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736 result(s) for "Duncan, Emily"
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Message in a bottle: Open source technology to track the movement of plastic pollution
Rivers worldwide are now acting as major transport pathways for plastic pollution and discharge large quantities of waste into the ocean. Previous oceanographic modelling and current drifter data have been used to predict the movement and accumulation of plastic pollution in the marine environment, but our understanding of the transport and fate through riparian systems is still largely unknown. Here we undertook a proof of concept study by applying open source tracking technology (both GPS (Global Positing System) cellular networks and satellite technology), which have been successfully used in many animal movement studies, to track the movements of individual plastic litter items (500 ml PET (polyethylene terephthalate) drinks bottles) through the Ganges River system (known as the Ganga in India and the Padma and Meghna in Bangladesh, hereafter known as the Ganges) and the Bay of Bengal. Deployed tags were successfully tracked through the Ganges river system and into the Bay of Bengal marine system. The “bottle tags” were designed and built (e.g. shape, size, buoyancy) to replicate true movement patterns of a plastic bottle. The maximum distance tracked to date is 2845 km over a period of 94 days. We discuss lessons learnt from the development of these plastic litter tags, and outline how the potential widespread use of this open source technology has the ability to significantly increase understanding of the location of accumulation areas and the timing of large inputs of plastic pollution into the aquatic system. Furthermore, “bottle tags” may act as a powerful tool for stimulating social behaviour change, informing science-based policy, and as valuable educational outreach tools for public awareness.
A single N6-methyladenosine site regulates lncRNA HOTAIR function in breast cancer cells
N6-methyladenosine (m6A) modification of RNA regulates normal and cancer biology, but knowledge of its function on long noncoding RNAs (lncRNAs) remains limited. Here, we reveal that m6A regulates the breast cancer-associated human lncRNA HOTAIR. Mapping m6A in breast cancer cell lines, we identify multiple m6A sites on HOTAIR, with 1 single consistently methylated site (A783) that is critical for HOTAIR-driven proliferation and invasion of triple-negative breast cancer (TNBC) cells. Methylated A783 interacts with the m6A “reader” YTHDC1, promoting chromatin association of HOTAIR, proliferation and invasion of TNBC cells, and gene repression. A783U mutant HOTAIR induces a unique antitumor gene expression profile and displays loss-of-function and antimorph behaviors by impairing and, in some cases, causing opposite gene expression changes induced by wild-type (WT) HOTAIR. Our work demonstrates how modification of 1 base in an lncRNA can elicit a distinct gene regulation mechanism and drive cancer-associated phenotypes.
Opportunities and Challenges for Big Data in Agricultural and Environmental Analysis
Agriculture stands on the cusp of a digital revolution, and the same technologies that created the Internet and are transforming medicine are now being applied in our farms and on our fields. Overall, this digital agricultural revolution is being driven by the low cost of collecting data on everything from soil conditions to animal health and crop development along with weather station data and data collected by drones and satellites. The promise of these technologies is more food, produced on less land, with fewer inputs and a smaller environmental footprint. At present, however, barriers to realizing this potential include a lack of ability to aggregate and interpret data in such a way that it results in useful decision support tools for farmers and the need to train farmers in how to use new tools. This article reviews the state of the literature on the promise and barriers to realizing the potential for Big Data to revolutionize agriculture.
A Review on Security of Smart Farming and Precision Agriculture: Security Aspects, Attacks, Threats and Countermeasures
In recent years, Smart Farming (SF) and Precision Agriculture (PA) have attracted attention from both the agriculture industry as well as the research community. Altogether, SF and PA aim to help farmers use inputs (such as fertilizers and pesticides) more efficiently through using Internet of Things (IoT) devices, but in doing so, they create new security threats that can defeat this purpose in the absence of adequate awareness and proper countermeasures. A survey on different security-related challenges is required to raise awareness and pave they way for further research in this area. In this paper, we first itemize the security aspects of SF and PA. Next, we review the types of cyber attacks that can violate each of these aspects. Accordingly, we present a taxonomy on cyber-threats to SF and PA on the basis of their relations to different stages of Cyber-Kill Chain (CKC). Among cyber-threats, we choose Advanced Persistent Threats (APTs) for further study. Finally, we studied related risk mitigation strategies and countermeasure, and developed a future road map for further study in this area. This paper’s main contribution is a categorization of security threats within the SF/PA areas and provide a taxonomy of security threats for SF environments so that we may detect the behavior of APT attacks and any other security threat in SF and PA environments.
