Catalogue Search | MBRL
Search Results Heading
Explore the vast range of titles available.
MBRLSearchResults
-
DisciplineDiscipline
-
Is Peer ReviewedIs Peer Reviewed
-
Item TypeItem Type
-
SubjectSubject
-
YearFrom:-To:
-
More FiltersMore FiltersSourceLanguage
Done
Filters
Reset
52
result(s) for
"Damoulas, Theodoros"
Sort by:
Shifts in Arctic vegetation and associated feedbacks under climate change
2013
This study shows that climate change could lead to a major redistribution of vegetation across the Arctic, with important implications for biosphere–atmosphere interactions, as well as for biodiversity conservation and ecosystem services. Woody vegetation is predicted to expand substantially over coming decades, causing more Arctic warming through positive climate feedbacks than previously thought.
Climate warming has led to changes in the composition, density and distribution of Arctic vegetation in recent decades
1
,
2
,
3
,
4
. These changes cause multiple opposing feedbacks between the biosphere and atmosphere
5
,
6
,
7
,
8
,
9
, the relative magnitudes of which will have globally significant consequences but are unknown at a pan-Arctic scale
10
. The precise nature of Arctic vegetation change under future warming will strongly influence climate feedbacks, yet Earth system modelling studies have so far assumed arbitrary increases in shrubs (for example, +20%; refs
6
,
11
), highlighting the need for predictions of future vegetation distribution shifts. Here we show, using climate scenarios for the 2050s and models that utilize statistical associations between vegetation and climate, the potential for extremely widespread redistribution of vegetation across the Arctic. We predict that at least half of vegetated areas will shift to a different physiognomic class, and woody cover will increase by as much as 52%. By incorporating observed relationships between vegetation and albedo, evapotranspiration and biomass, we show that vegetation distribution shifts will result in an overall positive feedback to climate that is likely to cause greater warming than has previously been predicted. Such extensive changes to Arctic vegetation will have implications for climate, wildlife and ecosystem services.
Journal Article
Crowdsourcing Meets Ecology: Hemispherewide Spatiotemporal Species Distribution Models
by
Hochachka, Wesley M.
,
Bruns, Nicholas E.
,
Damoulas, Theodoros
in
Animals
,
Artificial intelligence
,
Biodiversity
2014
Ecological systems are inherently complex. The processes that affect the distributions of animals and plants operate at multiple spatial and temporal scales, presenting a unique challenge for the development and coordination of effective conservation strategies, particularly for wide‐ranging species. In order to study ecological systems across scales, data must be collected at fine resolutions across broad spatial and temporal extents. Crowdsourcing has emerged as an efficient way to gather these data by engaging large numbers of people to record observations. However, data gathered by crowdsourced projects are often biased due to the opportunistic approach of data collection. In this article, we propose a general class of models called AdaSTEM (for adaptive spatiotemporal exploratory models) that are designed to meet these challenges by adapting to multiple scales while exploiting variation in data density common with crowdsourced data. To illustrate the use of AdaSTEM, we produce intraseasonal distribution estimates of long‐distance migrations across the Western Hemisphere using data from eBird, a citizen science project that utilizes volunteers to collect observations of birds. Subsequently, model diagnostics are used to quantify and visualize the scale and quality of distribution estimates. This analysis shows how AdaSTEM can automatically adapt to complex spatiotemporal processes across a range of scales, thus providing essential information for full‐life cycle conservation planning of broadly distributed species, communities, and ecosystems.
