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result(s) for
"Escobar, María-José"
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Selection of stimulus parameters for enhancing slow wave sleep events with a neural-field theory thalamocortical model
by
Orio, Patricio
,
Torres, Felipe A.
,
Escobar, María-José
in
Acoustic Stimulation
,
Activity patterns
,
Amplitudes
2021
Slow-wave sleep cortical brain activity, conformed by slow-oscillations and sleep spindles, plays a key role in memory consolidation. The increase of the power of the slow-wave events, obtained by auditory sensory stimulation, positively correlates with memory consolidation performance. However, little is known about the experimental protocol maximizing this effect, which could be induced by the power of slow-oscillation, the number of sleep spindles, or the timing of both events’ co-occurrence. Using a mean-field model of thalamocortical activity, we studied the effect of several stimulation protocols, varying the pulse shape, duration, amplitude, and frequency, as well as a target-phase using a closed-loop approach. We evaluated the effect of these parameters on slow-oscillations (SO) and sleep-spindles (SP), considering: (i) the power at the frequency bands of interest, (ii) the number of SO and SP, (iii) co-occurrences between SO and SP, and (iv) synchronization of SP with the up-peak of the SO. The first three targets are maximized using a decreasing ramp pulse with a pulse duration of 50 ms. Also, we observed a reduction in the number of SO when increasing the stimulus energy by rising its amplitude. To assess the target-phase parameter, we applied closed-loop stimulation at 0°, 45°, and 90° of the phase of the narrow-band filtered ongoing activity, at 0.85 Hz as central frequency. The 0° stimulation produces better results in the power and number of SO and SP than the rhythmic or random stimulation. On the other hand, stimulating at 45° or 90° change the timing distribution of spindles centers but with fewer co-occurrences than rhythmic and 0° phase. Finally, we propose the application of closed-loop stimulation at the rising zero-cross point using pulses with a decreasing ramp shape and 50 ms of duration for future experimental work.
Journal Article
Persistence of EEG Alpha Entrainment Depends on Stimulus Phase at Offset
by
El-Deredy, Wael
,
Prado-Gutiérrez, Pavel
,
Escobar, María-José
in
alpha entrainment
,
alpha rhythm
,
alpha-band phase
2020
Neural entrainment is the synchronization of neural activity to the frequency of repetitive external stimuli, which can be observed as an increase in the electroencephalogram (EEG) power spectrum at the driving frequency, -also known as the steady-state response. Although it has been systematically reported that the entrained EEG oscillation persists for approximately three cycles after stimulus offset, the neural mechanisms underpinning it remain unknown. Focusing on alpha oscillations, we adopt the dynamical excitation/inhibition framework, which suggests that phases of entrained EEG signals correspond to alternating excitatory/inhibitory states of the neural circuitry. We hypothesize that the duration of the persistence of entrainment is determined by the specific functional state of the entrained neural network at the time the stimulus ends. Steady-state visually evoked potentials (SSVEP) were elicited in 19 healthy volunteers at the participants' individual alpha peaks. Visual stimulation consisted of a sinusoidally-varying light terminating at one of four phases: 0, π/2, π, and 3π/2. The persistence duration of the oscillatory activity was analyzed as a function of the terminating phase of the stimulus. Phases of the SSVEP at the stimulus termination were distributed within a constant range of values relative to the phase of the stimulus. Longer persistence durations were obtained when visual stimulation terminated towards the troughs of the alpha oscillations, while shorter persistence durations occurred when stimuli terminated near the peaks. Source localization analysis suggests that the persistence of entrainment reflects the functioning of fronto-occipital neuronal circuits, which might prime the sensory representation of incoming visual stimuli based on predictions about stimulus rhythmicity. Consequently, different states of the network at the end of the stimulation, corresponding to different states of intrinsic neuronal coupling, may determine the time windows over which coding of incoming sensory stimulation is modulated by the preceding oscillatory activity.
Journal Article
Attention maps reveal stimulus-dependent retinal population codes
by
Atkinson, John
,
Palacios, Adrián G.
