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7 result(s) for "Faculté des Sciences de la Nature et de la Vie "
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First evaluation of antibody responses to Culex quinquefasciatus salivary antigens as a serological biomarker of human exposure to Culex bites: A pilot study in Côte d’Ivoire
Culex mosquitoes are vectors for a variety of pathogens of public health concern. New indicators of exposure to Culex bites are needed to evaluate the risk of transmission of associated pathogens and to assess the efficacy of vector control strategies. An alternative to entomological indices is the serological measure of antibodies specific to mosquito salivary antigens. This study investigated whether the human IgG response to both the salivary gland extract and the 30 kDa salivary protein of Culex quinquefasciatus may represent a proxy of human exposure to Culex bites. A multidisciplinary survey was conducted with children aged 1 to 14 years living in neighborhoods with varying exposure to Culex quinquefasciatus in the city of Bouaké, Côte d'Ivoire. Children living in sites with high exposure to Cx quinquefasciatus had a significantly higher IgG response to both salivary antigens compared with children living in the control site where only very few Culex were recorded. Moreover, children from any Culex-high exposed sites had significantly higher IgG responses only to the salivary gland extract compared with children from the control village, whereas no difference was noted in the anti-30 kDa IgG response. No significant differences were noted in the specific IgG responses between age and gender. Sites and the use of a bed net were associated with the level of IgG response to the salivary gland extract and to the 30 kDa antigen, respectively. These findings suggest that the IgG response to Culex salivary gland extracts is suitable as proxy of exposure; however, the specificity to the Culex genus needs further investigation. The lower antigenicity of the 30 kDa recombinant protein represents a limitation to its use. The high specificity of this protein to the Culex genus makes it an attractive candidate and other specific antibody responses might be more relevant as a biomarker of exposure. These epidemiological observations may form a starting point for additional work on developing serological biomarkers of Culex exposure.
Biogeography and ecology of the Algerian island flora
Background and aims – In spite of their proximity to the coasts, the flora of the islands and islets of the Algerian coasts has been poorly studied. This work is the first to provide an overall view of the richness and the determinants of the Algerian island flora. Material and methods – The study is based on a compilation of original floristic data. Two classifications of 30 islands and islets were derived from PCA and HCPC performed on the species occurrence matrix and on a matrix of flora descriptors including species richness, functional traits (life form, seed dispersal, pollination), and biogeographic range. We performed an RDA to explain the variation in flora characteristics by a set of physiographic (longitude, latitude, elevation, area, isolation, steepness index, and area/perimeter ratio) and biotic (seabird density and human presence) variables. Key results – The floristic inventory encompassed a total richness of 295 vascular plant taxa (including subspecies and varieties) on the 30 studied sites. Five main groups of islands and islets can be distinguished based on vegetation composition and three from flora descriptors. RDA model selection revealed that the combination of four variables (seabird density, area, latitude, and longitude) explained 26.6% of the variation in flora characteristics. Taken alone, the density of yellow-legged gull colonies and the island area were the main drivers of this variation. Results showed that floristic richness was associated with larger island area and higher seabird density, the importance of some plant functional traits, such as zoochory and entomogamy, and with a higher proportion of Eurasian holarctic species. Conclusion – In the context of island flora conservation, some of these small islands of Algeria can be considered as “modern refuges” from human pressures, and this is particularly important in the context of Mediterranean ecosystems characterised by a quasi-permanent human impact in various habitats. Two new important plant areas (IPAs) for Algeria are proposed following the results of these floristic inventories.
Newly Isolated Lactobacilli strains from Algerian Human Vaginal Microbiota: Lactobacillus fermentum Strains Relevant Probiotic’s Candidates
Lactobacilli strains are considered as a preventive means for treatment of vaginal infections or post-antibiotic treatment to repopulate the vaginal mucosa. This study aimed at establishing the vaginal lactobacillus profile of Algerian women with different vaginal diseases. Afterwards, lactobacilli isolated from swabs were in vitro characterized for their probiotic hallmarks. This prospective study allowed isolation of 44 Lactobacillus strains and 160 potentially pathogens, among which are Escherichia coli (50 isolates), Staphylococcus sp. (38 isolates), Enterococcus sp. (16 isolates), and Candida sp. (56 isolates). All Lactobacilli strains were characterized for their antagonism, adhesion to polystyrene, and resistance to acidity and bile. Consequently, six Lactobacillus strains ( Lb. fermentum 5LB4, 5LB10, 5LB12, Lb. plantarum 5LB2, 5LB11, and Lactobacillus sp. 4LB9) were moderately or weakly adherent, and 35 potentially pathogens exhibited weak to strong adhesion to polystyrene. Antagonism was recorded for 36 Lactobacillus strains towards E. coli 6E2, S. aureus 7S3, Enterococcus sp. 5EN8, and Candida albicans C1 used as indicator organisms. Finally, Lb. fermentum 9LB6, 4LB16, and 10LB1 and Lb. plantarum 9LB4 were remarkable for their inhibitory activity, absence of hemolytic potential, and for their resistance to acidity (pH 1.5) and bile (0.5%) harsh conditions.
