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We studied community–environment relationships of lake macrophytes at two metacommunity scales using data from 16 regions across the world. More specifically, we examined (a) whether the lake macrophyte communities respond similar to key local environmental factors, major climate variables and lake spatial locations in each of the regions (i.e., within-region approach) and (b) how well can explained variability in the community–environment relationships across multiple lake macrophyte metacommunities be accounted for by elevation range, spatial extent, latitude, longitude, and age of the oldest lake within each metacommunity (i.e., across-region approach). In the within-region approach, we employed partial redundancy analyses together with variation partitioning to investigate the relative importance of local variables, climate variables, and spatial location on lake macrophytes among the study regions. In the across-region approach, we used adjusted R2 values of the variation partitioning to model the community–environment relationships across multiple metacommunities using linear regression and commonality analysis. We found that niche filtering related to local lake-level environmental conditions was the dominant force structuring macrophytes within metacommunities. However, our results also revealed that elevation range associated with climate (increasing temperature amplitude affecting macrophytes) and spatial location (likely due to dispersal limitation) was important for macrophytes based on the findings of the across-metacommunities analysis. These findings suggest that different determinants influence macrophyte metacommunities within different regions, thus showing context dependency. Moreover, our study emphasized that the use of a single metacommunity scale gives incomplete information on the environmental features explaining variation in macrophyte communities.

We traced the origin of dissolved organic matter (DOM) in the large, shallow, eutrophic Lake Võrtsjärv in Estonia. Allochthonous DOM (Al-DOM) had higher δ13C values than autochthonous DOM (Au-DOM). The δ13C of inflow DOM varied from −28.2‰ to −25.4‰ (mean −26.7‰) and in-lake DOM varied from −28.4‰ to −26.1‰ (mean −27.2‰). Low stable isotope (SI) signatures of Au-DOM were caused by relatively 13C-depleted values of its precursors (mainly phytoplankton) with mean δ13C of −28.9‰. SI signatures of dissolved inorganic carbon (DIC) in the inflows and in the lake were also relatively low (from −15.1‰ to −3.28‰). SI values of DOM were lower during the active growing season from May to September and higher from October to April, with the corresponding estimated average proportions of Al-DOM 68% and 81%. The proportion of Al-DOM decreased with increasing water temperature, chlorophyll a, and pH and increased with increasing water level and concentration of yellow substances and DIC. The high proportion of Al-DOM in Võrtsjärv shows that, even in this highly productive ecosystem, the labile Au-DOM produced is rapidly utilized and degraded by microorganisms and thus makes a relatively small contribution to the instantaneous in-lake DOM pool.

Lake Mustijärv was reconstructed by sediment removal following an almost complete siltation. Here we evaluate challenges and opportunities for the management of the lake. We focused on the stream discharging to the lake (i.e., external loading), sediment retention in accumulation basins (i.e., internal processes) as well as the ecosystem-level response to stressors based on biological variables (phyto- and zooplankton, macrophytes, fishes and zoobenthos). Urban and agricultural inputs elevated ammonium and total phosphorus concentrations in the lake, challenging lake reconstruction efforts. Sediment transport highly increased the risk of faster filling of the lake, associated with upstream streambed excavation. Sediments trapped at the accumulation basins release nutrients that enhance eutrophication. We, however, observed a rapid recovery in fish, macrophytes, and zoobenthos, despite the significant disturbances. Lake Mustijärv is in eutrophic condition, reflected by phytoplankton (Pseudanabaena, Closteriopsis dominance) and zooplankton (Keratella, Polyarthra dominance) composition. To improve lake water quality will require controlling external nutrient inputs, underlining the importance of better coordinated activities between the local (lake restoration) and regional (catchment use) scales.  

