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65 result(s) for "Duncanson, Laura"
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Towards mapping the diversity of canopy structure from space with GEDI
Plant biodiversity supports life on Earth and provides a range of important ecosystem services, but is under severe pressure by global change. Structural diversity plays a crucial role for carbon, water and energy cycles and animal habitats. However, it is very difficult to map and monitor over large areas, limiting our ability to assess the status of biodiversity and predict change. NASA's Global Ecosystem Dynamics Investigation (GEDI) provides a new opportunity to measure 3D plant canopy structure of the world's temperate, Mediterranean and tropical ecosystems, but its potential to map structural diversity is not yet tested. Here, we use wall-to-wall airborne laser scanning (ALS) to simulate GEDI data (GEDIsim) over 7380 km2 in the southern Sierra Nevada mountains in California and evaluate how well GEDI's sampling scheme captures patterns of structural diversity. We evaluate functional richness and functional beta diversity in a biodiversity hot spot. GEDIsim performed well for trait retrievals (r2 = 0.68) and functional richness mapping (r2 = 0.75) compared to ALS retrievals, despite lower correlations in complex terrain with steep slopes. Functional richness patterns were strongly associated with soil organic carbon stocks and density as well as variables related to water availability and could be appropriately mapped by GEDIsim with and without cloud cover. Functional beta diversity was more strongly related to local changes in topography and more challenging to map, especially with decreasing sampling density. The reduced number of GEDIsim shots when simulating cloud cover lead to a strong overestimation of beta diversity and a reduction of r2 from 0.64 to 0.40 compared to ALS. The ability to map functional richness has been demonstrated with potential application at continental scales that could be transformative for our understanding of large-scale patterns of plant canopy structure, diversity and potential links to animal diversity, movement and habitats.
The GEDI Simulator: A Large‐Footprint Waveform Lidar Simulator for Calibration and Validation of Spaceborne Missions
NASA's Global Ecosystem Dynamics Investigation (GEDI) is a spaceborne lidar mission which will produce near global (51.6°S to 51.6°N) maps of forest structure and above‐ground biomass density during its 2‐year mission. GEDI uses a waveform simulator for calibration of algorithms and assessing mission accuracy. This paper implements a waveform simulator, using the method proposed in Blair and Hofton (1999; https://doi.org/10.1029/1999GL010484), and builds upon that work by adding instrument noise and by validating simulated waveforms across a range of forest types, airborne laser scanning (ALS) instruments, and survey configurations. The simulator was validated by comparing waveform metrics derived from simulated waveforms against those derived from observed large‐footprint, full‐waveform lidar data from NASA's airborne Land, Vegetation, and Ice Sensor (LVIS). The simulator was found to produce waveform metrics with a mean bias of less than 0.22 m and a root‐mean‐square error of less than 5.7 m, as long as the ALS data had sufficient pulse density. The minimum pulse density required depended upon the instrument. Measurement errors due to instrument noise predicted by the simulator were within 1.5 m of those from observed waveforms and 70–85% of variance in measurement error was explained. Changing the ALS survey configuration had no significant impact on simulated metrics, suggesting that the ALS pulse density is a sufficient metric of simulator accuracy across the range of conditions and instruments tested. These results give confidence in the use of the simulator for the pre‐launch calibration and performance assessment of the GEDI mission. Plain Language Summary NASA's Global Ecosystem Dynamics Investigation (GEDI) will be the first spaceborne lidar optimized for forest measurement and will produce a range of near‐global forest products. This paper assesses the accuracy of the GEDI simulator, which underpins the pre‐launch calibration of GEDI's data products. Key Points GEDI's simulator has been validated and found accurate enough for pre‐launch calibration activities The uncertainties of the simulator have been quantified and ALS beam density identified as a sufficient measure of accuracy Interesting quirks of full‐waveform metrics have been highlighted and investigated
GEDI launches a new era of biomass inference from space
Accurate estimation of aboveground forest biomass stocks is required to assess the impacts of land use changes such as deforestation and subsequent regrowth on concentrations of atmospheric CO2. The Global Ecosystem Dynamics Investigation (GEDI) is a lidar mission launched by NASA to the International Space Station in 2018. GEDI was specifically designed to retrieve vegetation structure within a novel, theoretical sampling design that explicitly quantifies biomass and its uncertainty across a variety of spatial scales. In this paper we provide the estimates of pan-tropical and temperate biomass derived from two years of GEDI observations. We present estimates of mean biomass densities at 1 km resolution, as well as estimates aggregated to the national level for every country GEDI observes, and at the sub-national level for the United States. For all estimates we provide the standard error of the mean biomass. These data serve as a baseline for current biomass stocks and their future changes, and the mission’s integrated use of formal statistical inference points the way towards the possibility of a new generation of powerful monitoring tools from space.