,
Escobar, María-José
in
attention
,
interpretability
,
latent representations
2026
Understanding how deep learning models map neural population activity to stimuli requires both high predictive accuracy and interpretable internal mechanisms.
In this work, we employ the POYO framework, a scalable transformer architecture based on spike tokenization and latent modeling, to decode large-scale retinal ganglion cell recordings. We ask whether the model's attention mechanisms can provide biologically meaningful insight by evaluating two contrasting conditions: a uniform flash stimulus and a spatiotemporally structured moving ball stimulus.
We show that the model decodes both stimuli reliably and adapts rapidly to new preparations via fine-tuning, suggesting the capture of transferable population codes. We then analyze the model's internal organization, revealing that encoder attention patterns adapt to stimulus complexity: attention heads appear synchronized and broadly distributed for the flash stimulus, whereas they exhibit heterogeneous, specialized allocation strategies for the moving ball. By aggregating attention weights to identify the most relevant neurons for each task, we demonstrate that these high-attention units possess distinct physiological signatures-concentrating sustained, high-firing rates responses for the flash vs. diverse kinetics for the structured input. We confirm the causal validity of these findings via attention-guided ablations, where the progressive removal of these top-ranked units yields systematic losses in decoding performance. Furthermore, we expand the analysis to the decoder's attention, uncovering stimulus-specific retrieval strategies where individual heads exhibit distinct directional tuning preferences.
We conclude that generic attention mechanisms can spontaneously recover biological coding strategies, identifying functionally distinct neural subpopulations without supervision, thus validating the utility of transformer-based architectures for neuroscientific discovery.
Journal Article
Scalable and accurate method for neuronal ensemble detection in spiking neural networks
2021
We propose a novel, scalable, and accurate method for detecting neuronal ensembles from a population of spiking neurons. Our approach offers a simple yet powerful tool to study ensemble activity. It relies on clustering synchronous population activity (population vectors), allows the participation of neurons in different ensembles, has few parameters to tune and is computationally efficient. To validate the performance and generality of our method, we generated synthetic data, where we found that our method accurately detects neuronal ensembles for a wide range of simulation parameters. We found that our method outperforms current alternative methodologies. We used spike trains of retinal ganglion cells obtained from multi-electrode array recordings under a simple ON-OFF light stimulus to test our method. We found a consistent stimuli-evoked ensemble activity intermingled with spontaneously active ensembles and irregular activity. Our results suggest that the early visual system activity could be organized in distinguishable functional ensembles. We provide a Graphic User Interface, which facilitates the use of our method by the scientific community.
Journal Article
Speed-Selectivity in Retinal Ganglion Cells is Sharpened by Broad Spatial Frequency, Naturalistic Stimuli
by
Palacios, Adrián G.
,
Escobar, María-José
,
Perrinet, Laurent U.
in
631/378/3917
,
639/705/117
,
9/10
2019
Motion detection represents one of the critical tasks of the visual system and has motivated a large body of research. However, it remains unclear precisely why the response of retinal ganglion cells (RGCs) to simple artificial stimuli does not predict their response to complex, naturalistic stimuli. To explore this topic, we use Motion Clouds (MC), which are synthetic textures that preserve properties of natural images and are merely parameterized, in particular by modulating the spatiotemporal spectrum complexity of the stimulus by adjusting the frequency bandwidths. By stimulating the retina of the diurnal rodent, Octodon degus with MC we show that the RGCs respond to increasingly complex stimuli by narrowing their adjustment curves in response to movement. At the level of the population, complex stimuli produce a sparser code while preserving movement information; therefore, the stimuli are encoded more efficiently. Interestingly, these properties were observed throughout different populations of RGCs. Thus, our results reveal that the response at the level of RGCs is modulated by the naturalness of the stimulus - in particular for motion - which suggests that the tuning to the statistics of natural images already emerges at the level of the retina.
Journal Article
Characterization of Retinal Functionality at Different Eccentricities in a Diurnal Rodent
by
Reyes, César
,
Palacios, Adrián G.
