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result(s) for
"Day, NJ"
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Community-level flammability declines over 25 years of plant invasion in grasslands
by
Pieper, R
,
Curran, Timothy
,
Padullés Cubino, J
in
Biological invasions
,
Biomass
,
botanical composition
2018
1. Exotic plant invasions can alter fire regimes in plant communities. Invaders often possess traits that differ from native plants in the community, resulting in increases or declines in community-level flammability, changing fire regimes and potentially causing long-term modifications to plant community composition. Although considering traits of multiple invaders and native species together is useful to better understand how invasions change community-level flammability, few studies have done this. 2. We measured morphological and flammability traits of 51 native and exotic plant species common in tussock grasslands in New Zealand's south-eastern South Island to examine relationships between morphology and whole-plant and shoot-level flammability. Plant community data from 103 permanent transects in this region measured over a 25-year period (c. 1982-2007) were used to determine how flammability changed with increasing levels of plant invasion. 3. Invasion by exotic plants has led to reduced community-level flammability due to shifts from native tussock grasses with high flammability and high fuel loads to mat-forming exotic forbs with low flammability and little fuel. These changes will likely lead to considerable alterations to the fire regime, resulting in lower intensity fires that burn more patchily and for shorter amounts of time, potentially causing further changes in floristic composition. We found considerable differences in flammability across the wide range of species and growth forms that we studied, emphasising the importance of quantifying species-level flammability and the need to avoid treating grasslands as homogenous in terms of their flammability. Total biomass, leaf length and leaf area were the traits most positively correlated with flammability in these tussock grasslands. 4. Synthesis. We show how plant invasions over decadal time-scales have reduced the community-level flammability of tussock grasslands and, for the first time, demonstrate how this can be driven by exotic forbs. The total biomass of constituent species is a useful surrogate for community flammability across a wide range of species and growth forms in both temperate grasslands and savanna ecosystems and should be used in dynamic global vegetation models to assess how flammability varies under various global change scenarios.
Journal Article
Artemisinin Resistance in Plasmodium falciparum Malaria
by
Yi, Poravuth
,
Singhasivanon, Pratap
,
Day, Nicholas P.J
in
Administration, Oral
,
Adolescent
,
Adult
2009
Artemisinin therapy is a first-line approach to malaria treatment in many parts of the world. Resistance to this class of agents is an emerging threat to malaria treatment and control. In two studies conducted in Thailand and Cambodia,
P. falciparum
was found to have reduced in vivo susceptibility to artesunate, characterized by slow parasite clearance.
In two studies conducted in Thailand and Cambodia,
P. falciparum
was found to have reduced in vivo susceptibility to artesunate, characterized by slow parasite clearance.
Artemisinins are established antimalarial agents with an excellent safety profile.
1
Artemisinin-based combination therapies are now recommended by the World Health Organization (WHO) as first-line treatment of uncomplicated falciparum malaria in all areas in which malaria is endemic.
2
Replacing ineffective, failing treatments (chloroquine and sulfadoxine–pyrimethamine) with artemisinin-based combination therapies has reduced the morbidity and mortality associated with malaria.
3
–
5
Parenteral artesunate is replacing quinine for the treatment of severe malaria.
6
Recently, there have been signs that the efficacy of artemisinin-based combination therapy and artesunate monotherapy have declined in western Cambodia.
7
–
10
Artemisinin resistance would be disastrous for global malaria control. To . . .
Journal Article
Resolving the cause of recurrent Plasmodium vivax malaria probabilistically
2019
Relapses arising from dormant liver-stage
Plasmodium vivax
parasites (hypnozoites) are a major cause of vivax malaria. However, in endemic areas, a recurrent blood-stage infection following treatment can be hypnozoite-derived (relapse), a blood-stage treatment failure (recrudescence), or a newly acquired infection (reinfection). Each of these requires a different prevention strategy, but it was not previously possible to distinguish between them reliably. We show that individual vivax malaria recurrences can be characterised probabilistically by combined modelling of time-to-event and genetic data within a framework incorporating identity-by-descent. Analysis of pooled patient data on 1441 recurrent
P. vivax
infections in 1299 patients on the Thailand–Myanmar border observed over 1000 patient follow-up years shows that, without primaquine radical curative treatment, 3 in 4 patients relapse. In contrast, after supervised high-dose primaquine only 1 in 40 relapse. In this region of frequent relapsing
P. vivax
, failure rates after supervised high-dose primaquine are significantly lower (∼3%) than estimated previously.
Relapse, reinfection and recrudescence can all cause recurrent infection after treatment of
Plasmodium vivax
malaria in endemic areas, but are difficult to distinguish. Here the authors show that they can be differentiated probabilistically and thereby demonstrate the high efficacy of primaquine treatment in preventing relapse.
