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54 result(s) for "Durand, Severine"
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Deciphering neuronal variability across states reveals dynamic sensory encoding
Influenced by non-stationary factors such as brain states and behavior, neurons exhibit substantial response variability even to identical stimuli. However, it remains unclear how their relative impact on neuronal variability evolves over time. To address this question, we designed an encoding model conditioned on latent states to partition variability in the mouse visual cortex across internal brain dynamics, behavior, and external visual stimulus. Applying a hidden Markov model to local field potentials, we consistently identified three distinct oscillation states, each with a unique variability profile. Regression models within each state revealed a dynamic composition of factors influencing spiking variability, with the dominant factor switching within seconds. The state-conditioned regression model uncovered extensive diversity in source contributions across units, varying in accordance with anatomical hierarchy and internal state. This heterogeneity in encoding underscores the importance of partitioning variability over time, particularly when considering the influence of non-stationary factors on sensory processing. How various factors dynamically influence neuronal variability is a longstanding question. Here, the authors build an encoding model to partition variability, revealing heterogeneous source contributions to individual units and state-dependent changes of variability across the visual hierarchy.
Acute head-fixed recordings in awake mice with multiple Neuropixels probes
Multi-electrode arrays such as Neuropixels probes enable electrophysiological recordings from large populations of single neurons with high temporal resolution. By using such probes, the activity from functionally interacting, yet distinct, brain regions can be measured simultaneously by inserting multiple probes into the same subject. However, the use of multiple probes in small animals such as mice requires the removal of a sizable fraction of the skull, while also minimizing tissue damage and keeping the brain stable during the recordings. Here, we describe a step-by-step process designed to facilitate reliable recordings from up to six Neuropixels probes simultaneously in awake, head-fixed mice. The procedure involves four stages: the implantation of a headframe and a removable glass coverslip, the precise positioning of the Neuropixels probes at targeted points on the brain surface, the placement of a perforated plastic imaging window and the insertion of the probes into the brain of an awake mouse. The approach provides access to multiple brain regions and has been successfully applied across hundreds of mice. The procedure has been optimized for dense recordings from the mouse visual system, but it can be adapted for alternative recording configurations to target multiple probes in other brain areas. The protocol is suitable for users with experience in stereotaxic surgery in mice. Simultaneous electrophysiological recordings are obtained from multiple brain regions using Neuropixels probes. The procedure covers the implantation of a headframe, the targeted positioning of probes and their insertion through a perforated imaging window.
Visual physiology of the layer 4 cortical circuit in silico
Despite advances in experimental techniques and accumulation of large datasets concerning the composition and properties of the cortex, quantitative modeling of cortical circuits under in-vivo-like conditions remains challenging. Here we report and publicly release a biophysically detailed circuit model of layer 4 in the mouse primary visual cortex, receiving thalamo-cortical visual inputs. The 45,000-neuron model was subjected to a battery of visual stimuli, and results were compared to published work and new in vivo experiments. Simulations reproduced a variety of observations, including effects of optogenetic perturbations. Critical to the agreement between responses in silico and in vivo were the rules of functional synaptic connectivity between neurons. Interestingly, after extreme simplification the model still performed satisfactorily on many measurements, although quantitative agreement with experiments suffered. These results emphasize the importance of functional rules of cortical wiring and enable a next generation of data-driven models of in vivo neural activity and computations.
The Isotopic Signature of Lead Emanations during the Fire at Notre Dame Cathedral in Paris, France
When Notre Dame de Paris cathedral caught fire on 15 April 2019, lead particles were deposited in its surroundings. Our objective was to determine whether the lead plume had a homogeneous isotopic signature (i.e., a set of homogenous isotopic ratios), and whether, if so, this was different from common sources. In January 2020, dust samples were collected from six areas inside the cathedral, downwind of the fire, as well as from eight roof debris fragments. These samples were mineralized and analyzed using ICP-MS. Their isotopic ratios (207Pb/206Pb and 206Pb/204Pb) were determined and then compared both to each other and to previous published ratios measured in home dusts and blood samples collected in France. The isotopic ratios of dust samples collected inside the cathedral were compatible with each other and with the roof fragments. These isotopic ratios are common and differ neither from those of many other dusts collected in France during the period 2008–2009, nor from those of blood samples collected from children in France during the same period. Moreover, the fire’s isotopic signature is close to the overall signature for Paris. Indeed, it would be difficult to attribute the fire at the cathedral to either lead poisoning or environmental contamination.