,
Ibaceta, Cristóbal
in
central vs. periphery
,
Diurnal
,
Electrodes
2018
Although the properties of the neurons of the visual system that process central and peripheral regions of the visual field have been widely researched in the visual cortex and the LGN, they have scarcely been documented for the retina. The retina is the first step in integrating optical signals, and despite considerable efforts to functionally characterize the different types of retinal ganglion cells (RGCs), a clear account of the particular functionality of cells with central vs. peripheral fields is still wanting. Here, we use electrophysiological recordings, gathered from retinas of the diurnal rodent
, to show that RGCs with peripheral receptive fields (RF) are larger, faster, and have shorter transient responses. This translates into higher sensitivity at high temporal frequencies and a full frequency bandwidth when compared to RGCs with more central RF. We also observed that imbalances between ON and OFF cell populations are preserved with eccentricity. Finally, the high diversity of functional types of RGCs highlights the complexity of the computational strategies implemented in the early stages of visual processing, which could inspire the development of bio-inspired artificial systems.
Journal Article
Documentary Analysis of Hypericum perforatum (St. John’s Wort) and Its Effect on Depressive Disorders
by
Escares, Rachelly
,
Ceric, Francisco
,
Miranda-Rojas, Sebastián
in
Antidepressants
,
Anxiety
,
Care and treatment
2024
Hypericum perforatum, also known as St. John’s Wort, pericon, or yellow grass, is known for its antidepressant potential. It could represent a natural alternative to current pharmacological antidepressant treatments, which have a high incidence of side effects in patients and therefore lead to early dropouts. Through a bibliographic revision of clinical trials and information collected from scientific articles during the first period of 2020, we aimed to evaluate whether its administration could be beneficial in the treatment of mild-to-moderate depression, with fewer side effects compared to synthetic drugs. Among the main components, hypericin and hyperforin have been related to the observed antidepressant activity; therefore, their possible mechanism of action was reviewed and highlighted. Furthermore, patients receiving Hypericum extracts were less likely to withdraw from studies because of adverse effects compared to those receiving older standard antidepressants. This review aims to provide suggestions for an alternative treatment of mild-to-moderate depression disorder under the supervision of a medical doctor, since, although it appears to be a potentially efficient treatment with a low presence of adverse effects in comparison to synthetic antidepressants, it might also interact with other medications and lead to therapeutic failures if misused for self-medication.
Journal Article
Role of Institutionalization in Interoception, Emotion Regulation, and Prosocial Behavior in Preschool Children
2026
Although early institutionalization has been linked to socioemotional difficulties, its relationship with interoception in early childhood remains unclear. This study examined differences in interoception, emotion regulation, and prosocial behavior between institutionalized preschool children (IPC) and noninstitutionalized preschool children (NIPC) and explored the associations among these domains.
In total, 51 children aged 4-6 years (26 IPC, 25 NIPC) participated in this study. Interoceptive accuracy (IAc) was assessed using an adapted Jumping Jack Paradigm that combined subjective reports and objective heart rate measures. Interoceptive sensitivity was evaluated using the iBEAT task based on gaze duration toward synchronous and asynchronous stimuli. Cooperation was measured using a joint fishing task, and emotion regulation was assessed using a delayed gratification task and the Early Emotion Regulation Behavior Questionnaire. Group differences were analyzed using one-way analysis of variance. Regression analyses were performed to explore the associations among variables.
Both groups had IAc values close to zero, indicating overall correspondence between subjective and objective signals. However, IPC showed more negative values, indicating underestimation, whereas NIPC showed more positive values, indicating overestimation. No significant differences in interoceptive sensitivity were found, and no evidence of discrimination between synchronous and asynchronous stimuli emerged. Compared with the IPC, the NIPC exhibited greater cooperation. No group differences were found in inhibitory control, although differences were observed in specific emotion regulation strategies. Regression analyses indicated that institutionalization and interoceptive sensitivity predicted IAc, whereas emotion regulation strategies and synchronous preference predicted cooperation.
The results suggest that early institutionalization may induce changes in interoception, emotion regulation, and cooperation.