Journal Article
GWAS of epigenetic aging rates in blood reveals a critical role for TERT
2018
DNA methylation age is an accurate biomarker of chronological age and predicts lifespan, but its underlying molecular mechanisms are unknown. In this genome-wide association study of 9907 individuals, we find gene variants mapping to five loci associated with intrinsic epigenetic age acceleration (IEAA) and gene variants in three loci associated with extrinsic epigenetic age acceleration (EEAA). Mendelian randomization analysis suggests causal influences of menarche and menopause on IEAA and lipoproteins on IEAA and EEAA. Variants associated with longer leukocyte telomere length (LTL) in the telomerase reverse transcriptase gene (
TERT
) paradoxically confer higher IEAA (
P
< 2.7 × 10
−11
). Causal modeling indicates
TERT
-specific and independent effects on LTL and IEAA. Experimental hTERT-expression in primary human fibroblasts engenders a linear increase in DNA methylation age with cell population doubling number. Together, these findings indicate a critical role for hTERT in regulating the epigenetic clock, in addition to its established role of compensating for cell replication-dependent telomere shortening.
Epigenetic clocks based on DNA methylation levels are estimators of chronological age. Here, the authors perform a GWAS of epigenetic aging rates in blood and find SNP variants in the
TERT
locus associated with increased intrinsic epigenetic age are also associated with longer telomeres.
Journal Article
A Controlled Trial of Mass Drug Administration to Interrupt Transmission of Multidrug-Resistant Falciparum Malaria in Cambodian Villages
2018
In Cambodian villages, 3-month mass drug administration with high coverage using dihydroartemisinin-piperaquine was safe and was followed by the absence of clinical Plasmodium falciparum cases for at least 1 year, despite the presence of multidrug-resistant parasites.
Abstract
Background
The increase in multidrug-resistant Plasmodium falciparum in Southeast Asia suggests a need for acceleration of malaria elimination. We evaluated the effectiveness and safety of mass drug administration (MDA) to interrupt malaria transmission.
Methods
Four malaria-endemic villages in western Cambodia were randomized to 3 rounds of MDA (a 3-day course of dihydroartemisinin with piperaquine-phosphate), administered either early in or at the end of the study period. Comprehensive malaria treatment records were collected during 2014-2017. Subclinical parasite prevalence was estimated by ultrasensitive quantitative polymerase chain reaction quarterly over 12 months.
Results
MDA coverage with at least 1 complete round was 88% (1999/2268), ≥2 rounds 73% (1645/2268), and all 3 rounds 58% (1310/2268). Plasmodium falciparum incidence in intervention and control villages was similar over the 12 months prior to the study: 39 per 1000 person-years (PY) vs 45 per 1000 PY (P = .50). The primary outcome, P. falciparum incidence in the 12 months after MDA, was lower in intervention villages (1.5/1000 PY vs 37.1/1000 PY; incidence rate ratio, 24.5 [95% confidence interval], 3.4-177; P = .002). Following MDA in 2016, there were no clinical falciparum malaria cases over 12 months (0/2044 PY) in all 4 villages. Plasmodium vivax prevalence decreased markedly in intervention villages following MDA but returned to approximately half the baseline prevalence by 12 months. No severe adverse events were attributed to treatment.
Conclusions
Mass drug administrations achieved high coverage, were safe, and associated with the absence of clinical P. falciparum cases for at least 1 year.
Clinical Trials Registration
NCT01872702.
Journal Article
Safety and pharmacokinetic properties of a new formulation of parenteral artesunate in healthy Thai volunteers
by
White, Nicholas J.
,
Hoglund, Richard M.
,
Pukrittayakamee, Sasithon
in
Administration, Intravenous
,
Adolescent
,
Adult
2024
Background
Parenteral artesunate is the first-line therapy for severe malaria. Artesunate, in its current formulation, must be prepared immediately before administration by first dissolving in sodium bicarbonate solution and then diluting in saline. A novel solvent for rapid and stable single step reconstitution of artesunate was recently developed showing improved solubility and stability. This study aimed to compare the safety and pharmacokinetic properties of the currently available and newly developed parenteral formulation of artesunate in healthy Thai volunteers.
Methods
This was an open-label, randomized, 4 periods, 4-treatments, 24-sequence, single-dose, cross-over study in 72 male and female healthy Thai volunteers. Frequent pharmacokinetic samples were collected in all volunteers at each dose occasion. Observed concentration–time profiles were analysed with a non-compartmental approach followed by a bioequivalence evaluation.
Results
Both intramuscular and intravenous administrations of the new parenteral formulation of artesunate were safe and well-tolerated, with no additional safety signals compared to the currently used formulation. The pharmacokinetic properties of artesunate and its active metabolite, dihydroartemisinin, were well-characterized, and showed rapid conversion of artesunate into dihydroartemisinin. Intramuscular administration of the newly formulated artesunate resulted in almost complete bioavailability of dihydroartemisinin. The pharmacokinetic properties were similar between the old and new formulation.
Conclusions
The new and more easily prepared formulation of artesunate was safe and well-tolerated, with similar pharmacokinetic properties compared to the currently used formulation. Dihydroartemisinin, the active metabolite responsible for the majority of the anti-malarial effect, showed equivalent exposure after both intravenous and intramuscular administration of artesunate, suggesting that both routes of administration should generate comparable therapeutic effects.
