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"Chen, Xiangjun"
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A wearable cardiac ultrasound imager
2023
Continuous imaging of cardiac functions is highly desirable for the assessment of long-term cardiovascular health, detection of acute cardiac dysfunction and clinical management of critically ill or surgical patients
1
–
4
. However, conventional non-invasive approaches to image the cardiac function cannot provide continuous measurements owing to device bulkiness
5
–
11
, and existing wearable cardiac devices can only capture signals on the skin
12
–
16
. Here we report a wearable ultrasonic device for continuous, real-time and direct cardiac function assessment. We introduce innovations in device design and material fabrication that improve the mechanical coupling between the device and human skin, allowing the left ventricle to be examined from different views during motion. We also develop a deep learning model that automatically extracts the left ventricular volume from the continuous image recording, yielding waveforms of key cardiac performance indices such as stroke volume, cardiac output and ejection fraction. This technology enables dynamic wearable monitoring of cardiac performance with substantially improved accuracy in various environments.
Innovations in device design, material fabrication and deep learning are described, leading to a wearable ultrasound transducer capable of dynamic cardiac imaging in various environments and under different conditions.
Journal Article
A fully integrated wearable ultrasound system to monitor deep tissues in moving subjects
2024
Recent advances in wearable ultrasound technologies have demonstrated the potential for hands-free data acquisition, but technical barriers remain as these probes require wire connections, can lose track of moving targets and create data-interpretation challenges. Here we report a fully integrated autonomous wearable ultrasonic-system-on-patch (USoP). A miniaturized flexible control circuit is designed to interface with an ultrasound transducer array for signal pre-conditioning and wireless data communication. Machine learning is used to track moving tissue targets and assist the data interpretation. We demonstrate that the USoP allows continuous tracking of physiological signals from tissues as deep as 164 mm. On mobile subjects, the USoP can continuously monitor physiological signals, including central blood pressure, heart rate and cardiac output, for as long as 12 h. This result enables continuous autonomous surveillance of deep tissue signals toward the internet-of-medical-things.
A wearable ultrasound patch monitors subjects in motion using machine learning and wireless electronics.
Journal Article
Akkermansia muciniphila phospholipid induces homeostatic immune responses
by
Cassilly, Chelsi D.
,
Bolze, Andrew S.
,
Liu, Zehua
in
631/326/41/2533
,
631/45
,
Akkermansia - chemistry
2022
Multiple studies have established associations between human gut bacteria and host physiology, but determining the molecular mechanisms underlying these associations has been challenging
1
–
3
.
Akkermansia muciniphila
has been robustly associated with positive systemic effects on host metabolism, favourable outcomes to checkpoint blockade in cancer immunotherapy and homeostatic immunity
4
–
7
. Here we report the identification of a lipid from
A. muciniphila
’s cell membrane that recapitulates the immunomodulatory activity of
A. muciniphila
in cell-based assays
8
. The isolated immunogen, a diacyl phosphatidylethanolamine with two branched chains (a15:0-i15:0 PE), was characterized through both spectroscopic analysis and chemical synthesis. The immunogenic activity of a15:0-i15:0 PE has a highly restricted structure–activity relationship, and its immune signalling requires an unexpected toll-like receptor TLR2–TLR1 heterodimer
9
,
10
. Certain features of the phospholipid’s activity are worth noting: it is significantly less potent than known natural and synthetic TLR2 agonists; it preferentially induces some inflammatory cytokines but not others; and, at low doses (1% of EC
50
) it resets activation thresholds and responses for immune signalling. Identifying both the molecule and an equipotent synthetic analogue, its non-canonical TLR2–TLR1 signalling pathway, its immunomodulatory selectivity and its low-dose immunoregulatory effects provide a molecular mechanism for a model of
A. muciniphila’
s ability to set immunological tone and its varied roles in health and disease.
Overall, this study describes the molecular mechanism of a druggable pathway that recapitulates in cellular assays the immunomodulatory effects associated with
Akkermansia muciniphila
,
a prominent member of the gut microbiota.
