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result(s) for
"Fontecha, Gustavo"
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Genomic exploration of the journey of Plasmodium vivax in Latin America
by
Lefebvre, Margaux J. M.
,
Rougeron, Virginie
,
Houzé, Sandrine
in
Bacteriology
,
Bayesian analysis
,
Biology and Life Sciences
2025
Plasmodium vivax is the predominant malaria parasite in Latin America. Its colonization history in the region is rich and complex, and is still highly debated, especially about its origin(s). Our study employed cutting-edge population genomic techniques to analyze whole genome variation from 620 P . vivax isolates, including 107 newly sequenced samples from West Africa, Middle East, and Latin America. This sampling represents nearly all potential source populations worldwide currently available. Analyses of the genetic structure, diversity, ancestry, coalescent-based inferences, including demographic scenario testing using Approximate Bayesian Computation, have revealed a more complex evolutionary history than previously envisioned. Indeed, our analyses suggest that the current American P . vivax populations predominantly stemmed from a now-extinct European lineage, with the potential contribution also from unsampled populations, most likely of West African origin. We also found evidence that P . vivax arrived in Latin America in multiple waves, initially during early European contact and later through post-colonial human migration waves in the late 19 th -century. This study provides a fresh perspective on P . vivax ’s intricate evolutionary journey and brings insights into the possible contribution of West African P . vivax populations to the colonization history of Latin America.
Journal Article
PET-PCR reveals low parasitaemia and submicroscopic malarial infections in Honduran Moskitia
by
Grimaldi, Nicole
,
Pinto, Alejandra
,
Juárez-Fontecha, Gabriel
in
Asymptomatic
,
Biomedical and Life Sciences
,
Biomedicine
2023
Background
Malaria remains a main parasitic disease of humans. Although the largest number of cases is reported in the African region, there are still endemic foci in the Americas. Central America reported 36,000 malaria cases in 2020, which represents 5.5% of cases in the Americas and 0.015% of cases globally. Most malaria infections in Central America are reported in La Moskitia, shared by Honduras and Nicaragua. In the Honduran Moskitia, less than 800 cases were registered in 2020, considering it an area of low endemicity. In low endemicity settings, the number of submicroscopic and asymptomatic infections tends to increase, leaving many cases undetected and untreated. These reservoirs challenge national malaria elimination programmes. This study aimed to assess the diagnostic performance of Light Microscopy (LM), a nested PCR test and a photoinduced electron transfer polymerase chain reaction (PET-PCR) in a population of febrile patients from La Moskitia.
Methods
A total of 309 febrile participants were recruited using a passive surveillance approach at the Puerto Lempira hospital. Blood samples were analysed by LM, nested PCR, and PET-PCR. Diagnostic performance including sensitivity, specificity, negative and positive predictive values, kappa index, accuracy, and ROC analysis was evaluated. The parasitaemia of the positive samples was quantified by both LM and PET-PCR.
Results
The overall prevalence of malaria was 19.1% by LM, 27.8% by nPCR, and 31.1% by PET-PCR. The sensitivity of LM was 67.4% compared to nPCR, and the sensitivity of LM and nPCR was 59.6% and 80.8%, respectively, compared to PET-PCR. LM showed a kappa index of 0.67, with a moderate level of agreement. Forty positive cases by PET-PCR were not detected by LM.
Conclusions
This study demonstrated that LM is unable to detect parasitaemia at low levels and that there is a high degree of submicroscopic infections in the Honduran Moskitia.
Journal Article
PCR–RFLP assays for the identification of Anopheles (Diptera: Culicidae) species circulating in Honduras
2023
Background
Vector populations are a key target for malaria control and elimination. In Honduras, there are at least 12 reported anopheline species, however, the definitive number of species remains uncertain. Due to the inherent limitations of morphological identification of
Anopheles
species, molecular approaches have been developed to provide accurate identification and robust surveillance of local malaria vectors. The aim of this study was to design and assess three PCR–RFLP assays to identify anopheline species known to presently occur in Honduras.