New 3D measurements of large redwood trees for biomass and structure
Large trees are disproportionately important in terms of their above ground biomass (AGB) and carbon storage, as well as their wider impact on ecosystem structure. They are also very hard to measure and so tend to be underrepresented in measurements and models of AGB. We show the first detailed 3D terrestrial laser scanning (TLS) estimates of the volume and AGB of large coastal redwood Sequoia sempervirens trees from three sites in Northern California, representing some of the highest biomass ecosystems on Earth. Our TLS estimates agree to within 2% AGB with a species-specific model based on detailed manual crown mapping of 3D tree structure. However TLS-derived AGB was more than 30% higher compared to widely-used general (non species-specific) allometries. We derive an allometry from TLS that spans a much greater range of tree size than previous models and so is potentially better-suited for use with new Earth Observation data for these exceptionally high biomass areas. We suggest that where possible, TLS and crown mapping should be used to provide complementary, independent 3D structure measurements of these very large trees.
Patterns of regional site index across a North American boreal forest gradient
Forest structure—the height, cover, vertical complexity, and spatial patterns of trees—is a key indicator of productivity variation across forested extents. During the 2017 and 2019 growing seasons, NASA’s Arctic-Boreal Vulnerability Experiment collected full-waveform airborne LiDAR using the land, vegetation and imaging sensor, sampling boreal and tundra landscapes across a variety of ecological regions from central Canada westward through Alaska. Here, we compile and archive a geo-referenced gridded suite of these data that include vertical structure estimates and novel horizontal cover estimates of vegetation canopy cover derived from vegetation’s vertical LiDAR profile. We validate these gridded estimates with small footprint airborne LiDAR, and link >36 million of them with stand age estimates from a Landsat time-series of tree-canopy cover that we confirm with plot-level disturbance year data. We quantify the regional magnitude and variability in site index, the age-dependent rates of forest growth, across 15 boreal ecoregions in North America. With this open archive suite of forest structure data linked to stand age, we bound current forest productivity estimates across a boreal structure gradient whose response to key bioclimatic drivers may change with stand age. These results, derived from a reduction of a large archive of airborne LiDAR and a Landsat time series, quantify forest productivity bounds for input into forest and ecosystem growth models, to update forecasts of changes in North America’s boreal forests by improving the regional parametrization of forest growth rates.
