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result(s) for
"Cluzeau,"
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Development of the AGREE II, part 2: assessment of validity of items and tools to support application
by
Burgers, Jako S.
,
Brouwers, Melissa C.
,
Cluzeau, Françoise
in
Analysis
,
Clinical medicine
,
Evaluation
2010
We established a program of research to improve the development, reporting and evaluation of practice guidelines. We assessed the construct validity of the items and user's manual in the β version of the AGREE II.
We designed guideline excerpts reflecting high- and low-quality guideline content for 21 of the 23 items in the tool. We designed two study packages so that one low-quality and one high-quality version of each item were randomly assigned to each package. We randomly assigned 30 participants to one of the two packages. Participants reviewed and rated the guideline content according to the instructions of the user's manual and completed a survey assessing the manual.
In all cases, content designed to be of high quality was rated higher than low-quality content; in 18 of 21 cases, the differences were significant (p < 0.05). The manual was rated by participants as appropriate, easy to use, and helpful in differentiating guidelines of varying quality, with all scores above the mid-point of the seven-point scale. Considerable feedback was offered on how the items and manual of the β-AGREE II could be improved.
The validity of the items was established and the user's manual was rated as highly useful by users. We used these results and those of our study presented in part 1 to modify the items and user's manual. We recommend AGREE II (available at www.agreetrust.org) as the revised standard for guideline development, reporting and evaluation.
Journal Article
Analysis and modelling of Reynolds stresses in turbulent bubbly up-flows from direct numerical simulations
2019
Two-phase bubbly flows are found in many industrial applications. These flows involve complex local phenomena that are still poorly understood. For instance, two-phase turbulence modelling is still commonly based on single-phase flow analyses. A direct numerical simulation (DNS) database is described here to improve the understanding of two-phase turbulent channel flow at a parietal Reynolds number of 127. Based on DNS results, a physical interpretation of the Reynolds stress and momentum budgets is proposed. First, surface tension is found to be the strongest force in the direction of migration so that budgets of the momentum equations suggest a significant impact of surface tension in the migration process, whereas most modelling used in industrial application does not include it. Besides, the suitability of the design of our cases to study the interaction between bubble-induced fluctuations (BIF) and single-phase turbulence (SPT) is shown. Budgets of the Reynolds stress transport equation computed from DNS reveal an interaction between SPT and BIF, revealing weaknesses in the classical way in which pseudoturbulence and perturbations to standard single-phase turbulence are modelled. An SPT reduction is shown due to changes in the diffusion because of the presence of bubbles. An increase of the redistribution leading to a more isotropic SPT has been observed as well. BIF is comprised of a turbulent (wake-induced turbulence, WIT) and a non-turbulent (wake-induced fluctuations, WIF) part which are statistically independent. WIF is related to averaged wake and potential flow, whereas WIT appears when wakes become unstable or interact with each other for high-velocity bubbles. In the present low gravity conditions, BIF is reduced to WIF only. A thorough analysis of the transport equations of the Reynolds stresses is performed in order to propose an algebraic closure for the WIF towards an innovative two-phase turbulence model.
Journal Article
Human and mouse neuroinflammation markers in Niemann-Pick disease, type C1
by
Porter, Forbes D.
,
Cluzeau, Celine V. M.
,
Siebel, Stephan
in
1-Deoxynojirimycin - analogs & derivatives
,
1-Deoxynojirimycin - therapeutic use
,
Adolescent
2014
Niemann-Pick disease, type C1 (NPC1) is an autosomal recessive lipid storage disorder in which a pathological cascade, including neuroinflammation occurs. While data demonstrating neuroinflammation is prevalent in mouse models, data from NPC1 patients is lacking. The current study focuses on identifying potential markers of neuroinflammation in NPC1 from both the
Npc1
mouse model and NPC1 patients. We identified in the mouse model significant changes in expression of genes associated with inflammation and compared these results to the pattern of expression in human cortex and cerebellar tissue. From gene expression array analysis, complement 3 (
C3
) was increased in mouse and human post-mortem NPC1 brain tissues. We also characterized protein levels of inflammatory markers in cerebrospinal fluid (CSF) from NPC1 patients and controls. We found increased levels of interleukin 3, chemokine (C-X-C motif) ligand 5, interleukin 16 and chemokine ligand 3 (CCL3), and decreased levels of interleukin 4, 10, 13 and 12p40 in CSF from NPC1 patients. CSF markers were evaluated with respect to phenotypic severity. Miglustat treatment in NPC1 patients slightly decreased IL-3, IL-10 and IL-13 CSF levels; however, further studies are needed to establish a strong effect of miglustat on inflammation markers. The identification of inflammatory markers with altered levels in the cerebrospinal fluid of NPC1 patients may provide a means to follow secondary events in NPC1 disease during therapeutic trials.
