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Seagrasses are important marine ecosystems situated throughout the world’s coastlines. They are facing declines around the world due to global and local threats such as rising ocean temperatures, coastal development and pollution from sewage outfalls and agriculture. Efforts have been made to reduce seagrass loss through reducing local and regional stressors, and through active restoration. Seagrass restoration is rapidly maturing but improved restoration practices are needed to enhance the success of future programs. Major gaps in knowledge remain, especially our understanding of how to restore tropical species in Australia. Prior research efforts have provided valuable insights into factors influencing the outcomes of restoration and there are now several examples of successful large-scale restoration programs. A variety of tools and techniques have recently been developed that will improve the efficiency, cost effectiveness, and scalability of restoration programs. This review describes emerging techniques for restoration, key considerations for future programs, and highlights the benefits of increased collaboration, Traditional Owner (First Nation) and stakeholder engagement. Combined, these lessons and emerging approaches show that seagrass restoration is possible and efforts should be directed at upscaling seagrass restoration into the future. This is critical for the future conservation of this important ecosystem and the ecological and coastal communities they support.

We identify how ecosystem functioning in shallow estuaries is affected by shifts in benthic fauna communities. We use the shallow estuary, Odense Fjord, Denmark, as a case study to test our hypotheses that (1) shifts in benthic fauna composition and species functional traits affect biogeochemical cycling with cascading effects on ecological functioning, which may (2) modulate pelagic primary productivity with feedbacks to the benthic system. Odense Fjord is suitable because it experienced dramatic shifts in benthic fauna community structure from 1998 to 2008. We focused on infaunal species with emphasis on three dominating burrow-dwelling polychaetes: the native Nereis (Hediste) diversicolor and Arenicola marina, and the invasive Marenzelleria viridis. The impact of functional traits in the form of particle reworking and ventilation on biogeochemical cycles, i.e. sediment metabolism and nutrient dynamics, was determined from literature data. Historical records of summer nutrient levels in the water column of the inner Odense Fjord show elevated concentrations of NH4+ and NO3- (DIN) during the years 2004-2006, exactly when the N. diversicolor population declined and A. marina and M. viridis populations expanded dramatically. In support of our first hypothesis, we show that excess NH4+ delivery from the benthic system during the A. marina and M. viridis expansion period enriched the overlying water in DIN and stimulated phytoplankton concentration. The altered benthic-pelagic coupling and stimulated pelagic production may, in support of our second hypothesis, have feedback to the benthic system by changing the deposition of organic material. We therefore advice to identify the exact functional traits of the species involved in a community shift before studying its impact on ecosystem functioning. We also suggest studying benthic community shifts in shallow environments to obtain knowledge about the drivers and controls before exploring deep-water environments.

The global seagrass decline has prompted numerous restoration efforts to reverse current trends. Yet, restoration efforts are challenged by ecological feedbacks and prevalent stressors. Identifying these stressors and the thresholds where seagrass shoot production becomes negative is vital to improve site-selection procedures and increase restoration success. In this study, we investigated the ecological compensation irradiance (ECI) and depth limit of eelgrass ( Zostera marina L) transplants along a eutrophication gradient. This was accomplished by establishing eelgrass transplants along eutrophication and depth gradients while continuously measuring benthic Photosynthetically Active Radiation (PAR). High-temporal monitoring of shoot count allowed precise estimates of shoot production, which was applied to modified photosynthesis-irradiance curves, thereby estimating the ECI. The ECI fell within the interval 2.6 – 9.8 E m -2 d -1 and responded distinctly along the eutrophication gradient, decreasing as eutrophication and nutrient-derived stressors were alleviated. The depth limits were concurrently controlled by irradiance and ECI and similarly responded along the eutrophication gradient, increasing from 1.1 m at the innermost station to 4.7 – 5.6 m at the two outermost least eutrophic stations. The results demonstrate that the ECI of eelgrass varies according to the local environment, with implications for habitat suitability assessment and site selection procedures in restoration efforts.

Intergovernmental Panel on Climate Change (IPCC) scenarios run by an ensemble of models developed by the Coupled Model Intercomparison Project (CMIP) projects an average sea level rise (SLRs) of 0.6 to 1.2 m for the low and high emission scenarios (SSP1-1.9, SSP5-8.5), during the next century (IPCC 2021). The coastal zone will experience an increase in the flooding of terrestrial habitats and the depth of marine productive areas, with potential negative consequences for these ecosystems. The coast in Denmark is highly modified due to anthropogenic uses. Dikes, dams, and other coastal infrastructure are widespread, causing a coastal squeeze that prevents natural coastal development and inland migration of coastlines. We performed a national-scale analysis on the impacts of mean sea level rise (MSLR) in 2070 and 2120, and a 1 in 10-year storm surge water level (10SS) in 2120 MSLR for the Danish coast. Our study shows extensive permanent flooding of coastal habitats (~14%), whereas only 1.6% of urban areas will be flooded. Finally, very large agricultural areas (~191,000 ha) will be frequently flooded by 10SS if no extra protective measures are planned. With the present coastal protection structures, key habitats will be affected by permanent flooding or coastal squeeze while even larger extents will be subjected to intermittent marine flooding. About 45% (199 km 2 ) of all Danish coastal wetlands will be permanently flooded by 2120, while areas occupied by forest, lakes and freshwater wetlands will be more frequently flooded by marine water. This study highlights the importance of including coastal habitats as dynamic elements in climate adaptation plans. Conservation and restoration of key habitats such as coastal wetlands should be prioritized in management plans. If Denmark does not change its current priorities, it may face the complete loss of coastal wetlands habitat in the 22nd century.

