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result(s) for
"Farias, José R. B."
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Characterization of Soybean Genetically Modified for Drought Tolerance in Field Conditions
by
Neumaier, Norman
,
de Oliveira, Maria C. N.
,
Farias, José R. B.
in
Abiotic stress
,
Abscisic acid
,
Agricultural production
2017
Drought is one of the most stressful environmental factor causing yield and economic losses in many soybean-producing regions. In the last decades, transcription factors (TFs) are being used to develop genetically modified plants more tolerant to abiotic stresses. Dehydration responsive element binding (DREB) and ABA-responsive element-binding (AREB) TFs were introduced in soybean showing improved drought tolerance, under controlled conditions. However, these results may not be representative of the way in which plants behave over the entire season in the real field situation. Thus, the objectives of this study were to analyze agronomical traits and physiological parameters of
(1Ab58),
(1Bb2193), and
(1Ea2939) GM lines under irrigated (IRR) and non-irrigated (NIRR) conditions in a field experiment, over two crop seasons and quantify transgene and drought-responsive genes expression. Results from season 2013/2014 revealed that line 1Ea2939 showed higher intrinsic water use and leaf area index. Lines 1Ab58 and 1Bb2193 showed a similar behavior to wild-type plants in relation to chlorophyll content. Oil and protein contents were not affected in transgenic lines in NIRR conditions. Lodging, due to plentiful rain, impaired yield from the 1Ea2939 line in IRR conditions. qPCR results confirmed the expression of the inserted TFs and drought-responsive endogenous genes. No differences were identified in the field experiment performed in crop season 2014/2015, probably due to the optimum rainfall volume during the cycle. These field screenings showed promising results for drought tolerance. However, additional studies are needed in further crop seasons and other sites to better characterize how these plants may outperform the WT under field water deficit.
Journal Article
Insights into soybean transcriptome reconfiguration under hypoxic stress: Functional, regulatory, structural, and compositional characterization
by
Neumaier, Norman
,
Farias, José R. B.
,
Emygdio, Beatriz M.
in
Abscisic acid
,
Aerobic respiration
,
Amino acids
2017
Soybean (Glycine max) is one of the major crops worldwide and flooding stress affects the production and expansion of cultivated areas. Oxygen is essential for mitochondrial aerobic respiration to supply the energy demand of plant cells. Because oxygen diffusion in water is 10,000 times lower than in air, partial (hypoxic) or total (anoxic) oxygen deficiency is important component of flooding. Even when oxygen is externally available, oxygen deficiency frequently occurs in bulky, dense or metabolically active tissues such as phloem, meristems, seeds, and fruits. In this study, we analyzed conserved and divergent root transcriptional responses between flood-tolerant Embrapa 45 and flood-sensitive BR 4 soybean cultivars under hypoxic stress conditions with RNA-seq. To understand how soybean genes evolve and respond to hypoxia, stable and differentially expressed genes were characterized structurally and compositionally comparing its mechanistic relationship. Between cultivars, Embrapa 45 showed less up- and more down-regulated genes, and stronger induction of phosphoglucomutase (Glyma05g34790), unknown protein related to N-terminal protein myristoylation (Glyma06g03430), protein suppressor of phyA-105 (Glyma06g37080), and fibrillin (Glyma10g32620). RNA-seq and qRT-PCR analysis of non-symbiotic hemoglobin (Glyma11g12980) indicated divergence in gene structure between cultivars. Transcriptional changes for genes in amino acids and derivative metabolic process suggest involvement of amino acids metabolism in tRNA modifications, translation accuracy/efficiency, and endoplasmic reticulum stress in both cultivars under hypoxia. Gene groups differed in promoter TATA box, ABREs (ABA-responsive elements), and CRT/DREs (C-repeat/dehydration-responsive elements) frequency. Gene groups also differed in structure, composition, and codon usage, indicating biological significances. Additional data suggests that cis-acting ABRE elements can mediate gene expression independent of ABA in soybean roots under hypoxia.
Journal Article
Transcriptional Profiles of Roots of Different Soybean Genotypes Subjected to Drought Stress
by
Neumaier, Norman
,
Marcelino, Francismar C
,
Carareto-Alves, Lúcia
in
biochemical pathways
,
Bioinformatics
,
Biomedical and Life Sciences
2011
To identify differentially expressed genes in soybean grown under different drought conditions, cDNA libraries from roots of different genotypes were constructed. Genes of contrasting genotypes of soybean were found to be differentially expressed in plants exposed to drought conditions. A total of 753 no redundant clones were identified by PCR, and these were printed on microarray glass slides. Probes of total RNA were prepared from bulked roots subjected to 25 and 50 min (Bulk 1) or 75 and 100 min (Bulk 2) of drought stress. Differential expression of 145 genes, involved in metabolic pathways responsive to biotic and abiotic stresses, was observed. These genes were classified into nine functional categories, including energy, transcription factors, metabolism, stress response, protein synthesis, cell communication, cell cycle, cell transport, and unknown function. The functionality of some of these genes was confirmed by quantitative real-time PCR (qRT-PCR).
