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"Francois, Mark Steven"
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Substantial carbon drawdown potential from enhanced rock weathering in the United Kingdom
2022
Achieving national targets for net-zero carbon emissions will require atmospheric carbon dioxide removal strategies compatible with rising agricultural production. One possible method for delivering on these goals is enhanced rock weathering, which involves modifying soils with crushed silicate rocks, such as basalt. Here we use dynamic carbon budget modelling to assess the carbon dioxide removal potential and agricultural benefits of implementing enhanced rock weathering strategies across UK arable croplands. We find that enhanced rock weathering could deliver net carbon dioxide removal of 6–30 MtCO
2
yr
−
1
for the United Kingdom by 2050, representing up to 45% of the atmospheric carbon removal required nationally to meet net-zero emissions. This suggests that enhanced rock weathering could play a crucial role in national climate mitigation strategies if it were to gain acceptance across national political, local community and farm scales. We show that it is feasible to eliminate the energy-demanding requirement for milling rocks to fine particle sizes. Co-benefits of enhanced rock weathering include substantial mitigation of nitrous oxide, the third most important greenhouse gas, widespread reversal of soil acidification and considerable cost savings from reduced fertilizer usage. Our analyses provide a guide for other nations to pursue their carbon dioxide removal ambitions and decarbonize agriculture—a key source of greenhouse gases.
Enhancing rock weathering across UK croplands could deliver substantial atmospheric carbon dioxide removal alongside agricultural co-benefits, according to coupled climate–carbon–nitrogen cycle model simulations.
Journal Article
The Boston criteria version 2.0 for cerebral amyloid angiopathy: a multicentre, retrospective, MRI–neuropathology diagnostic accuracy study
by
Greenberg, Steven M
,
Casolla, Barbara
,
Brandner, Sebastian
in
Accuracy
,
Aged
,
Amyloid beta-Peptides
2022
Cerebral amyloid angiopathy (CAA) is an age-related small vessel disease, characterised pathologically by progressive deposition of amyloid β in the cerebrovascular wall. The Boston criteria are used worldwide for the in-vivo diagnosis of CAA but have not been updated since 2010, before the emergence of additional MRI markers. We report an international collaborative study aiming to update and externally validate the Boston diagnostic criteria across the full spectrum of clinical CAA presentations.
In this multicentre, hospital-based, retrospective, MRI and neuropathology diagnostic accuracy study, we did a retrospective analysis of clinical, radiological, and histopathological data available to sites participating in the International CAA Association to formulate updated Boston criteria and establish their diagnostic accuracy across different populations and clinical presentations. Ten North American and European academic medical centres identified patients aged 50 years and older with potential CAA-related clinical presentations (ie, spontaneous intracerebral haemorrhage, cognitive impairment, or transient focal neurological episodes), available brain MRI, and histopathological assessment for CAA diagnosis. MRI scans were centrally rated at Massachusetts General Hospital (Boston, MA, USA) for haemorrhagic and non-haemorrhagic CAA markers, and brain tissue samples were rated by neuropathologists at the contributing sites. We derived the Boston criteria version 2.0 (v2.0) by selecting MRI features to optimise diagnostic specificity and sensitivity in a prespecified derivation cohort (Boston cases 1994–2012, n=159), then externally validated the criteria in a prespecified temporal validation cohort (Boston cases 2012–18, n=59) and a geographical validation cohort (non-Boston cases 2004–18; n=123), comparing accuracy of the new criteria to the currently used modified Boston criteria with histopathological assessment of CAA as the diagnostic standard. We also assessed performance of the v2.0 criteria in patients across all cohorts who had the diagnostic gold standard of brain autopsy.