Climate-driven sea level rise has severe consequences for drained agricultural areas near coasts. The least productive of these can be restored into marine wetlands of high ecological quality by managed realignment. This study assessed the nitrogen (N) and phosphorus (P) balance in a 214 ha coastal lagoon formed after flooding of agricultural land by managed realignment. N and P loss from the soils was monitored over a 5-year period after flooding using three independent approaches: (1) temporal changes in N and P inventories of the soil; (2) flux of dissolved inorganic N and P from the flooded soil; and (3) tidal N and P exchange across the outer boundary in the form of particulate and dissolved nutrients. All three approaches showed similar initial release and tidal export of N and P the first year (s) after flooding followed by decreasing rates. The annual loss ranged from 157 to 299 kg N ha⁻¹ yr⁻¹ and 29 to 63 kg P ha⁻¹ yr⁻¹ during the first year. N loss decreased rapidly after the first 2 years and reached a level of 28–65 kg N ha⁻¹ yr⁻¹, while P loss declined after the first year and remained stable and relatively high at 18–32 kg P ha⁻¹ yr⁻¹ thereafter. High N and P export after implementing managed realignment of agricultural land may deteriorate environmental conditions in the adjacent marine recipients for at least 5 years. Particularly small and stagnant water bodies vulnerable to eutrophication should be avoided as recipients.

The accelerated global losses of seagrass meadows makes restoration increasingly important. This restoration study was conducted in a shallow Danish estuary and describes one of the rare examples of successful large-scale eelgrass Zostera marina restoration outside North America. A simplified 3-step site selection approach was successfully applied to locate an optimal site for large-scale transplantation. It consisted of (1) qualitative assessments of vegetation using aerial photos, (2) inspection of potential sites with assessments of stressor presence and potential growth conditions and (3) transplantation tests for a final assessment of site suitability and methodology. The large-scale transplantation was initiated at the test site with the highest shoot production. After transplantation, shoot densities developed rapidly, achieving a 70-fold increase in density after about 2 yr. A rapid edge expansion (0.32 m yr−1) of the transplanted area was detected using drone-based monitoring. Both the final shoot density and edge expansion were comparable to those of natural eelgrass patches in the estuary. Eelgrass-transplanted areas accumulated more fine sediment particles and organic C, N and P than adjacent unvegetated sediment. Burial of organic C, N and P in eelgrass-transplanted sediments was 33 ± 7.5, 6.6 ± 0.9 and 3.0 ± 0.5 g m−2 yr−1, respectively (mean ± SE). In addition, inorganic C and N were assimilated by eelgrass transplants at rates of 290 ± 22 and 12 ± 1.0 g m−2 yr−1, respectively. The results highlight that important ecosystem services are already restored 2 yr after successful eelgrass restoration.

Eutrophication is a key driver in the loss of marine ecosystems, and seagrass meadows are among the many ecosystems which have declined globally during the last decades. Seagrass restoration is being used worldwide in coastal areas to counteract the decline in areal extent and to promote biodiversity. This study assesses the spatial and temporal changes in benthic fauna composition after a successful large-scale eelgrass (Zostera marina) transplantation in Horsens Fjord, Denmark. Transplantation was done by anchoring individual shoots in the sediment. Subsequently, benthic fauna was compared among bare bottom (BB), transplanted eelgrass (TE) and a natural eelgrass (NE) meadow in Horsens Fjord. Species richness (S), abundance (N), Shannon- Wiener index (H’), Pielou’s evenness (J’) and biomass (B) of benthic fauna were significantly higher at TE and NE than at BB. S, H’ and J’ were not different between TE and NE, but N and B were. Furthermore, S, N and B showed significant year-to-year variation, with the highest values occurring the same year as peak eelgrass biomass at both TE and NE, and S, N and H’ correlated positively with dry eelgrass biomass. Increases in community parameters were achieved at TE at least 1 yr 2 mo after transplantation, and a higher diversity of feeding groups was found. However, the ecological status of fauna at TE was in a transition state towards that at NE, according to the Water Framework Directive. The fast succession of benthic fauna proved that successful largescale transplantation of eelgrass can restore fauna communities very quickly.