Nutrient balances influence hydrologic losses of nitrogen and phosphorus across agricultural fields in northwestern Ohio
Excess nitrogen (N) and phosphorus (P) applied to agricultural fields may be transported to adjacent surface waters and exported to downstream systems, leading to environmental issues including algal blooms. Management practices associated with fertilizer application, including the input rate and source (e.g., inorganic vs. organic), influence N and P accumulation within agricultural fields and may ultimately determine N and P loss in surface and subsurface hydrologic pathways. In this study, we used management data provided by individual farmers to quantify annual agronomic N and P balances across 40 monitored agricultural fields in the Western Lake Erie Basin for a total of 150 site years; positive balances indicate nutrient accumulation and negative balances indicate nutrient drawdown or reduction, after accounting for all agronomic inputs and outputs. We examined the effect of application rate and fertilizer source on in-field agronomic N and P balances, as well as determined the relationship between in-field agronomic N and P balances and hydrologic N and P losses. We found that in-field agronomic balances of N and P increased with application rate and varied among fertilizer sources; fields receiving mixed or organic fertilizers had greater N and P agronomic balances compared with inorganic fertilizers. Both hydrologic N and P loss increased with in-field agronomic N and P balances, demonstrating that nutrient accumulation within agricultural fields generally increases nutrient loss. Additional controls on hydrologic N and P losses varied, with hydrologic N loss strongly controlled by total discharge while hydrologic P loss differed among fertilizer sources and indicated legacy P in some fields. These results highlight that both nutrient and water management practices are likely necessary to achieve water quality improvements in downstream lentic and coastal ecosystems.
Is agricultural digitization a reality among smallholder farmers in Africa? Unpacking farmers' lived realities of engagement with digital tools and services in rural Northern Ghana
Background Digital technologies are promoted as transformational for smallholders in Africa through the potential to enhance access to knowledge, increase productivity and food security. Despite the anticipations for agricultural digitalization in Africa, smallholders' engagement with digitalization is empirically underexplored. Hence, we surveyed 1565 rural farmers in Northern Ghana to explore how farmers interact with digital tools and services, and the variations in their engagements. Results We found that despite the growing array of digital opportunities (with diverse tools and services available to farmers), farmers are mainly confined to simple devices (mobile phones, radio, and TV) as access to digital resources, including the internet remains limited. Meanwhile, the main sources of digitalization services for smallholders remain largely the highly subisidized, development-orieted. NGOs and private-sector projects, which generally leverage SMS, Interactive Voice Response (IVR), radio, or field agents to reach farmers. Nonetheless, participation in digitalization services remains limited, unimpressive at best, and often fades over time because of weak building blocks evident in low literacies, lack of digital competencies and the limited access to digital resources. Conclusions Thus, full-scale digitalization remains a distant goal, and transformation claims are disconnected from smallholders' lived realities. However, opportunities exist to create a ‘digitalization for smallholders’ that is sensitive to the current and future structural limitations of smallholder agriculture, including low literacy and limited access to digital tools, to make agriculture digitalization reach its full potential in Africa.