The study protocol was finalised on Jan 15, 2017, patient identification was completed on Dec 31, 2018, and imaging analyses were completed on Sept 30, 2019. Of 401 potentially eligible patients presenting to Massachusetts General Hospital, 218 were eligible to be included in the analysis; of 160 patient datasets from other centres, 123 were included. Using the derivation cohort, we derived provisional criteria for probable CAA requiring the presence of at least two strictly lobar haemorrhagic lesions (ie, intracerebral haemorrhages, cerebral microbleeds, or foci of cortical superficial siderosis) or at least one strictly lobar haemorrhagic lesion and at least one white matter characteristic (ie, severe visible perivascular spaces in centrum semiovale or white matter hyperintensities in a multispot pattern). The sensitivity and specificity of these criteria were 74·8% (95% CI 65·4–82·7) and 84·6% (71·9–93·1) in the derivation cohort, 92·5% (79·6–98·4) and 89·5% (66·9–98·7) in the temporal validation cohort, 80·2% (70·8–87·6) and 81·5% (61·9–93·7) in the geographical validation cohort, and 74·5% (65·4–82·4) and 95·0% (83·1–99·4) in all patients who had autopsy as the diagnostic standard. The area under the receiver operating characteristic curve (AUC) was 0·797 (0·732–0·861) in the derivation cohort, 0·910 (0·828–0·992) in the temporal validation cohort, 0·808 (0·724–0·893) in the geographical validation cohort, and 0·848 (0·794–0·901) in patients who had autopsy as the diagnostic standard. The v2.0 Boston criteria for probable CAA had superior accuracy to the current Boston criteria (sensitivity 64·5% [54·9–73·4]; specificity 95·0% [83·1–99·4]; AUC 0·798 [0·741–0854]; p=0·0005 for comparison of AUC) across all individuals who had autopsy as the diagnostic standard.
The Boston criteria v2.0 incorporate emerging MRI markers of CAA to enhance sensitivity without compromising their specificity in our cohorts of patients aged 50 years and older presenting with spontaneous intracerebral haemorrhage, cognitive impairment, or transient focal neurological episodes. Future studies will be needed to determine generalisability of the v.2.0 criteria across the full range of patients and clinical presentations.
US National Institutes of Health (R01 AG26484).
Journal Article
Potential for large-scale CO2 removal via enhanced rock weathering with croplands
by
Holden, Philip B.
,
Renforth, Phil
,
Mercure, Jean-Francois
in
704/106/694
,
704/47/4113
,
Acidification
2020
Enhanced silicate rock weathering (ERW), deployable with croplands, has potential use for atmospheric carbon dioxide (CO
2
) removal (CDR), which is now necessary to mitigate anthropogenic climate change
1
. ERW also has possible co-benefits for improved food and soil security, and reduced ocean acidification
2
–
4
. Here we use an integrated performance modelling approach to make an initial techno-economic assessment for 2050, quantifying how CDR potential and costs vary among nations in relation to business-as-usual energy policies and policies consistent with limiting future warming to 2 degrees Celsius
5
. China, India, the USA and Brazil have great potential to help achieve average global CDR goals of 0.5 to 2 gigatonnes of carbon dioxide (CO
2
) per year with extraction costs of approximately US$80–180 per tonne of CO
2
. These goals and costs are robust, regardless of future energy policies. Deployment within existing croplands offers opportunities to align agriculture and climate policy. However, success will depend upon overcoming political and social inertia to develop regulatory and incentive frameworks. We discuss the challenges and opportunities of ERW deployment, including the potential for excess industrial silicate materials (basalt mine overburden, concrete, and iron and steel slag) to obviate the need for new mining, as well as uncertainties in soil weathering rates and land–ocean transfer of weathered products.
A detailed assessment of the techno-economic potential of enhanced rock weathering on croplands identifies national CO
2
removal potentials, costs and engineering challenges if it were to be scaled up to help meet ambitious global CO
2
removal targets.
Journal Article
High-throughput measurement of single-cell growth rates using serial microfluidic mass sensor arrays
2016
Heterogeneity in growth phenotypes and drug susceptibility in bacterial and mammalian cells are assayed at the single-cell level using multiplexed resonant mass sensors.
Methods to rapidly assess cell growth would be useful for many applications, including drug susceptibility testing, but current technologies have limited sensitivity or throughput. Here we present an approach to precisely and rapidly measure growth rates of many individual cells simultaneously. We flow cells in suspension through a microfluidic channel with 10–12 resonant mass sensors distributed along its length, weighing each cell repeatedly over the 4–20 min it spends in the channel. Because multiple cells traverse the channel at the same time, we obtain growth rates for >60 cells/h with a resolution of 0.2 pg/h for mammalian cells and 0.02 pg/h for bacteria. We measure the growth of single lymphocytic cells, mouse and human T cells, primary human leukemia cells, yeast,
Escherichia coli
and
Enterococcus faecalis
. Our system reveals subpopulations of cells with divergent growth kinetics and enables assessment of cellular responses to antibiotics and antimicrobial peptides within minutes.
Journal Article
Transforming US agriculture for carbon removal with enhanced weathering
by
Holden, Philip B.