Documenting the patterns of biological diversity on Earth has always been a central challenge in macroecology and biogeography. However, we are only beginning to generate an understanding of the global patterns and determinants of macrophyte diversity. Here, we studied large-scale variation and community-environment relationships of lake macrophytes along climatic and geographical gradients using regional data from six continents. We applied statistical routines typically used in the context of metacommunity studies to provide novel insights into macrophyte community compositional patterns within regions worldwide. We found that lake macrophyte metacommunities followed clumped species replacement structures, suggesting that two or more species groups were responding similarly to the environment within regions. Underlying such general convergence, our results also provided evidence that community-environment relationships were largely context-dependent, stressing that no single mechanism is enough to account for the complex nature of compositional variation. Surprisingly, we found no general relationships between functional or phylogenetic composition and main metacommunity types, suggesting that linking multi-trait and evolutionary information to the elements of metacommunity structure is not straightforward. Our findings highlight that global conservation initiatives and biodiversity protection need to capture environmental variation at the metacommunity level, and acknowledge the highly context-dependent patterns in the community-environment relationships of lake macrophytes. Overall, we emphasize the need to embrace the potential complexity of ecological inferences in metacommunity organization across the globe.

Macrophytes and factors affecting their distribution were studied in 19 coastal lakes of Estonia. The aim of the study was to determine the factors influencing the distribution of macrophytes in coastal lakes and to assess the suitability of valid macrophyte metrics. Our hypothesis was that in coastal lakes most of the macrophyte distribution patterns are caused by lake-specific variables. Morphological, physico-chemical and catchment area characteristics of the lakes varied greatly. Lakes were in different development stages—lakes nearest to the Baltic Sea were younger and more influenced by brackish water and the furthest lakes were older with more freshwater. All that variability was reflected in macrophyte parameters. Factor analysis of environmental indices divided them into three groups—catchment area, morphometric and water chemistry factors. The first factor may be considered as a pressure and the other two as lake-type-specific factors. Lake catchment area parameters had an influence on Bolboschoenus maritimus , Chara tomentosa and Typha latifolia abundance. Morphometric parameters had an influence on the depth distribution of macrophytes and water chemistry factors on the abundance of helophytes. Current indicator species showed more variability associated with lake-specific factors than with changes in status or the influence of pressures.

The influence of functional group specific production and respiration patterns on a lake's metabolic balance remains poorly investigated to date compared to whole-system estimates of metabolism. We employed a summed component ecosystem approach for assessing lake-wide and functional group-specific metabolism (gross primary production (GPP) and respiration (R)) in shallow and eutrophic Lake Võrtsjärv in central Estonia during three years. Eleven functional groups were considered: piscivorous and benthivorous fish; phyto-, bacterio-, proto- and metazooplankton; benthic macroinvertebrates, bacteria and ciliates; macrophytes and their associated epiphytes. Metabolism of these groups was assessed by allometric equations coupled with daily records of temperature and hydrology of the lake and measurements of food web functional groups biomass. Results revealed that heterotrophy dominated most of the year, with a short autotrophic period observed in late spring. Most of the metabolism of the lake could be attributed to planktonic functional groups, with phytoplankton contributing the highest share (90% of GPP and 43% of R). A surge of protozooplankton and bacterioplankton populations forming the microbial loop caused the shift from auto- to heterotrophy in midsummer. Conversely, the benthic functional groups had overall a very small contribution to lake metabolism. We validated our ecosystem approach by comparing the GPP and R with those calculated from O2 measurements in the lake. Our findings are also in line with earlier productivity studies made with 14C or chlorophyll a (chl-a) based equations. Ideally, the ecosystem approach should be combined with diel O2 approach for investigating critical periods of metabolism shifts caused by dynamics in food-web processes.