Methods
Mosquitoes captured between 2018 and 2022 in seven malaria-endemic and non-endemic departments in Honduras were analysed. The ITS2 ribosomal region and three restriction enzyme-based assays were evaluated in silico and experimentally.
Results
A total of 132 sequences from 12 anopheline species were analysed. The ITS2 marker showed length polymorphisms that generated products between 388 and 592 bp and no relevant intraspecies polymorphisms were found. Furthermore, the three PCR–RFLP assays were able to differentiate 11 species with sufficient precision and resolution.
Conclusion
The ITS2 region was shown to be a useful molecular marker for identifying local
Anopheles
species. In addition, the PCR–RFLP assays evaluated here proved to be capable of discriminating most of the anopheline species present in Honduras. These methods provide alternatives to improve entomological surveillance of
Anopheles
in Honduras and other Mesoamerican countries.
Journal Article
Genetic Diversity among Four Populations of Aedes aegypti (Diptera: Culicidae) from Honduras as Revealed by Mitochondrial DNA Cytochrome Oxidase I
by
Urrutia, Oscar
,
Escobar, Denis
,
Ortiz, Bryan
in
15th century
,
Aedes aegypti
,
Anthropogenic factors
2022
Aedes aegypti is a hematophagous and highly anthropophilic mosquito with a wide distribution, particularly in tropical and subtropical regions of the world. Ae. aegypti is the main vector of several febrile diseases called arboviruses (dengue, yellow fever, chikungunya, and zika viruses), which represent an important public health problem. Populations of this mosquito were nearly eliminated from the Americas in the mid-20th century; however, after the abandonment of control measures, mosquito populations have been recovering territory, have expanded by anthropogenic mechanisms, and have been joined by new populations reintroduced from other continents. The objective of this pilot study was to determine the genetic variability of Aedes aegypti collected in four cities located along the so-called logistics corridor of Honduras, which connects the Caribbean Sea to the Pacific Ocean. We studied the sequences of two molecular markers: the cytochrome c oxidase 1 (COI mtDNA) gene and the internal transcribed spacer 2 (ITS2 rDNA) of 40 mosquitoes. Phylogenetic analyzes show two separate clades with a low number of nucleotide differences per site, three haplotypes, and low haplotype diversity. These results suggest a low genetic diversity in the populations of Ae. aegypti in Honduras in relation to that reported in other countries of the Central American isthmus.
Journal Article
Publication Trends in Neglected Tropical Diseases of Latin America and the Caribbean: A Bibliometric Analysis
by
Ortiz, Bryan
,
Fontecha, Gustavo
,
Sánchez, Ana
in
Acquired immune deficiency syndrome
,
AIDS
,
bibliometric analysis
2021
(1) Background: Neglected tropical diseases (NTDs) have been overlooked on the global health agenda and in the priorities of national systems in low- and middle-income countries (LMICs). In 2012, the Sustainable Development Goals (SDGs) were created to ensure healthy lives and promoting well-being for all. This roadmap set out to accelerate work to overcome the global impact of NTDs. Almost a decade has passed since NTDs were re-launched as a global priority. Investment in research and development, as well as the production of scientific literature on NTDs, is expected to have increased significantly. (2) Methods: A bibliometric analysis of the scientific production of Latin America and the Caribbean (LAC) was carried out in relation to 19 endemic NTDs. These data were compared with the scientific production in malaria, tuberculosis, and HIV/AIDS. The database available from Thomson Reuters Web of Science (WoS) was used. In addition, the average annual growth percentage was calculated for each disease. (3) Results: In the last decade, the NTDs with the highest number of publications in the world were dengue and leishmaniasis. The United States was the most prolific country in the world in 15 out of 19 NTDs analyzed. In the LAC region, Brazil was the largest contributor for 16 of the 19 NTDs analyzed. Arboviral diseases showed the highest average annual growth. The number of publications for malaria, tuberculosis and HIV/AIDS was considerably higher than for NTDs. The contribution of most LAC countries, especially those considered to be LMICs, is inadequate and does not reflect the relevance of NTDs for the public health of the population. (4) Conclusions: This is the first bibliometric analysis to assess the trend of scientific documents on endemic NTDs in LAC. Our results could be used by decision makers both to strengthen investment policies in research and development in NTDs.