Genetic structure of the date palm (Phoenix dactylifera) in the Old World reveals a strong differentiation between eastern and western populations
BACKGROUND AND AIMS: Date palms (Phoenix dactylifera, Arecaceae) are of great economic and ecological value to the oasis agriculture of arid and semi-arid areas. However, despite the availability of a large date palm germplasm spreading from the Atlantic shores to Southern Asia, improvement of the species is being hampered by a lack of information on global genetic diversity and population structure. In order to contribute to the varietal improvement of date palms and to provide new insights on the influence of geographic origins and human activity on the genetic structure of the date palm, this study analysed the diversity of the species. METHODS: Genetic diversity levels and population genetic structure were investigated through the genotyping of a collection of 295 date palm accessions ranging from Mauritania to Pakistan using a set of 18 simple sequence repeat (SSR) markers and a plastid minisatellite. KEY RESULTS: Using a Bayesian clustering approach, the date palm genotypes can be structured into two different gene pools: the first, termed the Eastern pool, consists of accessions from Asia and Djibouti, whilst the second, termed the Western pool, consists of accessions from Africa. These results confirm the existence of two ancient gene pools that have contributed to the current date palm diversity. The presence of admixed genotypes is also noted, which points at gene flows between eastern and western origins, mostly from east to west, following a human-mediated diffusion of the species. CONCLUSIONS: This study assesses the distribution and level of genetic diversity of accessible date palm resources, provides new insights on the geographic origins and genetic history of the cultivated component of this species, and confirms the existence of at least two domestication origins. Furthermore, the strong genetic structure clearly established here is a prerequisite for any breeding programme exploiting the effective polymorphism related to each gene pool.
Genome-wide analysis highlights genetic dilution in Algerian sheep
Algeria represents a reservoir of genetic diversity with local sheep breeds adapted to a large range of environments and showing specific features necessary to deal with harsh conditions. This remarkable diversity results from the traditional management of dryland by pastoralists over centuries. Most of these breeds are poorly productive, and the economic pressure leads farmers to realize anarchic cross-breeding (that is, not carried out in the framework of selection plans) with the hope to increase animal's conformation. In this study, eight of the nine local Algerian sheep breeds (D'men, Hamra, Ouled-Djellal, Rembi, Sidaoun, Tazegzawt, Berber and Barbarine) were investigated for the first time by genome-wide single-nucleotide polymorphism genotyping. At an international scale, Algerian sheep occupied an original position shaped by relations with African and European (particularly Italian) breeds. The strong genetic proximity with Caribbean and Brazilian breeds confirmed that the genetic make-up of these American breeds was largely influenced by the Atlantic slave trade. At a national scale, an alarming genetic dilution of the Berber (a primitive breed) and the Rembi was observed, as a consequence of uncontrolled mating practices with Ouled-Djellal. A similar, though less pronounced, phenomenon was also detected for the Barbarine, another ancestral breed. Genetic originality appeared to be better preserved in Tazegzawt, Hamra, D'men and Sidaoun. These breeds should be given high priority in the establishment of conservation plans to halt their progressive loss. For Berber and Barbarine that also occur in the bordering neighbor countries, urgent concerted transnational actions are needed.
The Atriplex genus: a promising resource for phytoremediation of heavy metal and metalloid-contaminated sites in arid regions
Phytoremediation of areas polluted by heavy metals and toxic metalloids is challenging, particularly in arid regions where limited water availability compromises plant establishment. This study shows that several Atriplex species ( A. halimus, A. canescens, A. nummularia, A. atacamensis, A. hortensis , etc.) can be used in a phytostabilization and/or phytoextraction strategy. Many of these species are xero-halophytic plants with C 4 metabolism that are adapted to harsh conditions. A deep root system allows contaminants to be removed from deep within the soil. These species can accumulate heavy metals and toxic metalloid elements and develop tolerance mechanisms associated with the synthesis of osmoprotective compounds (proline and glycinebetaine), phytochelatins and metallothioneins, and endogenous antioxidant compounds. Sequestration of toxic elements in cell walls or excretion into leaf trichomes contributes to this tolerance. In many cases, transfer factors greater than 1 suggest that these plants can be used to decontaminate polluted sites. Adult plants can produce 3 t.ha -1 of dry matter, and the quantities of pollutants effectively removed from the soil can be significant (from 500 g to several kg per hectare in a single harvest, depending on the pollutant). The application of chelating agents can be useful in increasing the bioavailability of toxic elements, and fertilization, mainly with nitrogen, may be required when the soil is not very fertile and a high plant density (up to 4,000 plants per hectare) is used to help combat erosion. Species of the genus Atriplex are characterized by significant intraspecific genetic variability, and their use therefore requires prior identification of the material best suited to the various pollutants present. Many species of this fascinating genus constitute particularly promising plant material for the low-cost management of large areas of polluted land in arid regions, helping to combat erosion, gradually decontaminate the soil, and restore the ecological balance of marginal areas.
Purification and Characterization of the Xylanase Produced by Jonesia denitrificans BN-13
Jonesia denitrificans BN-13 produces six xylanases: Xyl1, Xyl2, Xyl3, Xyl4, Xyl5, and Xyl6; the Xyl4 was purified and characterized after two consecutive purification steps using ultrafiltration and anion exchange chromatography. The xylanase-specific activity was found to be 77 unit (U)/mg. The molecular weight of the Xyl4 estimated using sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS–PAGE) revealed a monomeric isoenzyme of about 42 kDa. It showed an optimum pH value of 7.0 and a temperature of 50 °C. It was stable at 50 °C for 9.34 h. The enzyme showed to be activated by Mn⁺², β-mercaptoethanol, and dithiothreitol (DTT) with a high affinity towards birchwood xylan (with a K ₘ of 1 mg ml⁻¹) and hydrolysis of oat-spelt xylan with a K ₘ of 1.85 mg ml⁻¹. The ability of binding to cellulose and/or xylan was also investigated.