Journal Article
Rolling bearing fault diagnosis under small sample conditions based on WDCNN-BiLSTM Siamese network
2025
Rolling bearings are a crucial component in rotating machinery, essential for ensuring the smooth functioning of the entire system. However, their vulnerability to damage necessitates the implementation of effective fault diagnosis. Traditional deep learning methods often struggle due to the scarcity of fault samples, leading to issues like overfitting and inadequate generalization. To address this problem, a novel Siamese Neural Network (SNN) model, integrating Deep Convolutional Neural Networks with Wide First-layer Kernel (WDCNN) and Bidirectional Long Short-Term Memory (BiLSTM) network is proposed. This model constructs a feature extraction system that combines WDCNN and BiLSTM to extract local spatial features and global temporal dependencies from vibration signals. Additionally, the SNN framework is introduced to build a feature space under small sample conditions through metric learning, enhancing the ability of model to discern sample similarities. Experiments on the CWRU and HUST datasets indicate that with only 90 training samples, the model achieves diagnostic accuracy of 83.47% and 61.48%, respectively, significantly surpassing CNN, BiLSTM, and their combined models. Furthermore, the model also shows robustness against severe noise interference, making it a viable tool for efficient fault diagnosis in rolling bearings with limited data.
Journal Article
A photoacoustic patch for three-dimensional imaging of hemoglobin and core temperature
by
Gao, Xiaoxiang
,
Ma, Yuxiang
,
Ding, Hong
in
639/301/1005/1009
,
639/624/1111/1115
,
639/766/930/2735
2022
Electronic patches, based on various mechanisms, allow continuous and noninvasive monitoring of biomolecules on the skin surface. However, to date, such devices are unable to sense biomolecules in deep tissues, which have a stronger and faster correlation with the human physiological status than those on the skin surface. Here, we demonstrate a photoacoustic patch for three-dimensional (3D) mapping of hemoglobin in deep tissues. This photoacoustic patch integrates an array of ultrasonic transducers and vertical-cavity surface-emitting laser (VCSEL) diodes on a common soft substrate. The high-power VCSEL diodes can generate laser pulses that penetrate >2 cm into biological tissues and activate hemoglobin molecules to generate acoustic waves, which can be collected by the transducers for 3D imaging of the hemoglobin with a high spatial resolution. Additionally, the photoacoustic signal amplitude and temperature have a linear relationship, which allows 3D mapping of core temperatures with high accuracy and fast response. With access to biomolecules in deep tissues, this technology adds unprecedented capabilities to wearable electronics and thus holds significant implications for various applications in both basic research and clinical practice.
The authors present a wearable photoacoustic patch, which integrates laser diodes and piezoelectric transducers for three-dimensional imaging of hemoglobin and temperature in deep tissues.
Journal Article
Analysis of Resistance in Magnetic Flux Leakage (MFL) Detectors for Natural Gas Pipelines
by
Han, Guozhao
,
Tian, Guansan
,
Chen, Xiangjun
in
Analysis
,
Composite materials
,
Data processing
2024
This study systematically explores the sources and influencing factors of resistance encountered by magnetic flux leakage (MFL) detectors in natural gas pipelines through a theoretical analysis, experimental investigation, and numerical simulation. The research methodology involves the development of a fluid–structure interaction model using ABAQUS 2023 finite element software, complemented by the design and implementation of a pull-testing platform for MFL detectors. This platform simulates detector operation under various interference conditions and quantifies the resulting frictional resistance. The findings reveal that the primary source of frictional resistance is the contact interaction between the MFL detector and the pipeline wall. Key factors influencing the magnitude of this resistance include the detector’s mass, the structural design and materials of the sealing cups and support plates, as well as the surface roughness of the pipeline. Both experimental results and numerical simulations demonstrate a pronounced increase in frictional resistance with heightened interference levels. The theoretical model exhibits strong agreement with experimental data, though deviations are observed under conditions of severe interference. This study provides a detailed understanding of frictional resistance patterns under diverse structural and operational scenarios, offering both theoretical guidance and practical recommendations for the design of low-resistance MFL detectors.