Journal Article
Molecular, physiological, and agronomical characterization, in greenhouse and in field conditions, of soybean plants genetically modified with AtGolS2 gene for drought tolerance
by
Neumaier, Norman
,
de Oliveira, Maria C. N.
,
Farias, José R. B.
in
Agronomy
,
Bioaccumulation
,
Biomedical and Life Sciences
2016
Water deficit may occur at any stage of crop development, affecting productivity and causing economic losses. In response to drought, raffinose family oligosaccharides (RFOs) are accumulated in plant tissues stabilizing and protecting cell membranes and keeping the vital functions. The enzyme galactinol synthase (GolS, EC 2.4.1.123) catalyzes the first step in the biosynthesis of RFOs. In our study, soybean events overexpressing
35S:AtGolS2
were molecularly, physiological, and agronomical characterized, under drought simulated in greenhouse and in field conditions during the crop season 2014/2015. The conventional soybean cultivar BRS 184 was transformed and five positive events were obtained. Four events transmitted the transgene to further generations and in the events 2Ia1 and 2Ia4, two to four copies of
AtGols2
gene were observed. Results in greenhouse showed that the overexpression of
AtGolS2
in genetically modified (GM) plants led to increased galactinol transcripts, probably resulting in changes in carbohydrate metabolism. Accumulation of these transcripts that may have acted as osmoprotectors, lead to higher drought tolerance and survival rate of 2Ia4 plants. In addition, in field conditions, higher yield was observed for 2Ia4 plants under irrigated (IRR) and non-irrigated (NIRR) treatments. This result can be due to the increased synthesis of RFOs even under well-watered conditions. This field screening showed promising results for drought tolerance, suggesting that 2Ia4 plants may be useful in a breeding program for the development of drought-tolerant plants. However, additional studies are needed in further crop seasons and other sites to better characterize how these plants may outperform the WT plants under water deficit.
Journal Article
Growth and transpiration of soybean genotypes with AtAREB1 transcription factor for tolerance to water deficit
by
Zanon, Alencar J.
,
Neumaier, Norman
,
Streck, Nereu A.
in
Agriculture
,
Biomedical and Life Sciences
,
Bmx protein
2024
The objectives of this study were (i) to identify growth and physiological changes in soybean resulting from the insertion of the TF AtAREB1, both in the original 1Ea2939 event and in an improved genotype derived from the cross between 1Ea2939 and the elite cultivar BMX Desafio RR; (ii) to determine the ecophysiological traits contributing to drought tolerance in soybean with the TF AtAREB1, compared to commercial cultivars, using the fraction of transpirable soil water (FTSW) approach; and (iii) to evaluate the field performance of AtAREB1 genotypes in comparison to their parents. Greenhouse experiments were conducted to evaluate leaf transpiration rates, leaf growth, dry matter accumulation, gas exchange, and water use efficiency (WUE) in four commercial cultivars, as well as in the AtAREB1 genotypes 1Ea2939 and BRT18-0280. Additionally, a field experiment was carried out to assess grain yield and water use efficiency in AtAREB1 genotypes. The “AtAREB1” genotypes exhibited reduced daily transpiration rates in both irrigated and dry environments compared to the commercial cultivars. The higher drought tolerance can be attributed to a lower FTSW threshold for leaf transpiration rate, a higher root/shoot ratio, and prolonged survival during drought conditions.The “BRT18-0280” genotype showed a higher yield and water use efficiency under field conditions. This study indicates that soybean with TF AtAREB1 is an alternative to increase soybean tolerance to water deficit in regions where drought is a limiting factor for high yields.
Journal Article
Effect of Water Deficit-Induced at Vegetative and Reproductive Stages on Protein and Oil Content in Soybean Grains
by
Oliveira, Maria
,
Neumaier, Norman
,
Santos, Elizeu
in
Agricultural industry
,
Agrochemicals
,
Brazil
2018
Soybean is one of the most common grain crops worldwide, representing an important protein and oil source. Although genetic variability in the chemical composition of grains is seen in soybean, the mean levels of proteins have remained stagnant or, in some cases, have decreased over time, arousing concern in the agricultural industry. Furthermore, environmental conditions influence the chemical composition of grains. Thus, the present study evaluated the effect of water deficit (WD) induced at the vegetative period (vegetative stress (VS)) and reproductive period (reproductive stress (RS)) on the protein and oil contents of grains in different soybean genotypes. Yield and its components were evaluated to evaluate the interrelation of these traits. The experiment was completed over three crop seasons under field conditions in Londrina, Paraná (PR), Brazil. WD was induced using rainout shelters and then stress treatments with irrigated and non-irrigated conditions were compared. WD negatively affected yield and its components. All evaluated genotypes showed similar responses for oil and protein contents under different water conditions. Higher protein content and lower oil content were observed in grains under RS. Such a relationship was not equally established under VS. Additionally, negative relationships between protein and oil content and between protein content and yield were confirmed.