Trial registration
: The study was registered to clinicaltrials.gov (#TCTR20170907002).
Journal Article
Genomic analysis of male puberty timing highlights shared genetic basis with hair colour and lifespan
by
Busch, Alexander S.
,
Easton, Doug F.
,
Timpson, Nicholas J.
in
45/43
,
631/208/205/2138
,
631/443/494
2020
The timing of puberty is highly variable and is associated with long-term health outcomes. To date, understanding of the genetic control of puberty timing is based largely on studies in women. Here, we report a multi-trait genome-wide association study for male puberty timing with an effective sample size of 205,354 men. We find moderately strong genomic correlation in puberty timing between sexes (rg = 0.68) and identify 76 independent signals for male puberty timing. Implicated mechanisms include an unexpected link between puberty timing and natural hair colour, possibly reflecting common effects of pituitary hormones on puberty and pigmentation. Earlier male puberty timing is genetically correlated with several adverse health outcomes and Mendelian randomization analyses show a genetic association between male puberty timing and shorter lifespan. These findings highlight the relationships between puberty timing and health outcomes, and demonstrate the value of genetic studies of puberty timing in both sexes.
Age at voice-breaking is used to determine puberty timing in men, recall of which is considered less accurate than age at first menarche in women. Here, the authors perform multi-trait GWAS for male puberty timing by including both age at voice breaking and age of first facial hair for improved phenotype definition and power.
Journal Article
Efficacy of Primaquine in Preventing Short- and Long-Latency Plasmodium vivax Relapses in Nepal
by
Imwong, Mallika
,
Rijal, Komal Raj
,
White, Nicholas J.
in
Adolescent
,
Adult
,
Antimalarials - pharmacology
2019
Plasmodium vivax is the main cause of malaria in Nepal. Relapse patterns have not been characterized previously.
Patients with P. vivax malaria were randomized to receive chloroquine (CQ; 25 mg base/kg given over 3 days) alone or together with primaquine (PQ; 0.25 mg base/kg/day for 14 days) and followed intensively for 1 month, then at 1- to 2-month intervals for 1 year. Parasite isolates were genotyped.
One hundred and one (49%) patients received CQ and 105 (51%) received CQ + PQ. In the CQ + PQ arm, there were 3 (4.1%) recurrences in the 73 patients who completed 1 year of follow-up compared with 22 of 78 (28.2%) in the CQ-only arm (risk ratio, 0.146 [95% confidence interval, .046-.467]; P < .0001). Microsatellite genotyping showed relatively high P. vivax genetic diversity (mean heterozygosity, 0.843 [range 0.570-0.989] with low multiplicity of infection (mean, 1.05) reflecting a low transmission preelimination setting. Of the 12 genetically homologous relapses, 5 (42%) occurred in a cluster after 9 months, indicating long latency.
Although there may be emerging CQ resistance, the combination of CQ and the standard-dose 14-day PQ regimen is highly efficacious in providing radical cure of short- and long-latency P. vivax malaria in Nepal.
Journal Article
Host immunity to Plasmodium falciparum and the assessment of emerging artemisinin resistance in a multinational cohort
by
Hien, Tran Tinh
,
Ashley, Elizabeth A.
,
White, Nicholas J.
in
Biological Sciences
,
Disease transmission
,
Genotype & phenotype
2017
Artemisinin-resistant falciparum malaria, defined by a slow-clearance phenotype and the presence of kelch13 mutants, has emerged in the Greater Mekong Subregion. Naturally acquired immunity to malaria clears parasites independent of antimalarial drugs. We hypothesized that between- and within-population variations in host immunity influence parasite clearance after artemisinin treatment and the interpretation of emerging artemisinin resistance. Antibodies specific to 12 Plasmodium falciparum sporozoite and blood-stage antigens were determined in 959 patients (from 11 sites in Southeast Asia) participating in a multinational cohort study assessing parasite clearance half-life (PCt1/2) after artesunate treatment and kelch13 mutations. Linear mixed-effects modeling of pooled individual patient data assessed the association between antibody responses and PCt1/2. P. falciparum antibodies were lowest in areas where the prevalence of kelch13 mutations and slow PCt1/2 were highest [Spearman ρ = −0.90 (95% confidence interval, −0.97, −0.65), and Spearman ρ = −0.94 (95% confidence interval, −0.98, −0.77), respectively]. P. falciparum antibodies were associated with faster PCt1/2 (mean difference in PCt1/2 according to seropositivity, −0.16 to −0.65 h, depending on antigen); antibodies have a greater effect on the clearance of kelch13 mutant compared with wild-type parasites (mean difference in PCt1/2 according to seropositivity, −0.22 to −0.61 h faster in kelch13 mutants compared with wild-type parasites). Naturally acquired immunity accelerates the clearance of artemisinin-resistant parasites in patients with falciparum malaria and may confound the current working definition of artemisinin resistance. Immunity may also play an important role in the emergence and transmission potential of artemisinin-resistant parasites.
Journal Article