Journal Article
An observational and genetic investigation into the association between psoriasis and risk of malignancy
by
Hu, Jinbo
,
Zeng, Qinglian
,
Chen, Xiangjun
in
631/208/205
,
631/208/2489/68
,
631/250/249/1313/1758
2024
The relationship between psoriasis and site-specific cancers remains unclear. Here, we aim to investigate whether psoriasis is causally associated with site-specific cancers. We use observational and genetic data from the UK Biobank, obtaining GWAS summary data, eQTL analysis data, TCGA data, and GTEx data from public datasets. We perform PheWAS, polygenic risk score analysis, and one-sample and two-sample Mendelian randomization analyses to investigate the potential causal associations between psoriasis and cancers. In the unselected PheWAS analysis, psoriasis is associated with higher risks of 16 types of cancer. Using one-sample Mendelian randomization analyses, it is found that genetically predicted psoriasis is associated with higher risks of anal canal cancer, breast cancer, follicular non-Hodgkin’s lymphoma and nonmelanoma skin cancer in women; and lung cancer and kidney cancer in men. Our two-sample Mendelian randomization analysis indicates that psoriasis is causally associated with breast cancer and lung cancer. Gene annotation shows that psoriasis-related genes, such as ERAP1, are significantly different in lung and breast cancer tissues. Taken together, clinical attention to lung cancer and breast cancer may be warranted among patients with psoriasis.
The relationship between psoriasis and cancer remains unclear. Here, the authors use PheWAS, polygenic risk scores, and Mendelian randomization analyses to demonstrate that psoriasis is causally associated with lung and breast cancer.
Journal Article
Cholesterol metabolism: physiological regulation and diseases
2024
Cholesterol homeostasis is crucial for cellular and systemic function. The disorder of cholesterol metabolism not only accelerates the onset of cardiovascular disease (CVD) but is also the fundamental cause of other ailments. The regulation of cholesterol metabolism in the human is an extremely complex process. Due to the dynamic balance between cholesterol synthesis, intake, efflux and storage, cholesterol metabolism generally remains secure. Disruption of any of these links is likely to have adverse effects on the body. At present, increasing evidence suggests that abnormal cholesterol metabolism is closely related to various systemic diseases. However, the exact mechanism by which cholesterol metabolism contributes to disease pathogenesis remains unclear, and there are still unknown factors. In this review, we outline the metabolic process of cholesterol in the human body, especially reverse cholesterol transport (RCT). Then, we discuss separately the impact of abnormal cholesterol metabolism on common diseases and potential therapeutic targets for each disease, including CVD, tumors, neurological diseases, and immune system diseases. At the end of this review, we focus on the effect of cholesterol metabolism on eye diseases. In short, we hope to provide more new ideas for the pathogenesis and treatment of diseases from the perspective of cholesterol. At present, increasing evidence suggests that abnormal cholesterol metabolism is closely related to various systemic diseases, including cardiovascular disease, tumors, neurological conditions immune system disorders, and eye diseases. Cholesterol overload caused by abnormal cholesterol metabolism can induce elevated oxidative stress, heightened inflammatory responses, reduced autophagy, and increased apoptosis in cells through various signaling pathways, ultimately accelerating the development of diseases. Therefore, this review will summarize the relationship between cholesterol metabolism and common diseases and aim to provide new perspectives for the pathogenesis of diseases.
Journal Article
Proteomic and histopathological characterisation of sicca subjects and primary Sjögren’s syndrome patients reveals promising tear, saliva and extracellular vesicle disease biomarkers
by
Jensen, Janicke Liaaen
,
Thiede, Bernd
,
Galtung, Hilde Kanli
in
Adult
,
Aged
,
Annexin A1 - metabolism
2019
Background
Mononuclear cell infiltration of exocrine glands, production of Ro/SSA and La/SSB autoantibodies, along with oral and ocular dryness, are characteristic features of primary Sjögren’s syndrome (pSS). Non-SS sicca subjects, an underexplored group in relation to pSS, display similar sicca symptoms, with possible mild signs of inflammation in their salivary glands, yet with no serological detection of autoantibody production. In this study, we investigated inflammatory manifestations in the salivary gland tissue, tear fluid and saliva of non-SS subjects, as compared to pSS patients and healthy individuals.