Journal Article
Insecticide resistance status and high frequency of kdr mutations in Aedes aegypti in Tegucigalpa, Honduras
by
Urrutia, Oscar
,
Reyes-Perdomo, Cindy
,
Escobar, Denis
in
Aedes - drug effects
,
Aedes - genetics
,
Aedes aegypti
2025
Background
Aedes aegypti
is the main vector of arboviruses in the Americas. Insecticide use remains the primary method for outbreak control, but prolonged application exerts selective pressure that promotes resistance. This study aimed to assess insecticide resistance and characterize key knockdown resistance (
kdr
) mutations in
Ae. aegypti
populations from the Central District of Honduras.
Methods
Larvae were collected from four localities between May and June 2023. Susceptibility to four insecticides was evaluated via bioassays. Frequencies of the F1534C and V1016I
kdr
alleles and their haplotypes were determined, and sequencing of the
vgsc
gene was performed for further genotyping.
Results
A total of 1592
Ae. aegypti
females were phenotyped. All populations were resistant to permethrin and malathion, and two were resistant to deltamethrin; all were susceptible to bendiocarb. The 1534C mutant allele was fixed (1.0), and 1016I had an overall frequency of 0.89, with local variation from 0.48 to 1.0.
Conclusions
Widespread resistance to commonly used insecticides was detected in
Ae. aegypti
from the Central District. High frequencies of
kdr
mutations underscore the need for continuous resistance monitoring to guide effective vector control strategies in Honduras.
Graphical abstract
Journal Article
Teaching about dermatophytosis in the era of antifungal resistance: design, implementation, and evaluation of a multidisciplinary workshop in Honduras
by
Lopez, Greisi
,
Elvir, Sara
,
Ortiz, Bryan
in
Active Learning
,
Antifungal Agents - therapeutic use
,
Antifungal resistance, Trichophyton indotineae
2026
Background
The global increase in fungal infections and the emergence of antifungal-resistant species, particularly
Trichophyton indotineae
, have exposed critical gaps in medical mycology training and diagnostic capacity, especially in low- and middle-income countries. Despite their high prevalence, dermatophytoses are underrepresented in health sciences curricula and continuing professional education, contributing to misdiagnosis, delayed treatment, and inappropriate antifungal use.
Methods
We designed, implemented, and evaluated a multidisciplinary educational workshop entitled “Medical Mycology: Dermatophytoses, New Challenges in the Era of Antifungal Resistance”, conducted in Honduras in September 2025. The 24-hour in-person intervention combined 16 h of theoretical instruction with 8 h of hands-on laboratory training and targeted healthcare professionals and laboratory personnel nationwide. Educational impact was assessed using pre- and post-intervention questionnaires evaluating knowledge on dermatophyte taxonomy, identification methods, epidemiology, and antifungal resistance. Additionally, a structured survey was applied to characterize participants’ institutional diagnostic capacities. Descriptive analyses were performed to compare pre- and post-workshop responses.
Results
Among the 36 participants who completed both assessments, post-workshop results demonstrated substantial learning gains across all evaluated domains. The largest improvements were observed in recognition of recently revised dermatophyte genera and in understanding the transmission, clinical relevance, and terbinafine resistance mechanisms of
T. indotineae
. Correct response rates increased to near 100% for most items. The diagnostic capacity survey revealed that diagnostic practices in participating institutions are predominantly based on phenotypic methods, characterized by reliance on direct microscopy and culture, the exclusive use of morphological identification, and the absence of molecular methods, antifungal susceptibility testing, and MALDI-TOF mass spectrometry. The workshop also facilitated the development of standardized didactic materials and the establishment of a preliminary national network for future molecular surveillance.