Follow-Up of Elevated Blood Lead Levels and Sources in a Cohort of Children in Benin
Lead exposure is associated with poor cognitive development in children. Very few studies in sub-Saharan Africa (SSA) have studied blood lead levels (BLLs) and non-gasoline sources of exposure in children. Data from a birth cohort in Benin (2011-2013) suggested that 58% of 1-year-old children had BLLs > 50 ug/L. We aimed to investigate the prevalence of elevated BLLs (>50 mu g/L and >100 mu g /L) among 425 of these children at 6 years of age in 2016-2018 and to compare BLLs between age 1 and 6 years, and study sources of lead at age 6 years. BLLs were analysed by inductively coupled plasma mass spectrometry. Multiple linear regression and quantile regressions were used to study potential sources of lead. The prevalence of BLLs > 50 mu g/L in children was 59.5% (Geometric Mean (GM) 56.4 mu g/L, 95% CI: 54.1-58.7) at 6 years of age compared to 54.8% (GM 56.5 mu g/L, 95% CI: 53.4-59.6) at 1 year of age. The prevalence of children with BLLs > 100 mu g/L decreased from 14.4% at 1 year of age to 8.2% at 6 years of age. After adjustment for all other covariates, consumption of peanuts more than once per month was significantly associated with a 22.0% (95% CI: 4.6, 42.5) increment in BLLs at age 6 years compared with no consumption. Consumption of bushmeat killed by lead bullets at age 6 years was associated with an increase in the higher percentiles of BLLs (P75) compared with the absence of this source. Other potential sources of lead associated with BLLs with marginal significance were consumption of rice, paternal occupational exposure, and the presence of activity with the potential use of lead. This prospective cohort confirms the persistently high prevalence of elevated BLLs in children residing in a rural region in the south of Benin, as well as the presence of multiple and continuous sources of lead. These results highlight the need for prevention programs to reduce and eliminate lead exposure in children.
Elevated Blood Lead Levels in Infants and Mothers in Benin and Potential Sources of Exposure
Lead in childhood is well known to be associated with poor neurodevelopment. As part of a study on maternal anemia and offspring neurodevelopment, we analyzed blood lead level (BLL) with no prior knowledge of lead exposure in 225 mothers and 685 offspring 1 to 2 years old from Allada, a semi-rural area in Benin, sub-Saharan Africa, between May 2011 and May 2013. Blood samples were analyzed by inductively coupled plasma mass spectrometry. Environmental assessments in households and isotopic ratio measurements were performed for eight children with BLL \\textgreater 100 µg/L. High lead levels (BLL \\textgreater 50 µg/L) were found in 44% of mothers and 58% of children. The median BLL was 55.1 (interquartile range 39.2-85.0) and 46.6 (36.5-60.1) µg/L, respectively. Maternal BLL was associated with offspring's consumption of piped water and animals killed by ammunition. Children's BLL was associated with presence of paint chips in the house and consumption of animals killed by ammunition. In this population, with 98% of children still breastfed, children's BLL was highly associated with maternal BLL on multivariate analyses. Environmental measures and isotopic ratios supported these findings. Offspring may be highly exposed to lead in utero and probably via breastfeeding in addition to lead paint exposure
Reconciling functional differences in populations of neurons recorded with two-photon imaging and electrophysiology
Extracellular electrophysiology and two-photon calcium imaging are widely used methods for measuring physiological activity with single-cell resolution across large populations of cortical neurons. While each of these two modalities has distinct advantages and disadvantages, neither provides complete, unbiased information about the underlying neural population. Here, we compare evoked responses in visual cortex recorded in awake mice under highly standardized conditions using either imaging of genetically expressed GCaMP6f or electrophysiology with silicon probes. Across all stimulus conditions tested, we observe a larger fraction of responsive neurons in electrophysiology and higher stimulus selectivity in calcium imaging, which was partially reconciled by applying a spikes-to-calcium forward model to the electrophysiology data. However, the forward model could only reconcile differences in responsiveness when restricted to neurons with low contamination and an event rate above a minimum threshold. This work established how the biases of these two modalities impact functional metrics that are fundamental for characterizing sensory-evoked responses.