Dietary analysis of two sympatric marine turtle species in the eastern Mediterranean
Dietary studies provide key insights into threats and changes within ecosystems and subsequent impacts on focal species. Diet is particularly challenging to study within marine environments and therefore is often poorly understood. Here, we examined the diet of stranded and bycaught loggerhead (Caretta caretta) and green turtles (Chelonia mydas) in North Cyprus (35.33° N, 33.47° E) between 2011 and 2019. A total of 129 taxa were recorded in the diet of loggerhead turtles (n = 45), which were predominantly carnivorous (on average 72.1% of dietary biomass), foraging on a large variety of invertebrates, macroalgae, seagrasses and bony fish in low frequencies. Despite this opportunistic foraging strategy, one species was particularly dominant, the sponge Chondrosia reniformis (21.5%). Consumption of this sponge decreased with increasing turtle size. A greater degree of herbivory was found in green turtles (n = 40) which predominantly consumed seagrasses and macroalgae (88.8%) with a total of 101 taxa recorded. The most dominant species was a Lessepsian invasive seagrass, Halophila stipulacea (31.1%). This is the highest percentage recorded for this species in green turtle diet in the Mediterranean thus far. With increasing turtle size, the percentage of seagrass consumed increased with a concomitant decrease in macroalgae. Seagrass was consumed year-round. Omnivory occurred in all green turtle size classes but reduced in larger turtles (> 75 cm CCL) suggesting a slow ontogenetic dietary shift. Macroplastic ingestion was more common in green (31.6% of individuals) than loggerhead turtles (5.7%). This study provides the most complete dietary list for marine turtles in the eastern Mediterranean.
Diet-related selectivity of macroplastic ingestion in green turtles (Chelonia mydas) in the eastern Mediterranean
Understanding the drivers of key interactions between marine vertebrates and plastic pollution is now considered a research priority. Sea turtles are primarily visual predators, with the ability to discriminate according to colour and shape; therefore these factors play a role in feeding choices. Classification methodologies of ingested plastic currently do not record these variables, however here, refined protocols allow us to test the hypothesis that plastic is selectively ingested when it resembles the food items of green turtles ( Chelonia mydas ). Turtles in the eastern Mediterranean displayed strong diet-related selectivity towards certain types (sheet and threadlike), colours (black, clear and green) and shapes (linear items strongly preferred) of plastic when compared to the environmental baseline of plastic beach debris. There was a significant negative relationship between size of turtle (curved carapace length) and number/mass of plastic pieces ingested, which may be explained through naivety and/or ontogenetic shifts in diet. Further investigation in other species and sites are needed to more fully ascertain the role of selectivity in plastic ingestion in this marine vertebrate group.
Plastic Pollution and Small Juvenile Marine Turtles: A Potential Evolutionary Trap
The ingestion of plastic by marine turtles is now reported for all species. Small juvenile turtles (including post-hatchling and oceanic juveniles) are thought to be most at risk, due to feeding preferences and overlap with areas of high plastic abundance. Their remote and dispersed life stage, however, results in limited access and assessments. Here, stranded and bycaught specimens from Queensland Australia, Pacific Ocean (PO; n = 65; 1993–2019) and Western Australia, Indian Ocean (IO; n = 56; 2015–2019) provide a unique opportunity to assess the extent of plastic (> 1mm) ingestion in five species [green ( Chelonia mydas ), loggerhead ( Caretta caretta ), hawksbill ( Eretmochelys imbricata ), olive ridley ( Lepidochelys olivacea ), and flatback turtles ( Natator depressus )]. In the Pacific Ocean, high incidence of ingestion occurred in green (83%; n = 36), loggerhead (86%; n = 7), flatback (80%; n = 10) and olive ridley turtles (29%; n = 7). There was an overall lower incidence in IO; highest being in the flatback (28%; n = 18), the loggerhead (21%; n = 14) and green (9%; n = 22). No macroplastic debris ingestion was documented for hawksbill turtles in either site although sample sizes were smaller for this species (PO n = 5; IO n = 2). In the Pacific Ocean, the majority of ingested debris was made up of hard fragments (mean of all species 52%; species averages 46–97%), whereas for the Indian Ocean these were filamentous plastics (52%; 43–77%). The most abundant colour for both sites across all species was clear (PO: 36%; IO: 39%), followed by white for PO (36%) then green and blue for IO (16%; 16%). The polymers most commonly ingested by turtles in both oceans were polyethylene (PE; PO-58%; IO-39%) and polypropylene (PP; PO-20.2%; IO-23.5%). We frame the high occurrence of ingested plastic present in this marine turtle life stage as a potential evolutionary trap as they undertake their development in what are now some of the most polluted areas of the global oceans.