Journal Article
Development of the AGREE II, part 1: performance, usefulness and areas for improvement
by
Burgers, Jako S.
,
Brouwers, Melissa C.
,
Browman, George P.
in
Analysis
,
Clinical outcomes
,
Evaluation Studies as Topic
2010
We undertook research to improve the AGREE instrument, a tool used to evaluate guidelines. We tested a new seven-point scale, evaluated the usefulness of the original items in the instrument, investigated evidence to support shorter, tailored versions of the tool, and identified areas for improvement.
We report on one component of a larger study that used a mixed design with four factors (user type, clinical topic, guideline and condition). For the analysis reported in this article, we asked participants to read a guideline and use the AGREE items to evaluate it based on a seven-point scale, to complete three outcome measures related to adoption of the guideline, and to provide feedback on the instrument's usefulness and how to improve it.
Guideline developers gave lower-quality ratings than did clinicians or policy-makers. Five of six domains were significant predictors of participants' outcome measures (p < 0.05). All domains and items were rated as useful by stakeholders (mean scores > 4.0) with no significant differences by user type (p > 0.05). Internal consistency ranged between 0.64 and 0.89. Inter-rater reliability was satisfactory. We received feedback on how to improve the instrument.
Quality ratings of the AGREE domains were significant predictors of outcome measures associated with guideline adoption: guideline endorsements, overall intentions to use guidelines, and overall quality of guidelines. All AGREE items were assessed as useful in determining whether a participant would use a guideline. No clusters of items were found more useful by some users than others. The measurement properties of the seven-point scale were promising. These data contributed to the refinements and release of the AGREE II.
Journal Article
Quantitative Proteomic Analysis of Niemann-Pick Disease, Type C1 Cerebellum Identifies Protein Biomarkers and Provides Pathological Insight
by
Porter, Forbes D.
,
Yergey, Alfred L.
,
Cluzeau, Celine V. M.
in
Alzheimer Disease - genetics
,
Alzheimer's disease
,
Animal models
2012
Niemann-Pick disease, type C1 (NPC1) is a fatal, neurodegenerative disorder for which there is no definitive therapy. In NPC1, a pathological cascade including neuroinflammation, oxidative stress and neuronal apoptosis likely contribute to the clinical phenotype. While the genetic cause of NPC1 is known, we sought to gain a further understanding into the pathophysiology by identifying differentially expressed proteins in Npc1 mutant mouse cerebella. Using two-dimensional gel electrophoresis and mass spectrometry, 77 differentially expressed proteins were identified in Npc1 mutant mice cerebella compared to controls. These include proteins involved in glucose metabolism, detoxification/oxidative stress and Alzheimer disease-related proteins. Furthermore, members of the fatty acid binding protein family, including FABP3, FABP5 and FABP7, were found to have altered expression in the Npc1 mutant cerebellum relative to control. Translating our findings from the murine model to patients, we confirm altered expression of glutathione s-transferase α, superoxide dismutase, and FABP3 in cerebrospinal fluid of NPC1 patients relative to pediatric controls. A subset of NPC1 patients on miglustat, a glycosphingolipid synthesis inhibitor, showed significantly decreased levels of FABP3 compared to patients not on miglustat therapy. This study provides an initial report of dysregulated proteins in NPC1 which will assist with further investigation of NPC1 pathology and facilitate implementation of therapeutic trials.
Journal Article
Interleukin-36–Receptor Antagonist Deficiency and Generalized Pustular Psoriasis
by
Sahbatou, Mourad
,
Mansour, Sourour
,
Towne, Jennifer E
in
Amino acid substitution
,
Autosomal recessive inheritance
,
Biological and medical sciences
2011
A study of families from southern Tunisia affected by general pustular psoriasis uncovered the genetic cause of their disease: a mutation affecting the function of the interleukin-36–receptor antagonist.
Psoriasis is a chronic inflammatory skin disease affecting 2 to 3% of persons of European descent.
1
Psoriasis vulgaris, the most common form of the disease, accounts for 80% of cases and has a strong, albeit complex, genetic component.
2
Numerous chromosomal loci have been implicated in genomewide association studies, but analyses of these loci have yielded only a few candidate genes, which mediate inflammatory cytokine signaling and adaptive immune responses.
3
–
5
The disease follows mendelian transmission in a small minority of families.
Generalized pustular psoriasis is a life-threatening, multisystemic inflammatory disease involving repeated flare-ups of sudden onset, which are characterized by . . .
