to study surface waters in Africa, highlighting the current benefits and difficulties. We show how the availability of a large number of sensors and observations, coupled with models, offers new possibilities to monitor a continent with scarce gauged stations. In the context of upcoming satellite missions dedicated to surface hydrology, such as the Surface Water and Ocean Topography (SWOT), we discuss future opportunities and how the use of remote sensing could benefit scientific and societal applications, such as water resource management, flood risk prevention and environment monitoring under current global change.Article HighlightsThe hydrology of African surface water is of global importance, yet it remains poorly monitored and understoodComprehensive review of remote sensing and modeling advances to monitor Africa’s surface water and water resourcesFuture opportunities with upcoming satellite missions and to translate scientific advances into societal applications

A consistent dataset of lake surface water temperature, ice cover, water-leaving reflectance, water level and extent is presented. The collection constitutes the Lakes Essential Climate Variable (ECV) for inland waters. The data span combined satellite observations from 1992 to 2020 inclusive and quantifies over 2000 relatively large lakes, which represent a small fraction of the number of lakes worldwide but a significant fraction of global freshwater surface. Visible and near-infrared optical imagery, thermal imagery and microwave radar data from satellites have been exploited. All observations are provided in a common grid at 1/120° latitude-longitude resolution, jointly in daily files. The data/algorithms have been validated against in situ measurements where possible. Consistency analysis between the variables has guided the development of the joint dataset. It is the most complete collection of consistent satellite observations of the Lakes ECV currently available. Lakes are of significant interest to scientific disciplines such as hydrology, limnology, climatology, biogeochemistry and geodesy. They are a vital resource for freshwater supply, and key sentinels for global environmental change. Measurement(s) Lake surface water temperature, lake water extent and level, lake ice cover, lake water leaving reflectance Technology Type(s) Radar altimeters, radiometers, spectrometers, and multispectral scanner systems Sample Characteristic - Organism Inland water Sample Characteristic - Environment Satellite imaging Sample Characteristic - Location Earth global

In habitat modelling, environmental variables are assumed to be proxies of lower trophic levels distribution and by extension, of marine top predator distributions. More proximal variables, such as potential prey fields, could refine relationships between top predator distributions and their environment. In situ data on prey distributions are not available over large spatial scales but, a numerical model, the Spatial Ecosystem And POpulation DYnamics Model (SEAPODYM), provides simulations of the biomass and production of zooplankton and six functional groups of micronekton at the global scale. Here, we explored whether generalised additive models fitted to simulated prey distribution data better predicted deep-diver densities (here beaked whales Ziphiidae and sperm whales Physeter macrocephalus ) than models fitted to environmental variables. We assessed whether the combination of environmental and prey distribution data would further improve model fit by comparing their explanatory power. For both taxa, results were suggestive of a preference for habitats associated with topographic features and thermal fronts but also for habitats with an extended euphotic zone and with large prey of the lower mesopelagic layer. For beaked whales, no SEAPODYM variable was selected in the best model that combined the two types of variables, possibly because SEAPODYM does not accurately simulate the organisms on which beaked whales feed on. For sperm whales, the increase model performance was only marginal. SEAPODYM outputs were at best weakly correlated with sightings of deep-diving cetaceans, suggesting SEAPODYM may not accurately predict the prey fields of these taxa. This study was a first investigation and mostly highlighted the importance of the physiographic variables to understand mechanisms that influence the distribution of deep-diving cetaceans. A more systematic use of SEAPODYM could allow to better define the limits of its use and a development of the model that would simulate larger prey beyond 1,000 m would probably better characterise the prey of deep-diving cetaceans.

Data sets from three laboratories conducting studies of movements and migrations of Atlantic swordfish (Xiphias gladius) using pop-up satellite archival tags were pooled, and processed using a common methodology. From 78 available deployments, 38 were selected for detailed examination based on deployment duration. The points of deployment ranged from southern Newfoundland to the Straits of Florida. The aggregate data comprise the most comprehensive information describing migrations of swordfish in the Atlantic. Challenges in using data from different tag manufacturers are discussed. The relative utility of geolocations obtained with light is compared with results derived from temperature information for this deep-diving species. The results show that fish tagged off North America remain in the western Atlantic throughout their deployments. This is inconsistent with the model of stock structure used in assessments conducted by the International Commission for the Conservation of Atlantic Tunas, which assumes that fish mix freely throughout the North Atlantic.

IPCC-type climate models have produced simulations of the oceanic environment that can be used to drive models of upper trophic levels to explore the impact of climate change on marine resources. We use the Spatial Ecosystem And Population Dynamics Model (SEAPODYM) to investigate the potential impact of Climate change under IPCC A2 scenario on Pacific skipjack tuna ( Katsuwonus pelamis ). IPCC-type models are still coarse in resolution and can produce significant anomalies, e.g., in water temperature. These limitations have direct and strong effects when modeling the dynamics of marine species. Therefore, parameter estimation experiments based on assimilation of historical fishing data are necessary to calibrate the model to these conditions before exploring the future scenarios. A new simulation based on corrected temperature fields of the A2 simulation from one climate model (IPSL-CM4) is presented. The corrected fields led to a new parameterization close to the one achieved with more realistic environment from an ocean reanalysis and satellite-derived primary production. Projected changes in skipjack population under simple fishing effort scenarios are presented. The skipjack catch and biomass is predicted to slightly increase in the Western Central Pacific Ocean until 2050 then the biomass stabilizes and starts to decrease after 2060 while the catch reaches a plateau. Both feeding and spawning habitat become progressively more favourable in the eastern Pacific Ocean and also extend to higher latitudes, while the western equatorial warm pool is predicted to become less favorable for skipjack spawning.