Journal Article
Silicon attenuates calcium deficiency by increasing ascorbic acid content, growth and quality of cabbage leaves
by
Mattiuz, Ben-Hur
,
da Silva, Dalila Lopes
,
de Mello Prado, Renato
in
631/449
,
631/449/1736
,
631/449/2653
2021
Calcium (Ca) deficiency in cabbage plants induces oxidative damage, hampering growth and decreasing quality, however, it is hypothesized that silicon (Si) added to the nutrient solution may alleviate crop losses. Therefore, this study aims at evaluating whether silicon supplied in the nutrient solution reduces, in fact, the calcium deficiency effects on cabbage plants. In a greenhouse, cabbage plants were grown using nutrient solutions with Ca sufficiency and Ca deficiency (5 mM) without and with added silicon (2.5 mM), arranged as a 2 × 2 factorial in randomized blocks, with five replications. At 91 days after transplanting, the plants were harvested for biological evaluations. In the treatment without added Si, Ca deficiency promoted oxidative stress, low antioxidant content, decreased dry matter, and lower quality leaf. On the other hand, added Si attenuated Ca deficiency in cabbage by decreasing cell extravasation while increasing both ascorbic acid content and fresh and dry matter, providing firmer leaves due to diminished leaf water loss after harvesting. We highlighted the agronomic importance of Si added to the nutrient solution, especially in crops at risk of Ca deficiency.
Journal Article
Rivaroxaban in Patients with Atrial Fibrillation and a Bioprosthetic Mitral Valve
by
Zilli, Alexandre C
,
Cavalcante, Margaret A
,
Berwanger, Otavio
in
Aged
,
Anticoagulants
,
Anticoagulants - adverse effects
2020
In this randomized trial comparing rivaroxaban with dose-adjusted warfarin in patients with atrial fibrillation and a bioprosthetic mitral valve, rivaroxaban was noninferior to warfarin with respect to the mean time until the primary outcome of death, major cardiovascular events, or major bleeding at 12 months.
Journal Article
Chemical composition and biological activities of two chemotype-oils from Cinnamomum verum J. Presl growing in North Brazil
by
Figueiredo Pablo Luis B
,
Rodrigues, Antonia Alice
,
Monteiro Odair dos S
in
Antifungal activity
,
Antioxidants
,
Bark
2020
Chemical composition and antioxidant and antifungal action of the oils from leaves and wood bark of two chemotypes of Cinnamomum verum J. Presl were evaluated. Plants were sampled in the cities of São Luís and Santa Inês, state of Maranhão, Brazil. GC–MS and GC-FID, DPPH radical scavenging, and in vitro test against the phytopathogenic fungus Colletotrichum musae were used to perform these analyses. Cinnamomum verum is worldwide known as Cinnamon, highlighted for its extensive use in the cooking of diverse cultures of the world, and as a medicinal plant to treat environmental viral diseases. In the leaf oil of São Luís chemotype, eugenol (93.6%) was the main constituent, while in Santa Inês chemotype, it was benzyl benzoate (95.3%). In the bark wood oil of São Luís chemotype, (E)-cinnamaldehyde (89.3%) was the main constituent, while in Santa Inês chemotype, they were benzyl benzoate (23.3%), linalool (14.0%), (E)-caryophyllene (9.1%), caryolan-8-ol (7.2%) and borneol (4.7%). Leaf oils from both chemotypes showed strong to moderate antifungal activity, reaching 100% efficacy in eugenol-containing oils and above 70% in benzyl benzoate oils. In the antioxidant evaluation, the chemotype with a high eugenol content presented an inhibitory concentration higher than 80%, compared to Trolox. The leaf oils of the two C. verum chemotypes showed significant antifungal and antioxidant potential, considering their economic use as a functional and nutraceutical food supplement.
Journal Article
Functionally Graded Materials and Structures: Unified Approach by Optimal Design, Metal Additive Manufacturing, and Image-Based Characterization
by
Farias, Francisco Werley Cipriano
,
Silva, Rui F.
,
Coelho, Pedro G.
in
3D printing
,
Additive manufacturing
,
Aerospace engineering
2024
Functionally Graded Materials (FGMs) can outperform their homogeneous counterparts. Advances in digitalization technologies, mainly additive manufacturing, have enabled the synthesis of materials with tailored properties and functionalities. Joining dissimilar metals to attain compositional grading is a relatively unexplored research area and holds great promise for engineering applications. Metallurgical challenges may arise; thus, a theoretical critical analysis is presented in this paper. A multidisciplinary methodology is proposed here to unify optimal design, multi-feed Wire-Arc Additive Manufacturing (WAAM), and image-based characterization methods to create structure-specific oriented FGM parts. Topology optimization is used to design FGMs. A beam under pure bending is used to explore the layer-wise FGM concept, which is also analytically validated. The challenges, limitations, and role of WAAM in creating FGM parts are discussed, along with the importance of numerical validation using full-field deformation data. As a result, a conceptual FGM engineering workflow is proposed at this stage, enabling digital data conversion regarding geometry and compositional grading. This is a step forward in processing in silico data, with a view to experimentally producing parts in future. An optimized FGM beam, revealing an optimal layout and a property gradient from iron to copper along the build direction (bottom–up) that significantly reduces the normal pure bending stresses (by 26%), is used as a case study to validate the proposed digital workflow.
Journal Article