Journal Article
Impact of TET2 mutations on response rate to azacitidine in myelodysplastic syndromes and low blast count acute myeloid leukemias
by
Mansat-De Mas, V
,
Fontenay, M
,
Raynaud, S
in
631/208/737
,
692/699/67/1059/99
,
692/699/67/1990/1673
2011
The impact of
ten-eleven-translocation 2 (TET2)
mutations on response to azacitidine (AZA) in MDS has not been reported. We sequenced the
TET2
gene in 86 MDS and acute myeloid leukemia (AML) with 20–30% blasts treated by AZA, that is disease categories wherein this drug is approved by Food and Drug Administration (FDA). Thirteen patients (15%) carried
TET2
mutations. Patients with mutated and wild-type (WT)
TET2
had mostly comparable pretreatment characteristics, except for lower hemoglobin, better cytogenetic risk and longer MDS duration before AZA in
TET2
mutated patients (
P
=0.03,
P
=0.047 and
P
=0.048, respectively). The response rate (including hematological improvement) was 82% in MUT versus 45% in WT patients (
P
=0.007). Mutated
TET2
(
P
=0.04) and favorable cytogenetic risk (intermediate risk:
P
=0.04, poor risk:
P
=0.048 compared with good risk) independently predicted a higher response rate. Response duration and overall survival were, however, comparable in the MUT and WT groups. In higher risk MDS and AML with low blast count,
TET2
status may be a genetic predictor of response to AZA, independently of karyotype.
Journal Article
Impact of TP53 mutation variant allele frequency on phenotype and outcomes in myelodysplastic syndromes
2016
Although next-generation sequencing has allowed for the detection of somatic mutations in myelodysplastic syndromes (MDS), the clinical relevance of variant allele frequency (VAF) for the majority of mutations is unknown. We profiled
TP53
and 20 additional genes in our training set of 219 patients with MDS or secondary acute myeloid leukemia with findings confirmed in a validation cohort. When parsed by VAF,
TP53
VAF predicted for complex cytogenetics in both the training (
P
=0.001) and validation set (
P
<0.0001). MDS patients with a
TP53
VAF > 40% had a median overall survival (OS) of 124 days versus an OS that was not reached in patients with VAF <20% (hazard ratio (HR), 3.52;
P
=0.01) with validation in an independent cohort (HR, 4.94,
P
=0.01).
TP53
VAF further stratified distinct prognostic groups independent of clinical prognostic scoring systems (
P
=0.0005). In multivariate analysis, only a
TP53
VAF >40% was an independent covariate (HR, 1.61;
P
<0.0001). In addition,
SRSF2
VAF predicted for monocytosis (
P
=0.003),
RUNX1
VAF with thrombocytopenia (
P
=0.01) and
SF3B1
with ringed sideroblasts (
P
=0.001). Together, our study indicates that VAF should be incorporated in patient management and risk stratification in MDS.
Journal Article
Efficacy and safety of luspatercept versus epoetin alfa in erythropoiesis-stimulating agent-naive, transfusion-dependent, lower-risk myelodysplastic syndromes (COMMANDS): interim analysis of a phase 3, open-label, randomised controlled trial
by
Prebet, Thomas
,
Jonasova, Anna
,
Zeidan, Amer M
in
Acute myeloid leukemia
,
Adverse events
,
Anemia
2023
Erythropoiesis-stimulating agents (ESAs) are the standard-of-care treatment for anaemia in most patients with lower-risk myelodysplastic syndromes but responses are limited and transient. Luspatercept promotes late-stage erythroid maturation and has shown durable clinical efficacy in patients with lower-risk myelodysplastic syndromes. In this study, we report the results of a prespecified interim analysis of luspatercept versus epoetin alfa for the treatment of anaemia due to lower-risk myelodysplastic syndromes in the phase 3 COMMANDS trial.
The phase 3, open-label, randomised controlled COMMANDS trial is being conducted at 142 sites in 26 countries. Eligible patients were aged 18 years or older, had a diagnosis of myelodysplastic syndromes of very low risk, low risk, or intermediate risk (per the Revised International Prognostic Scoring System), were ESA-naive, and required red blood cell transfusions (2–6 packed red blood cell units per 8 weeks for ≥8 weeks immediately before randomisation). Integrated response technology was used to randomly assign patients (1:1, block size 4) to luspatercept or epoetin alfa, stratified by baseline red blood cell transfusion burden (<4 units per 8 weeks vs ≥4 units per 8 weeks), endogenous serum erythropoietin concentration (≤200 U/L vs >200 to <500 U/L), and ring sideroblast status (positive vs negative). Luspatercept was administered subcutaneously once every 3 weeks starting at 1·0 mg/kg body weight with possible titration up to 1·75 mg/kg. Epoetin alfa was administered subcutaneously once a week starting at 450 IU/kg body weight with possible titration up to 1050 IU/kg (maximum permitted total dose of 80 000 IU). The primary endpoint was red blood cell transfusion independence for at least 12 weeks with a concurrent mean haemoglobin increase of at least 1·5 g/dL (weeks 1–24), assessed in the intention-to-treat population. Safety was assessed in patients who received at least one dose of study treatment. The COMMANDS trial was registered with ClinicalTrials.gov, NCT03682536 (active, not recruiting).
