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"Deng, Kailin"
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Nanoselenium transformation and inhibition of cadmium accumulation by regulating the lignin biosynthetic pathway and plant hormone signal transduction in pepper plants
2021
Selenium (Se) can promote the growth and resistance of agricultural crops as fertilizers, while the role of nano-selenium (nano-Se) against Cd remains unclear in pepper plants (
Capsicum annuum
L.). Biofortification with nano-Se observably restored Cd stress by decreasing the level of Cd in plant tissues and boosting the accumulation in biomass. The Se compounds transformed by nano-Se were primarily in the form of SeMet and MeSeCys in pepper tissues. Differential metabolites and the genes of plant signal transduction and lignin biosynthesis were measured by employing transcriptomics and determining target metabolites. The number of lignin-related genes (
PAL
,
CAD
,
4CL
, and
COMT
) and contents of metabolites (sinapyl alcohol, phenylalanine,
p
-coumaryl alcohol, caffeyl alcohol, and coniferaldehyde) were remarkably enhanced by treatment with Cd1Se0.2, thus, maintaining the integrity of cell walls in the roots. It also enhanced signal transduction by plant hormones and responsive resistance by inducing the biosynthesis of genes (
BZR1
,
LOX3
, and
NCDE1
) and metabolites (brassinolide, abscisic acid, and jasmonic acid) in the roots and leaves. In general, this study can enable a better understanding of the protective mechanism of nano-Se in improving the capacity of plants to resist environmental stress.
Journal Article
Determination of DNA adducts by combining acid-catalyzed hydrolysis and chromatographic analysis of the carcinogen-modified nucleobases
2016
The commonly used method of analyzing carcinogen-induced DNA adducts involves the hydrolysis of carcinogen-modified DNA samples by using a mixture of enzymes, followed by ³²P-postlabeling or liquid chromatography (LC)-based analyses of carcinogen-modified mononucleotides/nucleosides. In the present study, we report the development and application of a new approach to DNA adduct analysis by combining the H⁺/heat-catalyzed release of carcinogen-modified nucleobases and the use of LC-based methods to analyze DNA adducts. Results showed that heating the carcinogen-modified DNA samples at 70 °C for an extended period of 4 to 6 h in the presence of 0.05 % HCl can efficiently induce DNA depurination, releasing the intact carcinogen-modified nucleobases for LC analyses. After optimizing the hydrolysis conditions, DNA samples with C8- and N ² -modified 2′-deoxyguanosine, as well as N ⁶ -modified 2′-deoxyadenosine, were synthesized by reacting DNA with 1-nitropyrene, acetaldehyde, and aristolochic acids, respectively. These samples were then hydrolyzed, and the released nucleobase adducts were analyzed using LC-based analytical methods. Analysis results demonstrated a dose-dependent release of target DNA adducts from carcinogen-modified DNA samples, indicating that the developed H⁺/heat-catalyzed hydrolysis method was quantitative. Comparative studies with enzymatic digestion method on carcinogen-modified DNA samples revealed that the two hydrolysis methods did not yield systematically different results.
Journal Article
Uniconazole Residue and Decline in Wheat and Soil Under Field Application
by
Zhang, Fengzu
,
Deng, Kailin
,
Pan, Canping
in
Agrochemicals products
,
analysis
,
Analysis methods
2013
Uniconazole residue dynamics and final residues in supervised field trials at GAP conditions were studied. The residue levels and dissipation rate of uniconazole was detected by LC–MS. At fortification levels of 0.04, 0.2 and 2 mg kg
−1
, recoveries ranged from 78.7 % to 100.9 % with RSDs of 0.1 %–4.6 % (n = 5). The dissipation experiments showed the half-lives (T
1/2
) of uniconazole in soil and wheat plants were 2.9–3.3 and 3.8–4.4 days, respectively. At pre-harvest intervals (PHI) of 45 and 60 days, uniconazole residue were no detectable or below the limit of quantification (LOQ) in soil, wheat plants and wheat.