Journal Article
Nonasymptotic Estimates for Stochastic Gradient Langevin Dynamics Under Local Conditions in Nonconvex Optimization
by
Zhang, Ying
,
Akyildiz, Ömer Deniz
,
Sabanis, Sotirios
in
Algorithms
,
Applied mathematics
,
Asymptotic properties
2023
In this paper, we are concerned with a non-asymptotic analysis of sampling algorithms used in nonconvex optimization. In particular, we obtain non-asymptotic estimates in Wasserstein-1 and Wasserstein-2 distances for a popular class of algorithms called Stochastic Gradient Langevin Dynamics (SGLD). In addition, the aforementioned Wasserstein-2 convergence result can be applied to establish a non-asymptotic error bound for the expected excess risk. Crucially, these results are obtained under a local Lipschitz condition and a local dissipativity condition where we remove the uniform dependence in the data stream. We illustrate the importance of this relaxation by presenting examples from variational inference and from index tracking optimization.
Journal Article
Protein interaction sentence detection using multiple semantic kernels
by
Polajnar, Tamara
,
Damoulas, Theodoros
,
Girolami, Mark
in
Algorithms
,
Bioinformatics
,
Classification
2011
Background
Detection of sentences that describe protein-protein interactions (PPIs) in biomedical publications is a challenging and unresolved pattern recognition problem. Many state-of-the-art approaches for this task employ kernel classification methods, in particular support vector machines (SVMs). In this work we propose a novel data integration approach that utilises semantic kernels and a kernel classification method that is a probabilistic analogue to SVMs. Semantic kernels are created from statistical information gathered from large amounts of unlabelled text using lexical semantic models. Several semantic kernels are then fused into an overall composite classification space. In this initial study, we use simple features in order to examine whether the use of combinations of kernels constructed using word-based semantic models can improve PPI sentence detection.
Results
We show that combinations of semantic kernels lead to statistically significant improvements in recognition rates and receiver operating characteristic (ROC) scores over the plain Gaussian kernel, when applied to a well-known labelled collection of abstracts. The proposed kernel composition method also allows us to automatically infer the most discriminative kernels.
Conclusions
The results from this paper indicate that using semantic information from unlabelled text, and combinations of such information, can be valuable for classification of short texts such as PPI sentences. This study, however, is only a first step in evaluation of semantic kernels and probabilistic multiple kernel learning in the context of PPI detection. The method described herein is modular, and can be applied with a variety of feature types, kernels, and semantic models, in order to facilitate full extraction of interacting proteins.
Journal Article
eBird: A Human / Computer Learning Network to Improve Biodiversity Conservation and Research
2013
eBird is a citizen‐science project that takes advantage of the human observational capacity to identify birds to species, and uses these observations to accurately represent patterns of bird occurrences across broad spatial and temporal extents. eBird employs artificial intelligence techniques such as machine learning to improve data quality by taking advantage of the synergies between human computation and mechanical computation. We call this a human/computer learning network, whose core is an active learning feedback loop between humans and machines that dramatically improves the quality of both and thereby continually improves the effectiveness of the net‐ work as a whole. In this article we explore how human/computer learning networks can leverage the contributions of human observers and process their contributed data with artificial intelligence algorithms leading to a computational power that far exceeds the sum of the individual parts.
Journal Article
Crowdsourcing Meets Ecology: Hemisphere-wide Spatiotemporal Species Distribution Models
by
Bruns, Nicholas E
,
Gomes, Carla P
,
Damoulas, Theodoros
in
Bias
,
Crowdsourcing
,
Data collection
2014
Ecological systems are inherently complex. The processes that affect the distributions of animals and plants operate at multiple spatial and temporal scales, presenting a unique challenge for the development and coordination of effective conservation strategies, particularly for wide-ranging species. To study ecological systems across scales, data must be collected at fine resolutions across broad spatial and temporal extents. Crowdsourcing has emerged as an efficient way to gather these data by engaging large numbers of people to record observations. However, data gathered by crowdsourced projects are often biased due to the opportunistic approach of data collection. In this article, the authors have propose a general class of models called AdaSTEM that are designed to meet these challenges by adapting to multiple scales while exploiting variation in data density common with crowdsourced data. This analysis shows how AdaSTEM can automatically adapt to complex spatiotemporal processes across a range of scales, thus providing an essential information for full-life cycle conservation planning of broadly distributed species, communities, and ecosystems. Adapted from the source document.
