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result(s) for
"Frank, Daniel Z"
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Investigating Culturally Contextualized Making With the Navajo Nation: Designing a Diné Makerspace
2021
Recently, the Navajo Nation has shown much interest in promoting engineering
education within the community. Capitalizing on the Diné's history and strength
in making, one initiative toward this goal has been the development of
makerspaces. While these makerspaces show promise and are a great resource to
the Navajo Nation, they resemble Western understandings of makerspaces and have
not incorporated the unique cultural identity of the Diné into the design of the
space, limiting their potential. To better support this initiative, this study
looks to answer the following research question: How can the Navajo
experience of making be integrated to design a culturally contextualized
makerspace? The results include four design considerations to help
guide the design of a makerspace for the Diné: inclusivity, individualism,
community building, and cultural conflicts and connections. This article also
presents one interpretation of a culturally contextualized Diné makerspace.
Journal Article
Investigating Culturally-Contextualized Making with the Navajo Nation
2018
Native Americans are one of the most severely underrepresented ethnic groups in the engineering field. To address their underrepresentation, this study looked to work with the Navajo Nation to design a makerspace for the community. A makerspace is a place where people can learn about engineering through making. This study was guided by two research questions: In what ways do the Navajo describe the experience of making? How can the Navajo experience of making be integrated to design a culturally-contextualized makerspace?To address these questions, data were collected in the form of semistructured interviews. The first research question was addressed by analyzing the data using phenomenography and Maslow’s hierarchy of needs framework. These data were also used in conjunction with the engineering design process to develop the design specifications required to address the second research question.The results from addressing the first research question are an awareness of the unique ways in which members of the Navajo Nation understand the experience of making. These results helped to inform three design concepts for a culturally-contextualized makerspace, concepts that integrate the unique ways the Navajo Nation understand the experience of making and are both responsive and respectful to the distinct needs and worldviews of their community. The engineering skills and attitudes developed in such makerspaces have the potential to both strengthen the engineering field and the Navajo Nation.
Dissertation
Bi-ancestral depression GWAS in the Million Veteran Program and meta-analysis in >1.2 million individuals highlight new therapeutic directions
by
Harrington, Kelly M.
,
Wendt, Frank R.
,
Nuñez, Yaira Z.
in
631/208/1515
,
631/208/205/2138
,
692/699/476/1414
2021
Major depressive disorder is the most common neuropsychiatric disorder, affecting 11% of veterans. Here we report results of a large meta-analysis of depression using data from the Million Veteran Program, 23andMe, UK Biobank and FinnGen, including individuals of European ancestry (
n
= 1,154,267; 340,591 cases) and African ancestry (
n
= 59,600; 25,843 cases). Transcriptome-wide association study analyses revealed significant associations with expression of
NEGR1
in the hypothalamus and
DRD2
in the nucleus accumbens, among others. We fine-mapped 178 genomic risk loci, and we identified likely pathogenicity in these variants and overlapping gene expression for 17 genes from our transcriptome-wide association study, including
TRAF3
. Finally, we were able to show substantial replications of our findings in a large independent cohort (
n
= 1,342,778) provided by 23andMe. This study sheds light on the genetic architecture of depression and provides new insight into the interrelatedness of complex psychiatric traits.
This bi-ancestral genome-wide association study of major depressive disorder (MDD) identified 178 risk variants. The results advance understanding of the biology of MDD and hint at new treatment possibilities.
Journal Article
Initial Invasive or Conservative Strategy for Stable Coronary Disease
2020
Patients with stable coronary disease were randomly assigned to an initial invasive strategy with angiography and revascularization if appropriate or to medical therapy alone. At 3.2 years, there was no significant difference between the groups with respect to the estimated rate of ischemic events. The findings were sensitive to the definition of myocardial infarction.
Journal Article
The BabyView camera: Designing a new head-mounted camera to capture children’s early social and visual environments
by
Xiang, Violet
,
Hsu, Oliver
,
Goodin, Sarah
in
Behavioral Science and Psychology
,
Child Development - physiology
,
Child, Preschool
2024
Head-mounted cameras have been used in developmental psychology research for more than a decade to provide a rich and comprehensive view of what infants see during their everyday experiences. However, variation between these devices has limited the field’s ability to compare results across studies and across labs. Further, the video data captured by these cameras to date has been relatively low-resolution, limiting how well machine learning algorithms can operate over these rich video data. Here, we provide a well-tested and easily constructed design for a head-mounted camera assembly—the BabyView—developed in collaboration with Daylight Design, LLC., a professional product design firm. The BabyView collects high-resolution video, accelerometer, and gyroscope data from children approximately 6–30 months of age via a GoPro camera custom mounted on a soft child-safety helmet. The BabyView also captures a large, portrait-oriented vertical field-of-view that encompasses both children’s interactions with objects and with their social partners. We detail our protocols for video data management and for handling sensitive data from home environments. We also provide customizable materials for onboarding families with the BabyView. We hope that these materials will encourage the wide adoption of the BabyView, allowing the field to collect high-resolution data that can link children’s everyday environments with their learning outcomes.