Conclusions
This experience demonstrates that a structured, evidence-based educational intervention can significantly strengthen knowledge and practical skills in medical mycology. Such initiatives represent a scalable model to improve dermatophyte diagnosis and antifungal resistance awareness in resource-limited settings.
Journal Article
A decade of health research capacity building in Honduras: institutional transformation, challenges, and lessons learned
by
Matamoros, Gabriela
,
Escobar, Denis
,
Ortiz, Bryan
in
Annual reports
,
Bibliometrics
,
Biomedical research
2025
Honduras has historically faced major barriers to building a sustainable health research system, including minimal R&D investment and limited institutional infrastructure. A Canadian-funded initiative (2007-2012) established the first research-oriented MSc program, a non-clinical ethics board, and modern laboratories at the
(UNAH).
This article examines how health research capacity evolved between 2013 and 2025, highlighting long-term outcomes, enablers, and barriers, and situating these within a regional Central American comparison. The narrative, largely anecdotal, reflects on the experience and impact of biomedical research at UNAH, particularly through the
(IIM).
Alumni trajectories and institutional transformations are illustrated with concrete examples. Bibliometric analysis contextualizes scientific output, complemented by broader indicators (GDP, R&D investment, tertiary education, PhDs per million) from World Bank sources.
More than 30 MSc graduates have strengthened biomedical and public health institutions, with several completing doctoral training abroad and returning to Honduras. Since its formal creation in 2014, the IIM has produced over 170 publications, representing more than 20% of UNAH's health-related output since 2012. Challenges to sustainability include chronic underinvestment (< 0.1% GDP in R&D), rigid bureaucracy, limited career pathways, and brain drain. Enablers have been international partnerships, the academic diaspora, and strong local leadership.
The Honduran case illustrates how targeted, multi-level investment in individuals, institutions, and governance can foster long-term research capacity in resource-constrained settings, while underscoring the need for national policies, career structures, private sector engagement, and sustained international collaboration.
Journal Article
Distribution and phylogenetic diversity of Anopheles species in malaria endemic areas of Honduras in an elimination setting
2020
Background
Anopheles
mosquitoes are the vectors of malaria, one of the most important infectious diseases in the tropics. More than 500
Anopheles
species have been described worldwide, and more than 30 are considered a public health problem. In Honduras, information on the distribution of
Anopheles
spp. and its genetic diversity is scarce. This study aimed to describe the distribution and genetic diversity of
Anopheles
mosquitoes in Honduras.
Methods
Mosquitoes were captured in 8 locations in 5 malaria endemic departments during 2019. Two collection methods were used. Adult anophelines were captured outdoors using CDC light traps and by aspiration of mosquitoes at rest. Morphological identification was performed using taxonomic keys. Genetic analyses included the sequencing of a partial region of the cytochrome
c
oxidase 1 gene (
cox
1) and the ribosomal internal transcribed spacer 2 (ITS2).
Results
A total of 1320 anophelines were collected and identified through morphological keys. Seven
Anopheles
species were identified.
Anopheles albimanus
was the most widespread and abundant species (74.02%). To confirm the morphological identification of the specimens, 175 and 122 sequences were obtained for
cox
1 and ITS2, respectively. Both markers confirmed the morphological identification.
cox
1 showed a greater nucleotide diversity than ITS2 in all species. High genetic diversity was observed within the populations of
An. albimanus
while
An. darlingi
proved to be a highly homogeneous population. Phylogenetic analyses revealed clustering patterns in
An. darlingi
and
An. neivai
in relation to specimens from South America. New sequences for
An. crucians
,
An. vestitipennis
and
An. neivai
are reported in this study.
Conclusions
Here we report the distribution and genetic diversity of
Anopheles
species in endemic areas of malaria transmission in Honduras. According to our results, both taxonomic and molecular approaches are useful tools in the identification of anopheline mosquitoes. However, both molecular markers differ in their ability to detect intraspecific genetic diversity. These results provide supporting data for a better understanding of the distribution of malaria vectors in Honduras.
Journal Article