Journal Article
Selection of stimulus parameters for enhancing slow wave sleep events with a Neural-field theory thalamocortical computational model
by
Torres, Felipe A
,
María-José Escobar
,
Orio, Patricio
in
Activity patterns
,
Computational neuroscience
,
Neuroscience
2021
Abstract Slow-wave sleep cortical brain activity, conformed by slow-oscillations and sleep spindles, plays a key role in memory consolidation. The increase of the power of the slow-wave events, obtained by auditory sensory stimulation, positively correlates to memory consolidation performance. However, little is known about the experimental protocol maximizing this effect, which could be induced by the power of slow-oscillation, the number of sleep spindles, or the timing of both events’ co-occurrence. Using a mean-field model of thalamocortical activity, we studied the effect of several stimulation protocols, varying the pulse shape, duration, amplitude, and frequency, as well as a target-phase using a closed-loop approach. We evaluated the effect of these parameters on slow-oscillations (SO) and sleep-spindles (SP), considering: (i) the power at the frequency bands of interest, (ii) the number of SO and SP, (iii) co-occurrences between SO and SP, and (iv) synchronization of SP with the up-peak of the SO. The first three targets are maximized using a decreasing ramp pulse with a pulse duration of 50 ms. Also, we observed a reduction in the number of SO when increasing the stimulus energy by rising its amplitude. To assess the target-phase parameter, we applied closed-loop stimulation at 0º, 45º, and 90º of the phase of the narrow-band filtered ongoing activity, at 0.85 Hz as central frequency. The 0º stimulation produces better results in the power and number of SO and SP than the rhythmic or aleatory stimulation. On the other hand, stimulating at 45º or 90º change the timing distribution of spindles centers but with fewer co-occurrences than rhythmic and 0º phase. Finally, we propose the application of closed-loop stimulation at the rising zero-cross point using pulses with a decreasing ramp shape and 50 ms of duration for future experimental work. Author summary During the non-REM (NREM) phase of sleep, events that are known as slow oscillations (SO) and spindles (SP) can be detected by EEG. These events have been associated with the consolidation of declarative memories and learning. Thus, there is an ongoing interest in promoting them during sleep by non-invasive manipulations such as sensory stimulation. In this paper, we used a computational model of brain activity that generates SO and SP, to investigate which type of sensory stimulus –shape, amplitude, duration, periodicity– would be optimal for increasing the events’ frequency and their co-occurrence. We found that a decreasing ramp of 50 ms duration is the most effective. The effectiveness increases when the stimulus pulse is delivered in a closed-loop configuration triggering the pulse at a target phase of the ongoing SO activity. A desirable secondary effect is to promote SPs at the rising phase of the SO oscillation. Footnotes * ↵* patricio.orioatuv.cl, mariajose.escobaratusm.cl
Wind Forecasting Based on the HARMONIE Model and Adaptive Finite Elements
by
Oliver, Albert
,
Montero, Gustavo
,
Cascón, José Manuel
in
Algorithms
,
Approximation
,
Discretization
2015
In this paper, we introduce a new method for wind field forecasting over complex terrain. The main idea is to use the predictions of the HARMONIE meso-scale model as the input data for an adaptive finite element mass-consistent wind model. The HARMONIE results (obtained with a maximum resolution of about 1 km) are refined in a local scale (about a few metres). An interface between both models is implemented in such a way that the initial wind field is obtained by a suitable interpolation of the HARMONIE results. Genetic algorithms are used to calibrate some parameters of the local wind field model in accordance to the HARMONIE data. In addition, measured data are considered to improve the reliability of the simulations. An automatic tetrahedral mesh generator, based on the meccano method, is applied to adapt the discretization to complex terrains. The main characteristic of the framework is a minimal user intervention. The final goal is to validate our model in several realistic applications on Gran Canaria island, Spain, with some experimental data obtained by the AEMET in their meteorological stations. The source code of the mass-consistent wind model is available online at
http://www.dca.iusiani.ulpgc.es/Wind3D/
.
Journal Article