Journal Article
Transcranial direct current stimulation for acute major depressive episodes: Meta-analysis of individual patient data
2016
Transcranial direct current stimulation (tDCS) is a non-pharmacological intervention for depression. It has mixed results, possibly caused by study heterogeneity.
To assess tDCS efficacy and to explore individual response predictors.
Systematic review and individual patient data meta-analysis.
Data were gathered from six randomised sham-controlled trials, enrolling 289 patients. Active tDCS was significantly superior to sham for response (34% v. 19% respectively, odds ratio (OR) = 2.44, 95% CI 1.38-4.32, number needed to treat (NNT) = 7), remission (23.1% v. 12.7% respectively, OR = 2.38, 95% CI 1.22-4.64, NNT = 9) and depression improvement (B coefficient 0.35, 95% CI 0.12-0.57). Mixed-effects models showed that, after adjustment for other predictors and confounders, treatment-resistant depression and higher tDCS 'doses' were, respectively, negatively and positively associated with tDCS efficacy.
The effect size of tDCS treatment was comparable with those reported for repetitive transcranial magnetic stimulation and antidepressant drug treatment in primary care. The most important parameters for optimisation in future trials are depression refractoriness and tDCS dose.
Journal Article
Infrastructure for bioinformatics applications in Tanzania: Lessons from the Sickle Cell Programme
by
Kent, Jill
,
Mwita, Liberata A.
,
Sangeda, Raphael Z.
in
Analysis
,
Anemia, Sickle Cell - genetics
,
Anemia, Sickle Cell - therapy
2023
Sickle cell disease (SCD) is a common genetic disorder in Africa. Some ongoing work in SCD research includes the analysis and comparisons of variation in phenotypic presentations and disease outcomes with the genotypic signatures. This has contributed to the observed growth of molecular and genetic data in SCD. However, while the “omics” data continues to pile, the capacity to interpret and turn the genetic findings into clinical practice is still underdeveloped, especially in the developing region. Building bioinformatics infrastructure and capacity in the region is key to bridging the gap. This paper seeks to illustrate how the Sickle Cell Programme (SCP) at the Muhimbili University of Health and Allied Sciences (MUHAS) in Tanzania, modeled the integration of infrastructure for bioinformatics and clinical research while running day-to-day clinical care for SCD in Tanzania.
Journal Article
Genome-wide association study in individuals of European and African ancestry and multi-trait analysis of opioid use disorder identifies 19 independent genome-wide significant risk loci
2022
Despite the large toll of opioid use disorder (OUD), genome-wide association studies (GWAS) of OUD to date have yielded few susceptibility loci. We performed a large-scale GWAS of OUD in individuals of European (EUR) and African (AFR) ancestry, optimizing genetic informativeness by performing MTAG (Multi-trait analysis of GWAS) with genetically correlated substance use disorders (SUDs). Meta-analysis included seven cohorts: the Million Veteran Program, Psychiatric Genomics Consortium, iPSYCH, FinnGen, Partners Biobank, BioVU, and Yale-Penn 3, resulting in a total N = 639,063 (Ncases = 20,686;Neffective = 77,026) across ancestries. OUD cases were defined as having a lifetime OUD diagnosis, and controls as anyone not known to meet OUD criteria. We estimated SNP-heritability (h2SNP) and genetic correlations (rg). Based on genetic correlation, we performed MTAG on OUD, alcohol use disorder (AUD), and cannabis use disorder (CanUD). A leave-one-out polygenic risk score (PRS) analysis was performed to compare OUD and OUD-MTAG PRS as predictors of OUD case status in Yale-Penn 3. The EUR meta-analysis identified three genome-wide significant (GWS; p ≤ 5 × 10−8) lead SNPs—one at FURIN (rs11372849; p = 9.54 × 10−10) and two OPRM1 variants (rs1799971, p = 4.92 × 10−09; rs79704991, p = 1.11 × 10−08; r2 = 0.02). Rs1799971 (p = 4.91 × 10−08) and another OPRM1 variant (rs9478500; p = 1.95 × 10−08; r2 = 0.03) were identified in the cross-ancestry meta-analysis. Estimated h2SNP was 12.75%, with strong rg with CanUD (rg = 0.82; p = 1.14 × 10−47) and AUD (rg = 0.77; p = 6.36 × 10−78). The OUD-MTAG resulted in a GWAS Nequivalent = 128,748 and 18 independent GWS loci, some mapping to genes or gene regions that have previously been associated with psychiatric or addiction phenotypes. The OUD-MTAG PRS accounted for 3.81% of OUD variance (beta = 0.61;s.e. = 0.066; p = 2.00 × 10−16) compared to 2.41% (beta = 0.45; s.e. = 0.058; p = 2.90 × 10−13) explained by the OUD PRS. The current study identified OUD variant associations at OPRM1, single variant associations with FURIN, and 18 GWS associations in the OUD-MTAG. The genetic architecture of OUD is likely influenced by both OUD-specific loci and loci shared across SUDs.
Journal Article