Explore the vast range of titles available.

Supramolecular polymers are composed of monomers that self-assemble non-covalently, generating distributions of monodimensional fibres in continuous communication with each other and with the surrounding solution. Fibres, exchanging molecular species, and external environment constitute a sole complex system, which intrinsic dynamics is hard to elucidate. Here we report coarse-grained molecular simulations that allow studying supramolecular polymers at the thermodynamic equilibrium, explicitly showing the complex nature of these systems, which are composed of exquisitely dynamic molecular entities. Detailed studies of molecular exchange provide insights into key factors controlling how assemblies communicate with each other, defining the equilibrium dynamics of the system. Using minimalistic and finer chemically relevant molecular models, we observe that a rich concerted complexity is intrinsic in such self-assembling systems. This offers a new dynamic and probabilistic (rather than structural) picture of supramolecular polymer systems, where the travelling molecular species continuously shape the assemblies that statistically emerge at the equilibrium. The dynamic structure of supramolecular polymers is challenging to determine both in experiments and in simulations. Here the authors use coarse-grained molecular models to provide a comprehensive analysis of the molecular communication in these complex molecular systems.

Aims Data on the decomposition of fine roots are scarce for the Mediterranean basin. This work aims to compare chemical traits, decomposition rate, and temperature sensitivity ( Q 10) for root and leaf litter of 43 Mediterranean species. Methods We carried out a two-years litterbag decomposition experiment using 43 fine roots litter and leaf litter types incubated in laboratory conditions at three different temperatures, i.e. 4 °C, 14 °C, and 24 °C. Litter was characterized for carbon (C), nitrogen (N), lignin and cellulose concentration, C/N, and lignin/N ratios. Results Fine root litter had lower N content but higher lignin concentration, lignin/N, and C/N ratios compared to leaf litter. The decay rate of fine root litter was slower than leaf litter. For both tissues, the decay rate was negatively associated with lignin concentration, lignin/N, and C/N ratios but positively with N concentration. Q 10 was higher for fine root than leaf litter, with a positive correlation with lignin while negative with N concentration. Conclusions Our findings demonstrate a higher Q 10 accompanied by a slower decomposition rate of fine root litter compared to leaf litter in Mediterranean ecosystems. These results must be considered in modeling organic C at the ecosystem scale.

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a newly emerged coronavirus that is responsible for the current pandemic of coronavirus disease 2019 (COVID-19), which has resulted in more than 3.7 million infections and 260,000 deaths as of 6 May 2020 1 , 2 . Vaccine and therapeutic discovery efforts are paramount to curb the pandemic spread of this zoonotic virus. The SARS-CoV-2 spike (S) glycoprotein promotes entry into host cells and is the main target of neutralizing antibodies. Here we describe several monoclonal antibodies that target the S glycoprotein of SARS-CoV-2, which we identified from memory B cells of an individual who was infected with severe acute respiratory syndrome coronavirus (SARS-CoV) in 2003. One antibody (named S309) potently neutralizes SARS-CoV-2 and SARS-CoV pseudoviruses as well as authentic SARS-CoV-2, by engaging the receptor-binding domain of the S glycoprotein. Using cryo-electron microscopy and binding assays, we show that S309 recognizes an epitope containing a glycan that is conserved within the Sarbecovirus subgenus, without competing with receptor attachment. Antibody cocktails that include S309 in combination with other antibodies that we identified further enhanced SARS-CoV-2 neutralization, and may limit the emergence of neutralization-escape mutants. These results pave the way for using S309 and antibody cocktails containing S309 for prophylaxis in individuals at a high risk of exposure or as a post-exposure therapy to limit or treat severe disease. The monoclonal antibody S309, identified from memory B cells of an individual infected with SARS-CoV in 2003, or antibody cocktails that contain this antibody potently neutralize SARS-CoV-2.

The goals of the current research were to assess the immediate impact of invasive wild boar (Sus scrofa L.) in olive orchards of southern Italy. Over a one-year study, in grubbed and ungrubbed areas, we measured the seasonal changes on the fast soil biological and chemical responses at depths of 0–15 cm and 15–40 cm, and several leaf and fruit characteristics. The impact factor, IFG, was used to quantify the effects of wild boar on individual soil parameters. Grubbing induced an increase in the soil moisture at both depths. Soil pH, organic matter, and C/N ratio were higher in grubbed soils at 0–15 cm and lower at 15–40 cm compared to ungrubbed soils. These trends were reflected in the higher microbial community biomass and the inhibition of fungal fraction in grubbed topsoil, while an opposite tendency at 15–40 cm was found. Microbial biomass had the highest IFG in topsoil (94%) and metabolic quotient (85%) at a 15–40 cm depth. Microbial stress condition and C loss were found in grubbed soil at both depths. Furthermore, these soils were also shown to be of lower quality than ungrubbed soils, especially at 0–15 cm (SQI = 0.40 vs. 0.50, respectively). A stronger negative impact of wild boar grubbing was observed in the Autumn/Winter and for fruit polyphenol content.

Improvements in crop management for a more sustainable agriculture are fundamental to reduce environmental impacts of cropland and to mitigate effects on global climate change. In this study three fertilization types – ammonium nitrate (control); mineral fertilizer added with a nitrification inhibitor (3,4-dimethylpyrazole phosphate (DMPP)), and an organo-mineral fertilizer (OM) – were tested on a tomato crop in order to evaluate effects both on crop production and soil N2O emissions. Plants grown under OM fertilization had a greater relative growth rate compared to mineral fertilization, due to a higher net assimilation rate, which was related to a greater light interception rather than to a higher photosynthetic efficiency. OM fertilization determined the highest fruit production and lower soil N2O fluxes compared to NH4NO3, although the lowest soil N2O fluxes were found in response to mineral fertilizer added with a nitrification inhibitor. It can be concluded that organo-mineral fertilizer is a better nutrient source compared to mineral fertilizers able to improve crop yield and to mitigate soil N2O emission.