Assessing the general patterns of forest structure: quantifying tree and forest allometric scaling relationships in the United States
AIM: Understanding the drivers of forest structure, function and change is a fundamental problem in both theoretical ecology and applied forestry for carbon mapping and monitoring. An important component of forest ecology research often utilizes allometric equations to scale up local measurements to predict large‐scale forest and ecosystem‐level properties. However, both applied and theoretical allometries in forest ecology (such as metabolic scaling theory, MST) assume that many scaling relationships are insensitive to broad‐scale climate gradients or species life histories. We aim to test these assumptions by mapping continental‐scale forest allometry across environmental gradients in the United States. LOCATION: United States. METHODS: We fit exponents to two allometric relationships in c. 100,000 Forest Inventory Analysis (FIA) field plots: (1) the relationship between the height of an individual tree and its diameter, and (2) plot‐level tree size distributions. We compare fitted exponents to environmental and life‐history variables, such as climate, topography and forest structure, in an attempt to explain allometric variability and deviations from theoretically predicted allometries. RESULTS: We find that the structural allometry of forests varies strongly as a function of location in the United States. Allometric exponents appear to asymptote at approximately where MST theory predicts with increasing forest height, while deviations from MST are partially explained as a function of environmentally driven recruitment limitations and successional status. MAIN CONCLUSIONS: While we find support for invariant tree and stand allometric scaling relationships in forests that are in steady state with regard to demography and resources, we also find considerable spatial variability in forest allometric relationships when steady‐state conditions are violated. These findings suggest that extensions of metabolic scaling theory should incorporate variation in demographic dynamics in younger successional forests, and factors influencing recruitment limitation.
Algorithm Theoretical Basis Document for GEDI Footprint Aboveground Biomass Density
The Global Ecosystem Dynamics Investigation (GEDI) lidar is a multibeam laser altimeter on the International Space Station (ISS). GEDI is the first spaceborne instrument designed to measure vegetation height and to quantify aboveground carbon stocks in temperate and tropical forests and woodlands. This document describes the algorithm theoretical basis underpinning the development of the GEDI Level‐4A (GEDI04_A) footprint aboveground biomass density (AGBD) data product. The GEDI04_A data product contains estimates of AGBD for individual GEDI footprints and associated prediction intervals. The algorithm uses GEDI02_A relative height metrics and 13 linear models to predict AGBD in 32 combinations of plant functional type and world region within the observation limits of the ISS. GEDI04_A models for the release 1 and release 2 data products were developed using 8,587 quality‐filtered simulated GEDI waveforms associated with field estimates of AGBD in 21 countries. Although this is the most geographically comprehensive data available for the development of AGBD models using lidar remote sensing, important regions are underrepresented, including the forests of continental Asia, deciduous broadleaf forests and savannas of the dry tropics, and evergreen broadleaf forests north of Australia. We describe the scientific and statistical assumptions required to develop globally representative estimates of AGBD using GEDI lidar, including generalization beyond training data, and exclusion of GEDI02_A observations that do not meet requirements of the GEDI04_A algorithm. The footprint‐level predictions generated by this process provide globally comprehensive estimates of AGBD. These footprint‐level predictions are a prerequisite for the GEDI04_B gridded AGBD data product. Plain Language Summary The amount of carbon stored in aboveground vegetation is uncertain. This uncertainty limits our ability to calculate fluxes of carbon between the land surface and the atmosphere, and prevents rigorous carbon offset crediting in forests. Much of this uncertainty is attributed to inconsistent measurement techniques and the use of Earth‐observation methods that were not designed to quantify carbon density. The Global Ecosystem Dynamics Investigation (GEDI) can largely overcome these challenges by producing measurements of vegetation height using a lidar sensor on the International Space Station. This document describes methods developed by the GEDI Science Team to convert spaceborne measurements of vegetation height into estimates of aboveground biomass density. The algorithms depend on the geographic world region and the type of vegetation that is present at a sampled location. For example, evergreen broadleaf forests of the humid tropics in South America and deciduous broadleaf forests of Europe use different algorithms. Statistical models were developed using comprehensive field measurements and simulated GEDI data. This document describes the importance of filtering GEDI data to reduce the impact of measurement artifacts on aboveground biomass predictions. Quality flags and ancillary data contained in the GEDI04_A data product ensure that the best predictions can be used. Key Points Global Ecosystem Dynamics Investigation (GEDI) aboveground biomass density is from models trained on a comprehensive database of field measurements and simulated GEDI waveforms On‐orbit prediction requires stratification by plant functional type and world region Quality flags and metrics distinguish GEDI measurements that are representative of the conditions under which models were developed