Journal Article
Nitrated Polycyclic Aromatic Hydrocarbons in Food: Occurrence and Risk Assessment
2021
Carcinogenic nitrated aromatic hydrocarbons (nitro-PAHs) are a group of nitro-derivatives of polycyclic aromatic hydrocarbons (PAHs), which have aroused increasing attentions due to their wide occurrence and potent toxicity. Though their concentration levels are lower than respective parent PAHs, nitro-PAHs exhibit higher cancer risks to human and are proven to be direct mutagens. Previous studies focused on analyzing nitro-PAHs in atmospheric samples and revealing their formation mechanisms or emission sources. Comparing to the well-documented parent PAHs, studies on nitro-PAHs are at the initial stage and regulations on them are still lacking. My thesis research is directed at developing sensitive and efficient analytical methods to estimate the exposure risks of representative nitro-PAHs via dietary intake. Firstly, I reported a novel ultraperformance liquid chromatography coupled with fluorescence detection (UPLC-FLD) method, which combined pre-column nitro-reduction and fluorescence detection, to analyze nitro-PAHs in meat products. A follow-up work was conducted on rice grains and vegetables, and QuEChERS based sample extraction was applied to determine nitro-PAHs. Dietary exposure risks of nitro-PAHs were evaluated based on the monitoring results and Hong Kong diet. The results suggested that more than 90% of the tested samples were detected with nitro-PAHs and the concentration levels were higher than expected. Moreover, the fate of model nitro-PAH, 1-nitropyrene, was explored on a plant-soil system for the first time and compared with pyrene. The fate study revealed that the more carcinogenic nitro-PAHs might be more stable in the agricultural soil, and were susceptible to plant uptake, particularly in the root part of plant. Ultimately, biomarkers (DNA and protein adduct) associated risk assessment was conducted both in vitro and in Sprague Dawley rats. In contrast to the in vitro result, protein adduct level was more than 100 times higher than that of DNA adduct in vivo, which could be a more valuable biomarker for nitro-PAHs exposure. It is anticipated that the food monitoring study and fate study of nitro-PAHs could contribute to the dietary exposure risk assessment via direct or modeling estimation. Furthermore, we hope the development of biomarkers for 1-nitropyrene could help assess the toxicity of nitro-PAHs and thus facilitate implementing regulations on nitro-PAHs.
Dissertation
Remediation of 1-Nitropyrene in Soil: A Comparative Study with Pyrene
2020
Nitrated polycyclic aromatic hydrocarbons (nPAHs) are ubiquitous environmental pollutants, which exhibits higher toxicity than their corresponding parent PAHs (pPAHs). Recent studies demonstrated that the nPAHs could represent major soil pollution, however the remediation of nPAHs has been rarely reported. In this study, biological, physical, and chemical methods have been applied to remove 1-nitropyrene, the model nPAH, in contaminated soil. A comparative study with pyrene has also been investigated and evaluated. The results suggest that the physical method with activated carbon is an efficient and economical approach, removing 88.1% and 78.0% of 1-nitropyrene and pyrene respectively, within one day. The zero-valent ion has a similar removal performance on 1-nitropyrene (83.1%), converting 1-nitropyrene to 1-aminopyrene in soil via chemical reduction and decreasing the mutagenicity and carcinogenicity of 1-nitropyrene. Biological remediation that employs scallion as a plant model can reduce 55.0% of 1-nitropyrene in soil (from 39.6 to 17.8 μg/kg), while 77.9% of pyrene can be removed by plant. This indicates that nPAHs might be more persistent than corresponding pPAHs in soil. It is anticipated that this study could draw public awareness of nitro-derivatives of pPAHs and provide remediation technologies of carcinogenic nPAHs in soil.
Journal Article
Structure of Mpro from SARS-CoV-2 and discovery of its inhibitors
2020
A new coronavirus, known as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), is the aetiological agent responsible for the 2019–2020 viral pneumonia outbreak of coronavirus disease 2019 (COVID-19)
1
–
4
. Currently, there are no targeted therapeutic agents for the treatment of this disease, and effective treatment options remain very limited. Here we describe the results of a programme that aimed to rapidly discover lead compounds for clinical use, by combining structure-assisted drug design, virtual drug screening and high-throughput screening. This programme focused on identifying drug leads that target main protease (M
pro
) of SARS-CoV-2: M
pro
is a key enzyme of coronaviruses and has a pivotal role in mediating viral replication and transcription, making it an attractive drug target for SARS-CoV-2
5
,
6
. We identified a mechanism-based inhibitor (N3) by computer-aided drug design, and then determined the crystal structure of M
pro
of SARS-CoV-2 in complex with this compound. Through a combination of structure-based virtual and high-throughput screening, we assayed more than 10,000 compounds—including approved drugs, drug candidates in clinical trials and other pharmacologically active compounds—as inhibitors of M
pro
. Six of these compounds inhibited M
pro
, showing half-maximal inhibitory concentration values that ranged from 0.67 to 21.4 μM. One of these compounds (ebselen) also exhibited promising antiviral activity in cell-based assays. Our results demonstrate the efficacy of our screening strategy, which can lead to the rapid discovery of drug leads with clinical potential in response to new infectious diseases for which no specific drugs or vaccines are available.
A programme of structure-assisted drug design and high-throughput screening identifies six compounds that inhibit the main protease of SARS-CoV-2, demonstrating the ability of this strategy to isolate drug leads with clinical potential.
Journal Article
Safety and efficacy of fecal microbiota transplantation for autoimmune diseases and autoinflammatory diseases: A systematic review and meta-analysis
by
Zeng, Liuting
,
Deng, Ying
,
Chen, Junpeng
in
Arthritis
,
Autoimmune diseases
,
Autoimmune Diseases - etiology
2022
To evaluate the safety and efficacy of fecal microbiota transplantation for autoimmune diseases and autoinflammatory diseases.
Relevant literature was retrieved from the PubMed database, Embase database, Cochrane Library database, etc. The search period is from the establishment of the database to January 2022. The outcomes include clinical symptoms, improvement in biochemistry, improvement in intestinal microbiota, improvement in the immune system, and adverse events. Literature screening and data extraction were independently carried out by two researchers according to the inclusion and exclusion criteria, and RevMan 5.3 software was used for statistics and analysis.