Here, we report the chemical characterization and identification of the possible sources of particulate matter (fraction PM10) at two different sites in Naples. PM10 concentration and its chemical composition were studied using the crustal enrichment factor (EF) and principal component analysis (PCA). In all of the seasons, the PM10 levels, were significantly higher (p < 0.01) in the urban-traffic site (denominated NA02) than in the urban-background site (denominated NA01). In order to reconstruct the particle mass, the components were classified into seven classes as follows: mineral dust (MD), trace elements (TE), organic matter (OM), elemental carbon (EC), sea salt (SS), secondary inorganic aerosol (SIA) and undetermined parts (unknown (UNK)). According to the chemical mass closure obtained, the major contribution was OM, which was higher (p < 0.01) during summer than in other seasons. In both sites, a good correlation (R2 > 0.8) was obtained between reconstructed mass and gravimetric mass. PCA analysis explained 76% and 79% of the variance in NA01 and NA02, respectively. The emission sources were the same for both sites; but, the location of the site, the different distances from the sources and the presence and absence of vegetation proved the different concentrations and compositions of PM10.

Emerging multidrug-resistant bacteria are a challenge for modern medicine, but how these pathogens are so successful is not fully understood. Robust antibacterial vaccines have prevented and reduced resistance suggesting a pivotal role for immunity in deterring antibiotic resistance. Here, we show the increased prevalence of Klebsiella pneumoniae lipopolysaccharide O2 serotype strains in all major drug resistance groups correlating with a paucity of anti-O2 antibodies in human B cell repertoires. We identify human monoclonal antibodies to O-antigens that are highly protective in mouse models of infection, even against heavily encapsulated strains. These antibodies, including a rare anti-O2 specific antibody, synergistically protect against drug-resistant strains in adjunctive therapy with meropenem, a standard-of-care antibiotic, confirming the importance of immune assistance in antibiotic therapy. These findings support an antibody-based immunotherapeutic strategy even for highly resistant K. pneumoniae infections, and underscore the effect humoral immunity has on evolving drug resistance. Therapeutics to combat multidrug-resistant bacteria such as Klebsiella pneumonia e are needed. Here the authors show immune evasion drives lipopolysaccharide O2 serotype expansion in multidrug-resistant isolates, and anti-O-antigen human monoclonal antibodies synergize with antibiotics to protect mice from infection.

Succession is the gradual change in the composition of a community of organisms over time that causes changes in soil properties. In Mediterranean areas where soils are subjected to erosion, reforestation is often applied, impacting the ecological succession and the soil properties. The main goals of the present research were (i) to evaluate changes in soil abiotic and biotic properties along successional stages and (ii) to verify the impact of reforestation on soil properties of the mature stage. To achieve the aims, the research was performed inside a Mediterranean forest including patches of zones at different successional stages (early: E, intermediate: I and natural‐mature: N‐M) and reforested zones (reforested‐pine: R‐P). The soils were analysed for pH, water content, total nitrogen content and organic matter amount. Additionally, soil microbial and fungal biomasses, hydrolase, dehydrogenase and β‐glucosidase activities, and phytotoxicity were also evaluated. Along the succession, increases in organic matter, nutrient and water content occurred, with the highest values observed at the N‐M stage. Similarly, microbial biomass and activity were from two‐ to threefold higher at the N‐M than at the E stage; by contrast, soil phytotoxicity was twofold higher at the E than at the N‐M stage. Organic matter and water contents were the main factors influencing the soil microbial and fungal biomasses as well as the enzymatic activities. At the R‐P stage, the contents of soil water, organic matter and N decreased, leading to the reduction of the microbial biomass and activities as compared to I and N‐M stages. At the investigated area, reforestation, modifying the soil abiotic properties and decreasing the microbial abundance and activities, interrupted the evolution of the plant community.

During the lipidomic analysis of red blood cell membranes, the distribution and percentage ratios of the fatty acids are measured. Since fatty acids are the key constituents of cell membranes, by evaluating their quantities it possible to understand the general health of the cells and to obtain health indicators of the whole organism. However, because the analysis is precise, it is necessary to ensure that the blood does not undergo significant variations between the point of collection and analysis. The composition of the blood may vary dramatically weeks after collection, hence, here an attempt is made to stabilize these complex matrixes using antioxidants deposited on the paper cards on which the blood itself is deposited.

As they quickly respond to environmental conditions, soil enzymes, involved in nutrient cycles, are considered good indicators of soil quality. The Mediterranean area is a peculiar environment for climatic conditions and for fire frequency. Therefore, the research aimed to evaluate the role of seasonality and fire on enzymatic activities (i.e., hydrolase, dehydrogenase, and β-glucosidase) in soils covered by herbs, black locust, pine, and holm oak. In addition, the main soil abiotic properties that drive the enzymatic activities were also investigated. In order to achieve the aims, surface soils were collected in unburnt and burnt areas and characterized for water and organic matter contents, pH, concentrations of C and N, and available fractions of Al, Ca, Cu, Fe, Mg, Mn, Na, and Pb. The results highlighted that the soil enzymatic activities were mainly affected by seasonality more than by fire; in unburnt soils, their main drivers were nutrient availabilities, whereas, in burnt soils they were pH, water and organic matter contents, C and N concentrations, and both nutrient and metal availabilities. Finally, holm oak, as compared with herbs, pine, and black locust, conferred higher stability to soils that were affected by seasonality and fire.