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5 result(s) for "Fias, Stijn"
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Chemical transferability of functional groups follows from the nearsightedness of electronic matter
We establish the physical origins of chemical transferability from the perspective of the nearsightedness of electronic matter. To do this, we explicitly evaluate the response of electron density to a change in the system, at constant chemical potential, by computing the softness kernel, s(r, r′). The softness kernel is nearsighted, indicating that under constant-chemical-potential conditions like dilute solutions changing the composition of the molecule at r has only local effects and does not have any significant impact on the reactivity at positions r′ far away from point r. This locality principle elucidates the transferability of functional groups in chemistry.
The close relation between cyclic delocalization, energy effects of cycles and aromaticity
New evidence questioning the multidimensionality of the aromaticity phenomenon exemplified in what is called orthogonality between the classical (structural and energetic) and magnetic aromaticity indices and measures is reported. For this purpose, the recently proposed methodologies for the quantitative characterization of the energy benefits associated with the cyclic arrangement of mobile π-electrons in polycyclic aromatic hydrocarbons are compared with the indices characterizing the extent of cyclic delocalization in the corresponding conjugated circuits. The reported close correlation between both types of indices implies that no discrepancies between classical and magnetic aromaticity measures exist provided the comparison is based on the indices of inherently local nature and/or the interfering contributions of contaminating conjugated circuits is properly taken into account in the description of aromaticity measures like topological resonance energy (TRE) or nucleus independent chemical shift (NICS).
Alchemical normal modes unify chemical space
In silico design of new molecules and materials with desirable quantum properties by high-throughput screening is a major challenge due to the high dimensionality of chemical space. To facilitate its navigation, we present a unification of coordinate and composition space in terms of alchemical normal modes (ANMs) which result from second order perturbation theory. ANMs assume a predominantly smooth nature of chemical space and form a basis in which new compounds can be expanded and identified. We showcase the use of ANMs for the energetics of the iso-electronic series of diatomics with 14 electrons, BN doped benzene derivatives (C\\(_{6-2x}\\)(BN)\\(_{x}\\)H\\(_6\\) with \\(x = 0, 1, 2, 3\\)), predictions for over 1.8 million BN doped coronene derivatives, and genetic energy optimizations in the entire BN doped coronene space. Using Ge lattice scans as reference, the applicability ANMs across the periodic table is demonstrated for III-V and IV-IV-semiconductors Si, Sn, SiGe, SnGe, SiSn, as well as AlP, AlAs, AlSb, GaP, GaAs, GaSb, InP, InAs, and InSb. Analysis of our results indicates simple qualitative structure property rules for estimating energetic rankings among isomers. Useful quantitative estimates can also be obtained when few atoms are changed to neighboring or lower lying elements in the periodic table. The quality of the predictions often increases with the symmetry of system chosen as reference due to cancellation of odd order terms. Rooted in perturbation theory the ANM approach promises to generally enable unbiased compound exploration campaigns at reduced computational cost.
Fast and accurate predictions of covalent bonds in chemical space
We assess the predictive accuracy of perturbation theory based estimates of changes in covalent bonding due to linear alchemical interpolations among molecules. We have investigated \\(\\sigma\\) bonding to hydrogen, as well as \\(\\sigma\\) and \\(\\pi\\) bonding between main-group elements, occurring in small sets of iso-valence-electronic molecular species with elements drawn from second to fourth rows in the \\(p\\)-block of the periodic table. Numerical evidence suggests that first order estimates of covalent bonding potentials can achieve chemical accuracy if (i) the alchemical interpolation is vertical (fixed geometry), (ii) involves molecules containing elements in the third and fourth row of the periodic table, and (iii) a reference geometry is optimized. In this case, changes in the bonding potential become near-linear in coupling parameter, resulting in analytical predictions with very high accuracy (\\(\\sim\\)1 kcal/mol). Second order estimates deteriorate the prediction. If initial and final molecules differ not only in composition but also in geometry, all estimates become substantially worse, with second order being slightly more accurate than first order. The independent particle approximation to the second order perturbation performs poorly when compared to the coupled perturbed or finite difference approach. Taylor series expansions up to fourth order of the potential energy curve of highly symmetric systems indicate a finite radius of convergence, as illustrated for the alchemical stretching of H\\(_2^+\\). Numerical results are presented for covalent bonds to hydrogen in 12 molecules with 8 valence electrons; (ii) main-group single bonds in 9 molecules with 14 valence electrons; (iii) main-group double bonds in 9 molecules with 12 valence electrons; (iv) main-group triple bonds in 9 molecules with 10 valence electrons; (v) H\\(_2^+\\) single bond with 1 electron.