We studied the feeding of European perch Perca fluviatilis L. larvae in littoral and pelagic habitats of four different lakes – one Latvian (Auciema) and three Estonian (Akste, Kaiavere, and Prossa). Altogether, 162 perch larvae (81 from both habitats) were collected to estimate the diet composition of gathered larval specimens in spring (2019) using gut content analysis via epifluorescence microscopy. Attention was paid particularly to the question how does the larval perch food composition differ in pelagic and littoral habitats. We hypothesized that the consumption of zooplankton is higher and the larval condition is better in littoral habitats. We assessed the feeding on both protozoo- (ciliates) and metazooplankton and applied multiple indices (Hurlbert’s standardized niche breadth, Ivlev’s selectivity and relative importance index) to evaluate, respectively, the larval fish prey importance, feeding homogeneity and strategies. The results showed that larval length and weight were slightly higher and body condition was slightly better in the lakes’ littoral habitats. The feeding niche of perch larvae was narrower in the littoral, which can indicate more favourable feeding conditions in littoral than lake pelagic habitats. While the small cladocerans (Bosmina longirostrisMüller) were generally the preferred and important food objects, ciliates were avoided and consumed only when their share in the total zooplankton biomass was >40%. However, in shortage of cladocerans, ciliates could be vitally important food objects for perch larvae.

In shallow lakes with large littoral zones, epiphytes and submerged macrophytes can make an important contribution to the total annual primary production. We investigated the primary production (PP) of phytoplankton, submerged macrophytes, and their epiphytes, from June to August 2005, in two large shallow lakes. The production of pelagic and littoral phytoplankton and of the dominant submerged macrophytes in the littoral zone (Potamogeton perfoliatus in Lake Peipsi and P. perfoliatus and Myriopyllum spicatum in Lake Võrtsjärv) and of their epiphytes was measured using a modified ¹⁴C method. The total PP of the submerged macrophyte area was similar in both lakes: 12.4 g C m⁻² day⁻¹ in Peipsi and 12.0 g C m⁻² day⁻¹ in Võrtsjärv. In Peipsi, 84.2% of this production was accounted for by macrophytes, while the shares of phytoplankton and epiphytes were low (15.6 and 0.16%, respectively). In Võrtsjärv, macrophytes contributed 58%, phytoplankton 41.9% and epiphytes 0.1% of the PP in the submerged macrophyte area. Epiphyte production in both lakes was very low in comparison with that of phytoplankton and macrophytes: 0.01, 5.04, and 6.97 g C m⁻² day⁻¹, respectively, in Võrtsjärv, and 0.02, 1.93, and 10.5 g C m⁻² day⁻¹, respectively, in Peipsi. The PP of the littoral area contributed 10% of the total summer PP of Lake Peipsi sensu stricto and 35.5% of the total summer PP of Lake Võrtsjärv.

The hydrochemical regime and the biota in two lakes of Vooremaa landscape protection area, Central Estonia, were studied in 2000-2001 within the frames of the EC project ECOFRAME aimed to work out water quality criteria for shallow lakes in Europe. Lake Prossa is a macrophyte-dominated lake with an area of 33 ha and a mean depth of 2.2 m. Most of the bottom in this lake is covered by a thick mat of charophytes all the year round. Lake Kaiavere located at a distance of 10 km from the former is a much larger (250 ha, mean depth 2.8 m) plankton-dominated lake. Despite the different area and the Chara meadows in Lake Prossa, the nutrient dynamics were very similar in both lakes. The first vernal phytoplankton peak was expressed in reduced Secchi depth in both lakes. After that peak, the water became clear in L. Prossa but remained turbid in Lake Kaiavere. In the Chara-lake the mean individual weight of zooplankton reached its maximum in both years in June. In the year 2000 it coincided with the peak of the zooplankton/phytoplankton ratio and with the minimum of soluble reactive phosphorus both contributing to the initiation of the clear-water period. Towards autumn, the individual mean weight of zooplankton decreased in the Chara-lake and remained smaller than in the plankton-dominated lake. Hence, zooplankton grazing could initiate the clear-water phase in the Chara-lake but other factors were needed for its maintenance. Another parameter that showed a clear difference between these two lakes was the carbonate alkalinity. It was rather stable or even increasing during spring in the plankton-dominated lake, while it decreased by nearly 50% between April and July in the Chara-lake. The calculated saturation level of calcite remained still lower in the Chara-lake showing that the co-precipitation of algae with autochthonous calcite could not explain the observed increase in water transparency above Chara meadows. The reduced sediment resuspension and the possible allelopathic influence of charophytes on phytoplankton remain the main explanations for the maitenance of the extensive clear-water period in the Chara-lake.