Aim Understanding the environmental drivers of movement and habitat use of highly migratory marine species is crucial to implement appropriate management and conservation measures. However, this requires quantitative information on their spatial and temporal presence, which is limited in the high seas. Here, we aimed to gain insights of the essential habitats of three baleen whale species around the mid‐North Atlantic (NA) region, linking their large‐scale movements with information on oceanographic and biological processes. Location Mid‐NA Ocean. Methods We present the first study combining data from 31 satellite tracks of baleen whales (15, 10 and 6 from fin, blue and sei whales, respectively) from March to July (2008–2016) with data on remotely sensed oceanography and mid‐ and lower trophic level biomass derived from the spatial ecosystem and population dynamics model (SEAPODYM). A Bayesian switching state‐space model was applied to obtain regular tracks and correct for location errors, and pseudo‐absences were created through simulated positions using a correlated random walk model. Based on the tracks and pseudo‐absences, we applied generalized additive mixed models (GAMMs) to determine the probability of occurrence and predict monthly distributions. Results This study provides the most detailed research on the spatio‐temporal distribution of baleen whales in the mid‐NA, showing how dynamic biophysical processes determine their habitat preference. Movement patterns were mainly influenced by the interaction of temperature and the lower trophic level biomass; however, this relationship differed substantially among species. Best‐fit models suggest that movements of whales migrating towards more productive areas in northern latitudes were constrained by depth and eddy kinetic energy. Main conclusions These novel insights highlight the importance of integrating telemetry data with spatially explicit prey models to understand which factors shape the movement patterns of highly migratory species across large geographical scales. In addition, our outcomes could contribute to inform management of anthropogenic threats to baleen whales in sparsely surveyed region.

This study is the first report of post-nesting migrations of loggerhead sea turtles (Caretta caretta) nesting in Sarasota County (Florida, USA), their most important rookery in the Gulf of Mexico (GOM). In total, 28 females (curved carapace length CCL between 82.2 and 112.0 cm) were satellite-tracked between May 2005 and December 2007. Post-nesting migrations were completed in 3-68 days (mean ± SD = 23 ± 16 days). Five different migration patterns were observed: six turtles remained in the vicinity of their nesting site while the other individuals moved either to the south-western part of the Florida Shelf (n = 9 turtles), the Northeast GOM (n = 2 turtles), the South GOM (Yucatán Shelf and Campeche Bay, Mexico, and Cuba; n = 5 turtles) or the Bahamas (n = 6 turtles). In average, turtles moved along rather straight routes over the continental shelf but showed more indirect paths in oceanic waters. Path analyses coupled with remote sensing oceanographic data suggest that most of long-distance migrants reached their intended foraging destinations but did not compensate for the deflecting action of ocean currents. While six out of seven small individuals (CCL < 90 cm) remained on the Florida Shelf, larger individuals showed various migration strategies, staying on the Florida Shelf or moving to long-distance foraging grounds. This study highlights the primary importance the Western Florida Shelf in the management of the Florida Nesting Subpopulation, as well as the need of multi-national effort to promote the conservation of the loggerhead turtle in the Western Atlantic.

In habitat modelling, environmental variables are assumed to be proxies of lower trophic levels distribution and by extension, of marine top predator distributions. More proximal variables, such as potential prey fields, could refine relationships between top predator distributions and their environment. In situ data on prey distributions are not available over large spatial scales but, a numerical model, the Spatial Ecosystem And POpulation DYnamics Model (SEAPODYM), provides simulations of the biomass and production of zooplankton and six functional groups of micronekton at the global scale. Here, we explored whether generalised additive models fitted to simulated prey distribution data better predicted deep-diver densities (here beaked whales Ziphiidae and sperm whales Physeter macrocephalus) than models fitted to environmental variables. We assessed whether the combination of environmental and prey distribution data would further improve model fit by comparing their explanatory power. For both taxa, results were suggestive of a preference for habitats associated with topographic features and thermal fronts but also for habitats with an extended euphotic zone and with large prey of the lower mesopelagic layer. For beaked whales, no SEAPODYM variable was selected in the best model that combined the two types of variables, possibly because SEAPODYM does not accurately simulate the organisms on which beaked whales feed on. For sperm whales, the increase model performance was only marginal. SEAPODYM outputs were at best weakly correlated with sightings of deep-diving cetaceans, suggesting SEAPODYM may not accurately predict the prey fields of these taxa. This study was a first investigation and mostly highlighted the importance of the physiographic variables to understand mechanisms that influence the distribution of deep-diving cetaceans. A more systematic use of SEAPODYM could allow to better define the limits of its use and a development of the model that would simulate larger prey beyond 1,000 m would probably better characterise the prey of deep-diving cetaceans.

Data sets from three laboratories conducting studies of movements and migrations of Atlantic swordfish (Xiphias gladius) using pop-up satellite archival tags were pooled, and processed using a common methodology. From 78 available deployments, 38 were selected for detailed examination based on deployment duration. The points of deployment ranged from southern Newfoundland to the Straits of Florida. The aggregate data comprise the most comprehensive information describing migrations of swordfish in the Atlantic. Challenges in using data from different tag manufacturers are discussed. The relative utility of geolocations obtained with light is compared with results derived from temperature information for this deep-diving species. The results show that fish tagged off North America remain in the western Atlantic throughout their deployments. This is inconsistent with the model of stock structure used in assessments conducted by the International Commission for the Conservation of Atlantic Tunas, which assumes that fish mix freely throughout the North Atlantic.