Journal Article
Table inference for combinatorial origin-destination choices in agent-based population synthesis
by
Damoulas, Theodoros
,
Girolami, Mark
,
Zachos, Ioannis
in
Combinatorial analysis
,
Inference
,
Reconstruction
2023
A key challenge in agent-based mobility simulations is the synthesis of individual agent socioeconomic profiles. Such profiles include locations of agent activities, which dictate the quality of the simulated travel patterns. These locations are typically represented in origin-destination matrices that are sampled using coarse travel surveys. This is because fine-grained trip profiles are scarce and fragmented due to privacy and cost reasons. The discrepancy between data and sampling resolutions renders agent traits non-identifiable due to the combinatorial space of data-consistent individual attributes. This problem is pertinent to any agent-based inference setting where the latent state is discrete. Existing approaches have used continuous relaxations of the underlying location assignments and subsequent ad-hoc discretisation thereof. We propose a framework to efficiently navigate this space offering improved reconstruction and coverage as well as linear-time sampling of the ground truth origin-destination table. This allows us to avoid factorially growing rejection rates and poor summary statistic consistency inherent in discrete choice modelling. We achieve this by introducing joint sampling schemes for the continuous intensity and discrete table of agent trips, as well as Markov bases that can efficiently traverse this combinatorial space subject to summary statistic constraints. Our framework's benefits are demonstrated in multiple controlled experiments and a large-scale application to agent work trip reconstruction in Cambridge, UK.
Robust Bayesian Inference for Berkson and Classical Measurement Error Models
2024
Measurement error occurs when a covariate influencing a response variable is corrupted by noise. This can lead to misleading inference outcomes, particularly in problems where accurately estimating the relationship between covariates and response variables is crucial, such as causal effect estimation. Existing methods for dealing with measurement error often rely on strong assumptions such as knowledge of the error distribution or its variance and availability of replicated measurements of the covariates. We propose a Bayesian Nonparametric Learning framework that is robust to mismeasured covariates, does not require the preceding assumptions, and can incorporate prior beliefs about the error distribution. This approach gives rise to a general framework that is suitable for both Classical and Berkson error models via the appropriate specification of the prior centering measure of a Dirichlet Process (DP). Moreover, it offers flexibility in the choice of loss function depending on the type of regression model. We provide bounds on the generalization error based on the Maximum Mean Discrepancy (MMD) loss which allows for generalization to non-Gaussian distributed errors and nonlinear covariate-response relationships. We showcase the effectiveness of the proposed framework versus prior art in real-world problems containing either Berkson or Classical measurement errors.
Reports on the 2015 AAAI Workshop Series
by
Thiebaux, Sylvie
,
Wang, Can
,
Buckeridge, David L.
in
Activities of daily living
,
Adaptive technology
,
Algorithm
2015
AAAI's 2015 Workshop Program was held Sunday and Monday, January 25–26, 2015, at the Hyatt Regency Austin Hotel in Austin, Texas, USA. The AAAI‐15 workshop program included 16 workshops covering a wide range of topics in artificial intelligence. Most workshops were held on a single day. The titles of the workshops included Algorithm Configuration; Artificial Intelligence and Ethics; Artificial Intelligence Applied to Assistive Technologies and Smart Environments; Artificial Intelligence for Cities; Artificial Intelligence for Transportation: Advice, Interactivity, and Actor Modeling; Beyond the Turing Test; Computational Sustainability; Computer Poker and Imperfect Information; Incentive and Trust in E‐Communities; Knowledge, Skill, and Behavior Transfer in Autonomous Robots; Learning for General Competency in Video Games; Multiagent Interaction without Prior Coordination; Planning, Search, and Optimization; Scholarly Big Data: AI Perspectives, Challenges, and Ideas; Trajectory‐Based Behaviour Analytics; and World Wide Web and Public Health Intelligence.
Journal Article