A new washing procedure for inorganic element analysis of hair
Hair incorporates chemical compounds from the bloodstream and external sources as it grows. Different analytical procedures are proposed, but no consensus can be found for external contamination removal (washing stage). Thus, a major limitation of the use of hair analysis for human biomonitoring is the issue related to the washing efficiency, and the objective of this study was to propose a simple washing method for a better cleaning of external contamination. Based on a sequence of three steps of detergent or acid washing (Triton, nitric acid, and hydrochloric acid), the TNCl method was tested on raw and spiked samples and compared to other methods. Thirty-seven inorganic elements were analyzed by inductively Coupled Plasma Mass Spectrometry (ICP-MS) after washing and acid digestion of 10 hair samples (Li, Be, Na, Mg, Al, P, K, Ca, V, Cr, Fe, Mn, Co, N, Cu, Zn, As, Se, Sr, Mo, Ru, Ag, Cd, Sn, Sb, Cs, Ba, La, Ce, Nd, Gd, Lu, Tl, Pb, Bi, Th, and U). The inorganic element concentrations in the hair samples were compared to those reported in the literature. The TNCl method was shown to be more efficient than other methods based on the use of surfactants and organic solvents.
From the risk culture to the local cultures of risk. An ethnographic investigation of living with a constant flood risk in the South East of France
In France, flooding is the leading cause of mortality due to natural disasters and cause very significant economic damage. The question of risk forgetting has been identified as one of the key issues to reduce these negative consequences of flooding. There is need to study this oversight of risk on a long term basis, long after the event takes place and when routines are re-established. This is the challenge faced by the ethnographic dissertation summarized in this article: understanding the mechanisms of risk forgetting by investigating how the issue of flooding occurs in everyday life. The dissertation questions what circulates about flooding between inhabitants and how they organize their practices in relation to the risk. The field of study is a french suburban city which was built on wetlands and remains vulnerable to flash floods. This case study provides insight into the collective mechanisms from invisible danger implementation. The increased visibility of the protection made by local policies and the comforting effect of normative sharing provided a normalization of the trust in the protection. Through the interactions, statements are continually developed in the interests of their acceptability: statements of relativism circulate more than the ones that open on the horizon of danger. Moreover, the current development of a logic of safety for social risks reduction contradicts the prevention of flooding. Above all, neither the links between inhabitants nor the links with their living environment provide a sufficient collective development base for a risk culture deployment.
From the risk culture to the local cultures of risk. An ethnographic investigation of living with a constant flood risk in the South East of France
In France, flooding is the leading cause of mortality due to natural disasters and cause very significant economic damage. The question of risk forgetting has been identified as one of the key issues to reduce these negative consequences of flooding. There is need to study this oversight of risk on a long term basis, long after the event takes place and when routines are re-established. This is the challenge faced by the ethnographic dissertation summarized in this article: understanding the mechanisms of risk forgetting by investigating how the issue of flooding occurs in everyday life. The dissertation questions what circulates about flooding between inhabitants and how they organize their practices in relation to the risk. The field of study is a french suburban city which was built on wetlands and remains vulnerable to flash floods. This case study provides insight into the collective mechanisms from invisible danger implementation. The increased visibility of the protection made by local policies and the comforting effect of normative sharing provided a normalization of the trust in the protection. Through the interactions, statements are continually developed in the interests of their acceptability: statements of relativism circulate more than the ones that open on the horizon of danger. Moreover, the current development of a logic of safety for social risks reduction contradicts the prevention of flooding. Above all, neither the links between inhabitants nor the links with their living environment provide a sufficient collective development base for a risk culture deployment.