Sediments in eutrophic estuarine ecosystems may become heavily enriched with organic carbon (OC). This OC is primarily of low reactivity and, therefore, has moderate effects on sediment biogeochemical cycling. Nonetheless, OC levels of >1% reduce sediment stability and cause frequent resuspensions and high water turbidity, which affect the recovery of ecosystem functioning. Significant reduction of sediment OC content to <1% is, therefore, needed before ecosystems can fully recover. It was investigated whether organic-rich sediments with 2.5 to 4.4% OC (180–310 mol m−2) from the eutrophic Odense Fjord (Denmark) can recover by microbial degradation. Defaunated sediment cores from various habitats were subjected to long-term (~2 yr) degradation experiments. Total OC content was measured initially and OC degradation was measured regularly from CO₂ effluxes and closed anoxic sediment incubations. OC degradation was high initially, but faded exponentially at all stations before stabilizing at 6 to 15 mmol OC m−2 d−1 after 100 to 150 d. Hence, over the 2 yr experiment OC degradation corresponded to only 3 to 5% reduction of initial OC. Temporal degradation patterns analyzed by exponential decay models suggested that sedimentary OC consisted of 2 pools with different reactivity plus a non-reactive pool. OC with the highest turnover (k = 0.5 × 10−2 to 5.5 × 10−2 d−1) was quantitatively the least important (0.3−4.3% of total OC), while OC with lower reactivity (k = 0.1 × 10−3 to 2.0 × 10−3 d−1) constituted a higher proportion (4−58% of total OC in organic-rich sediments). Furthermore, 43 to 95% of sediment OC was non-degradable. Our results suggest that partial recovery (5−57% reduction of initial OC) may occur within 23 to 50 yr. However, complete recovery of organic-rich sediments to <1% OC seems unlikely due to large pools of non-reactive OC. Eutrophication, therefore, leads to irreversible OC accumulation in sediments, which prolongs the recovery time for estuarine ecosystems after reductions in nutrient loading.

Temporal and spatial variations in benthic metabolism and anaerobic carbon oxidation pathways were assessed in an anthropogenically impacted (Mtoni) and a pristine (Ras Dege) mangrove forest in Tanzania. The objectives were (1) to evaluate how benthic metabolism is affected by organic carbon availability; (2) to determine the validity of diffusive release of CO₂ as a measure benthic carbon oxidation; and (3) to assess the partitioning of anaerobic carbon pathways and factors controlling the availability of electron acceptors (e.g. oxidized iron). Microbial carbon oxidation measured as diffusive exchange of O₂ and CO₂ (32-67 and 28-115 mmol m⁻² day⁻¹, respectively) showed no specific temporal patterns. Low intertidal sediments at Mtoni fed by labile algal carbon of anthropogenic origin had higher diffusive CO₂ release than high intertidal sediments that primarily received less reactive mangrove detritus. Diffusive release of CO₂ apparently underestimated total sediment carbon oxidation due to CO₂ loss from deep sediments via emission through biogenic structures (i.e. crab burrows and pneumatophores) and porewater seepage into creeks. We propose that diffusive fluxes in the present mangrove sediments are roughly equivalent to depth-integrated reactions occurring in the upper 12 cm. Anaerobic carbon oxidation was dominated by FeR irrespective of anthropogenic influence in sediments where the oxidizing effects of biogenic structures increased the Fe(III) level. More than 80% of the anaerobic carbon oxidation in Mtoni and Ras Dege sediments was due to FeR when reactive Fe(III) exceeded 30 μmol cm⁻³. The anthropogenic influence at Mtoni was primarily noted as up to one order of magnitude higher denitrification than at Ras Dege, but this process always accounted for less than 1% of total carbon oxidation. It is noteworthy that organic and nutrient enrichment of anthropogenic origin in Mtoni has no measurable effect on microbial processes, other than carbon oxidation in the low intertidal area and denitrification throughout the forest, and indicates a strong resilience of mangrove environments towards disturbances.

Managed realignment by deliberate flooding of coastal areas is an adaptation to sea level rise but may risk enriching the coastal zone with nutrients when seawater floods agricultural soil. This study focuses on the early development of macroalgae and their sources of nitrogen (N) in Gyldensteen Coastal Lagoon, Denmark. The lagoon was claimed for agricultural purposes in 1871 and reflooded by managed realignment 143 yr later (2014). Our hypotheses were: (1) that nutrients of agricultural origin from the newly flooded soil initiate opportunistic macroalgal blooms; and (2) that the isotopic composition of green algae rapidly reflects the origin of nutrient sources. We monitored macroalgal cover and conducted stable isotope (δ 15N) analyses to assess the origin of N sources. Intense green macroalgal blooms occurred during the first summer after flooding and diminished in the 2 following years as a result of rapid water exchange. Low δ 15N in macroalgae in the first year (mean ± SE, 4.2 ± 0.3‰) increased significantly in the next year (8.0 ± 0.1‰). A laboratory experiment tested the δ 15N response of opportunistic green macroalgae (Ulva spp.) exposed to organic manure and synthetic inorganic fertilizers. Higher δ 15N (11.1 ± 0.1‰) characterized manure-treated algae compared to fertilizer-treated algae (2.7 ± 0.2‰). Based on these field and laboratory results, we accept both hypotheses and conclude that the major N source supporting macroalgal growth in 2014 was derived from synthetic fertilizers; however, rapid tidal flushing during the following years resulted in nutrient limitation and lower macroalgal growth.