Methods
Fifteen non-SS, 10 pSS and 10 healthy subjects were included in the analyses. Histological evaluation of salivary gland biopsies was performed. Liquid chromatography-mass spectrometry (LC-MS) was conducted on tear fluid and stimulated whole saliva, and proteomic biomarker profiles were generated. Extracellular vesicle (EVs) isolation and characterisation from both fluids were also combined with LC-MS. The LC-MS data were analysed for quantitative differences between patient and control groups using Scaffold. Database for Annotation, Visualization and Integrated Discovery (DAVID) and Functional Enrichment Analysis Tool (FunRich) were applied for functional analyses.
Results
Histopathological evaluation of salivary gland biopsies showed implications of milder inflammation in non-SS subjects through mononuclear cell infiltration, fibrosis and fatty replacement, as compared to pSS patients. Although unaffected in the non-SS group, upregulation of proinflammatory pathways and proteins involved in ubiquitination (LMO7 and HUWE1) and B cell differentiation (TPD52) were detected in tear fluid of pSS patients. Moreover, overexpression of proteins STOM, ANXA4 and ANXA1, regulating cellular innate and adaptive immunological pathways, were further identified in EVs from tear fluid of pSS patients. Finally, whole saliva and EVs isolated from whole saliva of pSS patients expressed proteins vital for innate MHC class I cellular regulation (NGAL) and T cell activation (CD44).
Conclusions
Non-SS sicca subjects may show implications of mild inflammation in their glandular tissue, while their protein profile was strikingly more similar to healthy controls than to pSS patients. Hence, the tear and salivary biomarkers identified could be implemented as potential non-invasive diagnostic tools that may aid in increasing diagnostic accuracy when evaluating non-SS subjects and pSS patients and monitoring disease progression.
Journal Article
HostNet: improved sequence representation in deep neural networks for virus-host prediction
2023
Background
The escalation of viruses over the past decade has highlighted the need to determine their respective hosts, particularly for emerging ones that pose a potential menace to the welfare of both human and animal life. Yet, the traditional means of ascertaining the host range of viruses, which involves field surveillance and laboratory experiments, is a laborious and demanding undertaking. A computational tool with the capability to reliably predict host ranges for novel viruses can provide timely responses in the prevention and control of emerging infectious diseases. The intricate nature of viral-host prediction involves issues such as data imbalance and deficiency. Therefore, developing highly accurate computational tools capable of predicting virus-host associations is a challenging and pressing demand.
Results
To overcome the challenges of virus-host prediction, we present HostNet, a deep learning framework that utilizes a Transformer-CNN-BiGRU architecture and two enhanced sequence representation modules. The first module, k-mer to vector, pre-trains a background vector representation of k-mers from a broad range of virus sequences to address the issue of data deficiency. The second module, an adaptive sliding window, truncates virus sequences of various lengths to create a uniform number of informative and distinct samples for each sequence to address the issue of data imbalance. We assess HostNet's performance on a benchmark dataset of “Rabies lyssavirus” and an in-house dataset of “Flavivirus”. Our results show that HostNet surpasses the state-of-the-art deep learning-based method in host-prediction accuracies and F1 score. The enhanced sequence representation modules, significantly improve HostNet's training generalization, performance in challenging classes, and stability.
Conclusion
HostNet is a promising framework for predicting virus hosts from genomic sequences, addressing challenges posed by sparse and varying-length virus sequence data. Our results demonstrate its potential as a valuable tool for virus-host prediction in various biological contexts. Virus-host prediction based on genomic sequences using deep neural networks is a promising approach to identifying their potential hosts accurately and efficiently, with significant impacts on public health, disease prevention, and vaccine development.
Journal Article