,
Renforth, Phil
,
Edwards, Neil R.
in
704/106/694/1108
,
704/47/4113
,
Aerosol concentrations
2025
Enhanced weathering (EW) with agriculture uses crushed silicate rocks to drive carbon dioxide removal (CDR)
1
,
2
. If widely adopted on farmlands, it could help achieve net-zero emissions by 2050
2
,
3
–
4
. Here we show, with a detailed US state-specific carbon cycle analysis constrained by resource provision, that EW deployed on agricultural land could sequester 0.16–0.30 GtCO
2
yr
−1
by 2050, rising to 0.25–0.49 GtCO
2
yr
−1
by 2070. Geochemical assessment of rivers and oceans suggests effective transport of dissolved products from EW from soils, offering CDR on intergenerational timescales. Our analysis further indicates that EW may temporarily help lower ground-level ozone and concentrations of secondary aerosols in agricultural regions. Geospatially mapped CDR costs show heterogeneity across the USA, reflecting a combination of cropland distance from basalt source regions, timing of EW deployment and evolving CDR rates. CDR costs are highest in the first two decades before declining to about US$100–150 tCO
2
−1
by 2050, including for states that contribute most to total national CDR. Although EW cannot be a substitute for emission reductions, our assessment strengthens the case for EW as an overlooked practical innovation for helping the USA meet net-zero 2050 goals
5
,
6
. Public awareness of EW and equity impacts of EW deployment across the USA require further exploration
7
,
8
and we note that mobilizing an EW industry at the necessary scale could take decades.
A state-level analysis of the impact of enhanced weathering deployment on carbon sequestration on agricultural land suggests that enhanced weathering could help the USA meet net-zero 2050 goals.
Journal Article
Exascale applications: skin in the game
by
Kronfeld, Andreas
,
Halappanavar, Mahantesh
,
Kasen, Daniel
in
chemistry
,
computational science applications
,
computer science
2020
As noted in Wikipedia, skin in the game refers to having ‘incurred risk by being involved in achieving a goal’, where ‘ skin is a synecdoche for the person involved, and game is the metaphor for actions on the field of play under discussion’. For exascale applications under development in the US Department of Energy Exascale Computing Project, nothing could be more apt, with the skin being exascale applications and the game being delivering comprehensive science-based computational applications that effectively exploit exascale high-performance computing technologies to provide breakthrough modelling and simulation and data science solutions. These solutions will yield high-confidence insights and answers to the most critical problems and challenges for the USA in scientific discovery, national security, energy assurance, economic competitiveness and advanced healthcare. This article is part of a discussion meeting issue ‘Numerical algorithms for high-performance computational science’.
Journal Article
Small molecule APOL1 inhibitors as a precision medicine approach for APOL1-mediated kidney disease
2025
Chronic kidney disease affects ~10% of people worldwide and there are no disease modifying therapeutics that address the underlying cause of any form of kidney disease. Genome wide association studies have identified the G1 and G2 variants in the
apolipoprotein L1
(
APOL1
) gene as major contributors to a subtype of proteinuric kidney disease now referred to as APOL1-mediated kidney disease (AMKD). We hypothesized that inhibition of APOL1 could have therapeutic potential for this genetically-defined form of kidney disease. Here we describe the development of preclinical assays and the discovery of potent and specific APOL1 inhibitors with drug-like properties. We provide evidence that APOL1 channel activity drives podocyte injury and that inhibition of this activity stops APOL1-mediated cell death and kidney damage in a transgenic mouse model. These preclinical data, combined with clinical data from our previously published phase 2 proof-of-concept study, support the potential of APOL1 channel inhibition for the treatment of AMKD.
Apolipoprotein L1 genetic variants contribute to a subtype of proteinuric kidney disease referred to as APOL1-mediated kidney disease (AMKD). Here the authors report the discovery and characterization of potent and selective APOL1 ion channel inhibitors for the potential treatment of AMKD.
Journal Article
Therapeutic Anticoagulation with Heparin in Critically Ill Patients with Covid-19
by
Jacobson, Jeffrey R
,
Goligher, Ewan C
,
Estcourt, Lise J
in
Aged
,
Anticoagulants
,
Anticoagulants - administration & dosage
2021
In a randomized trial, patients with severe Covid-19 were assigned to receive either therapeutic-dose anticoagulation or usual-care pharmacologic thromboprophylaxis. At 21 days, therapeutic-dose anticoagulation did not improve hospital survival or the number of days free of cardiovascular or respiratory organ support.
Journal Article