Overall, a total of 14 randomized controlled trials (RCTs) involving six types of autoimmune diseases were included. The results showed the following. 1) Type 1 diabetes mellitus (T1DM): compared with the autologous fecal microbiota transplantation (FMT) group (control group), the fasting plasma C peptide in the allogenic FMT group at 12 months was lower. 2) Systemic sclerosis: at week 4, compared with one of two placebo controls, three patients in the experimental group reported a major improvement in fecal incontinence. 3) Ulcerative colitis, pediatric ulcerative colitis, and Crohn's disease: FMT may increase clinical remission, clinical response, and endoscopic remission for patients with ulcerative colitis and increase clinical remission for patients with Crohn's disease. 4) Psoriatic arthritis: there was no difference in the ratio of ACR20 between the two groups.
Based on current evidence, the application of FMT in the treatment of autoimmune diseases is effective and relatively safe, and it is expected to be used as a method to induce remission of active autoimmune diseases.
https://www.crd.york.ac.uk/prospero/display_record.php?ID=CRD42021235055, identifier CRD42021235055.
Journal Article
Enantioselective construction of silicon-stereogenic vinylsilanes from simple alkenes
2025
The diverse utility of acyclic vinylsilanes has driven the interest in the synthesis of enantioenriched vinylsilanes bearing a Si-stereogenic center. However, the predominant approaches for catalytic asymmetric generation of Si-stereogenic vinylsilanes have mainly relied on transition metal-catalyzed reactions of alkynes with different silicon sources. Here we successfully realize the enantioselective synthesis of linear silicon-stereogenic vinylsilanes with good yields and enantiomeric ratios from simple alkenes under rhodium catalysis. The significance of this transformation lies in its ability to achieve regioconvergent and enantioconvergent conversion, efficiently transforming petroleum-derived isomeric mixtures of olefin feedstocks into a single regio- and stereoisomer product. The practicality of this method is further exemplified by the diverse downstream transformations of these enantioenriched silicon-stereogenic vinylsilanes leveraging the olefin functionality and the leaving group nature of the aryl substituent on silicon as well as the development of chiral π-conjugated double bond systems.
The enantioselective synthesis of silicon-stereogenic vinylsilanes from simple alkenes remains underexplored. Here the authors report the enantioselective method from simple alkenes to yield linear silicon-stereogenic vinylsilanes with good yields and enantiomeric ratios under rhodium catalysis.
Journal Article
Safety and efficacy of probiotic supplementation in 8 types of inflammatory arthritis: A systematic review and meta-analysis of 34 randomized controlled trials
by
Zeng, Liuting
,
Deng, Ying
,
Li, Jun
in
Arthritis, Rheumatoid - drug therapy
,
Autoimmune diseases
,
Bone Diseases, Metabolic
2022
To evaluate Safety and efficacy of probiotic supplementation in inflammatory arthritis.
The literature on the treatment of inflammatory arthritis with probiotics has been collected in databases such as CNKI, Pubmed, Cochrane library, Embase, etc. The search time is for them to build the database until May 2022. The included literatures are randomized controlled trials (RCTs) of probiotics in the treatment of hyperuricemia and gout. The Cochrane risk assessment tool was used for quality evaluation, and the Rev Man5.3 software was used for meta-analysis.
A total of 37 records were finally included, involving 34 RCTs and 8 types of autoimmune disease (Hyperuricemia and gout, Inflammatory bowel disease arthritis, juvenile idiopathic arthritis [JIA], Osteoarthritis [OA], Osteoporosis and Osteopenia, Psoriasis, rheumatoid arthritis (RA), Spondyloarthritis). RA involved 10 RCTs (632 participants) whose results showed that probiotic intervention reduced CRP. Psoriasis involved 4 RCTs (214 participants) whose results showed that probiotic intervention could reduce PASI scores. Spondyloarthritis involved 2 RCTs (197 participants) whose results showed that probiotic intervention improved symptoms in patients. Osteoporosis and Ostepenia involving 10 RCTs (1156 participants) showed that probiotic intervention improved bone mineral density in patients. Hyperuricemia and gout involving 4 RCTs (294 participants) showed that probiotic intervention improved serum uric acid in patients. OA involving 1 RCTs (433 participants) showed that probiotic intervention improved symptoms in patients. JIA involving 2 RCTs (72 participants) showed that probiotic intervention improved symptoms in patients. Inflammatory bowel disease arthritis involving 1 RCTs (120 participants) showed that probiotic intervention improved symptoms in patients. All of the above RCTs showed that probiotics did not increase the incidence of adverse events.
Probiotic supplements may improve Hyperuricemia and gout, Inflammatory bowel disease arthritis, JIA, OA, Osteoporosis and Osteopenia, Psoriasis, RA, Spondyloarthritis. However, more randomized controlled trials are needed in the future to determine the efficacy and optimal dosing design of probiotics.
https://www.crd.york.ac.uk/prospero/display_record.php?ID=CRD42021286425, identifier CRD42021286425.
Journal Article