Estimating Time Since the Last Stand-Replacing Disturbance (TSD) from Spaceborne Simulated GEDI Data: A Feasibility Study
Stand-level maps of past forest disturbances (expressed as time since disturbance, TSD) are needed to model forest ecosystem processes, but the conventional approaches based on remotely sensed satellite data can only extend as far back as the first available satellite observations. Stand-level analysis of airborne LiDAR data has been demonstrated to accurately estimate long-term TSD (~100 years), but large-scale coverage of airborne LiDAR remains costly. NASA’s spaceborne LiDAR Global Ecosystem Dynamics Investigation (GEDI) instrument, launched in December 2018, is providing billions of measurements of tropical and temperate forest canopies around the globe. GEDI is a spatial sampling instrument and, as such, does not provide wall-to-wall data. GEDI’s lasers illuminate ground footprints, which are separated by ~600 m across-track and ~60 m along-track, so new approaches are needed to generate wall-to-wall maps from the discrete measurements. In this paper, we studied the feasibility of a data fusion approach between GEDI and Landsat for wall-to-wall mapping of TSD. We tested the methodology on a ~52,500-ha area located in central Idaho (USA), where an extensive record of stand-replacing disturbances is available, starting in 1870. GEDI data were simulated over the nominal two-year planned mission lifetime from airborne LiDAR data and used for TSD estimation using a random forest (RF) classifier. Image segmentation was performed on Landsat-8 data, obtaining image-objects representing forest stands needed for the spatial extrapolation of estimated TSD from the discrete GEDI locations. We quantified the influence of (1) the forest stand map delineation, (2) the sample size of the training dataset, and (3) the number of GEDI footprints per stand on the accuracy of estimated TSD. The results show that GEDI-Landsat data fusion would allow for TSD estimation in stands covering ~95% of the study area, having the potential to reconstruct the long-term disturbance history of temperate even-aged forests with accuracy (median root mean square deviation = 22.14 years, median BIAS = 1.70 years, 60.13% of stands classified within 10 years of the reference disturbance date) comparable to the results obtained in the same study area with airborne LiDAR.
TLS2trees: A scalable tree segmentation pipeline for TLS data
Above‐ground biomass (AGB) is an important metric used to quantify the mass of carbon stored in terrestrial ecosystems. For forests, this is routinely estimated at the plot scale (typically 1 ha) using inventory measurements and allometry. In recent years, terrestrial laser scanning (TLS) has appeared as a disruptive technology that can generate a more accurate assessment of tree and plot scale AGB; however, operationalising TLS methods has had to overcome a number of challenges. One such challenge is the segmentation of individual trees from plot level point clouds that are required to estimate woody volume, this is often done manually (e.g. with interactive point cloud editing software) and can be very time consuming. Here we present TLS2trees, an automated processing pipeline and set of Python command line tools that aims to redress this processing bottleneck. TLS2trees consists of existing and new methods and is specifically designed to be horizontally scalable. The processing pipeline is demonstrated on 7.5 ha of TLS data captured across 10 plots of seven forest types; from open savanna to dense tropical rainforest. A total of 10,557 trees are segmented with TLS2trees: these are compared to 1281 manually segmented trees. Results indicate that TLS2trees performs well, particularly for larger trees (i.e. the cohort of largest trees that comprise 50% of total plot volume), where plot‐wise tree volume bias is ±0.4 m3 and %RMSE is 60%. Segmentation performance decreases for smaller trees, for example where DBH ≤10 cm; a number of reasons are suggested including performance of semantic segmentation step. The volume and scale of TLS data captured in forest plots is increasing. It is suggested that to fully utilise this data for activities such as monitoring, reporting and verification or as reference data for satellite missions an automated processing pipeline, such as TLS2trees, is required. To facilitate improvements to TLS2trees, as well as modification for other laser scanning modes (e.g. mobile and UAV laser scanning), TLS2trees is a free and open‐source software.