Between Jan 2, 2019 and Aug 31, 2022, 356 patients were randomly assigned to receive luspatercept (178 patients) or epoetin alfa (178 patients), comprising 198 (56%) men and 158 (44%) women (median age 74 years [IQR 69–80]). The interim efficacy analysis was done for 301 patients (147 in the luspatercept group and 154 in the epoetin alfa group) who completed 24 weeks of treatment or discontinued earlier. 86 (59%) of 147 patients in the luspatercept group and 48 (31%) of 154 patients in the epoetin alfa group reached the primary endpoint (common risk difference on response rate 26·6; 95% CI 15·8–37·4; p<0·0001). Median treatment exposure was longer for patients receiving luspatercept (42 weeks [IQR 20–73]) versus epoetin alfa (27 weeks [19–55]). The most frequently reported grade 3 or 4 treatment-emergent adverse events with luspatercept (≥3% patients) were hypertension, anaemia, dyspnoea, neutropenia, thrombocytopenia, pneumonia, COVID-19, myelodysplastic syndromes, and syncope; and with epoetin alfa were anaemia, pneumonia, neutropenia, hypertension, iron overload, COVID-19 pneumonia, and myelodysplastic syndromes. The most common suspected treatment-related adverse events in the luspatercept group (≥3% patients, with the most common event occurring in 5% patients) were fatigue, asthenia, nausea, dyspnoea, hypertension, and headache; and none (≥3% patients) in the epoetin alfa group. One death after diagnosis of acute myeloid leukaemia was considered to be related to luspatercept treatment (44 days on treatment).
In this interim analysis, luspatercept improved the rate at which red blood cell transfusion independence and increased haemoglobin were achieved compared with epoetin alfa in ESA-naive patients with lower-risk myelodysplastic syndromes. Long-term follow-up and additional data will be needed to confirm these results and further refine findings in other subgroups of patients with lower-risk myelodysplastic syndromes, including non-mutated SF3B1 or ring sideroblast-negative subgroups.
Celgene and Acceleron Pharma.
Journal Article
Modeling Niemann-Pick disease type C1 in zebrafish: a robust platform for in vivo screening of candidate therapeutic compounds
by
Tsai-Morris, Chon-Hwa
,
Porter, Forbes D.
,
Burgess, Shawn M.
in
2-Hydroxypropyl-beta-cyclodextrin - pharmacology
,
Adults
,
Alleles
2018
Niemann-Pick disease type C1 (NPC1) is a rare autosomal recessive lysosomal storage disease primarily caused by mutations in NPC1. NPC1 is characterized by abnormal accumulation of unesterified cholesterol and glycolipids in late endosomes and lysosomes. Common signs include neonatal jaundice, hepatosplenomegaly, cerebellar ataxia, seizures and cognitive decline. Both mouse and feline models of NPC1 mimic the disease progression in humans and have been used in preclinical studies of 2-hydroxypropyl-β-cyclodextrin (2HPβCD; VTS-270), a drug that appeared to slow neurological progression in a Phase 1/2 clinical trial. However, there remains a need to identify additional therapeutic agents. High-throughput drug screens have been useful in identifying potential therapeutic compounds; however, current preclinical testing is time and labor intensive. Thus, development of a high-capacity in vivo platform suitable for screening candidate drugs/compounds would be valuable for compound optimization and prioritizing subsequent in vivo testing. Here, we generated and characterize two zebrafish npc1-null mutants using CRISPR/Cas9-mediated gene targeting. The npc1 mutants model both the early liver and later neurological disease phenotypes of NPC1. LysoTracker staining of npc1 mutant larvae was notable for intense staining of lateral line neuromasts, thus providing a robust in vivo screen for lysosomal storage. As a proof of principle, we were able to show that treatment of the npc1 mutant larvae with 2HPβCD significantly reduced neuromast LysoTracker staining. These data demonstrate the potential value of using this zebrafish NPC1 model for efficient and rapid in vivo optimization and screening of potential therapeutic compounds. This article has an associated First Person interview with the first author of the paper.
Journal Article