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result(s) for
"Frattini, M"
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PTEN loss of expression predicts cetuximab efficacy in metastatic colorectal cancer patients
2007
To evaluate whether the epidermal growth factor receptor (EGFR), K-Ras and PTEN, all members of the EGFR signalling pathway, may affect the clinical response in cetuximab-treated metastatic colorectal cancer (mCRC) patients. Twenty-seven cetuximab-treated mCRC patients were evaluated for drug response and investigated for EGFR protein expression and gene status,
K-Ras
mutational status and PTEN protein expression. Ten patients achieved a partial response (PR) to cetuximab-based therapy. All 27 patients showed EGFR protein overexpression. Epidermal growth factor receptor gene amplification was observed in eight out of 27 (30%) and chromosome 7 marked polysomy in 16 (59%) patients. Partial response was observed in six out of eight patients with
EGFR
gene amplification, four out of 16 with marked polysomy and none out of three with eusomy (
P
<0.05). The
K-Ras
wild-type sequence was observed in 17 patients, and nine of them experienced a PR. Conversely,
K-Ras
was mutated in 10 cases, of which one patient experienced a PR (
P
<0.05). The PTEN protein was normally expressed in 16 patients, and 10 of them achieved a PR. In contrast, no benefit was documented in 11 patients with loss of PTEN activity (
P
<0.001). Patients with
EGFR
gene amplification or chromosome 7 marked polysomy respond to cetuximab. In addition to
K-Ras
mutations, we demonstrate for the first time that the loss of PTEN protein expression is associated with nonresponsiveness to cetuximab.
Journal Article
HER2 gene copy number status may influence clinical efficacy to anti-EGFR monoclonal antibodies in metastatic colorectal cancer patients
2013
Background:
In metastatic colorectal cancer (mCRC),
KRAS
is the only validated biomarker used to select patients for administration of epidermal growth factor receptor (EGFR)-targeted therapies. To identify additional predictive markers, we investigated the importance of HER2, the primary EGFR dimerisation partner, in this particular disease.
Methods:
We evaluated the
HER2
gene status by fluorescence
in situ
hybridisation (FISH) in 170
KRAS
wild-type mCRC patients treated with cetuximab or panitumumab.
Results:
Depending on
HER2
gene copy number status, patients showed three distinct cytogenetic profiles: 4% of patients had
HER2
gene amplification (R:
HER2
/CEP17⩾2) in all neoplastic cells (
HER2
-all-A), 61% of patients had
HER2
gain due to polysomy or to gene amplification in minor clones (
HER2-
FISH+*), and 35% of patients had no or slight
HER2
gain (
HER2
-FISH−). These subgroups were significantly correlated with different clinical behaviours, in terms of response rate (RR;
P
=0.0006), progression-free survival (PFS;
P
<0.0001) and overall survival (OS;
P
<0.0001). Patients with
HER2-
all-A profile experienced the worst outcome, patients with
HER2-
FISH− profile showed an intermediate behaviour and patients with
HER2-
FISH+* profile were related to the highest survival probability (median PFS in months: 2.5
vs
3.9
vs
7.6, respectively; median OS in months: 4.2
vs
9.7
vs
13, respectively).
Conclusion:
HER2
gene copy number status may influence the clinical response to anti-EGFR-targeted therapy in mCRC patients.
Journal Article
Enhancing the taxonomic delimitation of Lippia origanoides Kunth (Verbenaceae) by analyzing volatile terpenes and molecular markers in micropropagated accessions
by
Freitas, Jober C. E
,
Gorne, Íris B
,
Mezzonato-Pires, Ana C
in
Chemical composition
,
Correlation analysis
,
Essential oils
2024
This study aimed to contribute to the accurate taxonomic delimitation of Lippia origanoides Kunth (Verbenaceae), an important native Brazilian herb with diverse medicinal properties, culinary uses and wide phenotypic plasticity. For this purpose, the large-scale in vitro propagation of accessions of L. origanoides, initially identified as L. microphylla (two accessions), L. sidoides and L. salviaefolia, was established. In addition, the composition of the three major volatile organic terpenes in these accessions was compared. The micropropagation protocols revealed differences in the proliferative responses of the different accessions; in contrast, there was a predominance of the terpenes thymol, thymol methyl ether and thujopsene in the volatile organic fraction, regardless of the Lippia accession evaluated. The correlation analyses grouped the two L. microphylla accessions in poles opposite to the other two accessions (L. sidoides and L. salviaefolia), but multivariate principal component analysis (PCA) considering the major terpenes present in the organic fraction grouped the four accessions near the center of the PCA, indicating similarity among them. The results of this study demonstrated that L. origanoides can be efficiently propagated in vitro. Furthermore, based on the results of the analysis of the composition of major terpenes and molecular markers, the main contribution of the present study was to corroborate the hypothesis that the dissimilarity among the evaluated Lippia accessions is insufficient for them to constitute distinct species and that they are therefore synonymous with L. origanoides.Key MessageL. origanoides plants can be efficiently micropropagated, and molecular markers and the proportion of major terpenes present in its essential oil can be used in the taxonomic delimitation of the species.
Journal Article
AKT1(E17K) in human solid tumours
by
Cardone, L
,
Zanon, C
,
Bardelli, A
in
Class I Phosphatidylinositol 3-Kinases
,
Humans
,
Mutation
2008
The serine-threonine kinase AKT1 is a central player in the oncogenic pathway controlled by PI3K. Recently, a somatic mutation in AKT1 (E17K) has been detected in breast, colorectal, lung and ovarian cancers. The E17K change results in constitutive AKT1 activation and induces leukaemia in mice. We determined the occurrence of the E17K variant in a panel of 764 tumour samples. These included breast, lung, ovarian, colorectal and pancreatic carcinomas as well as melanomas and glioblastomas. Despite the fact that these tumours are known to bear alterations in genes involved in the PI3K signalling pathway, AKT1(E17K) was detected only in breast (16/273), colorectal (1/88) and lung (1/155) cancers. Within the neoplasms of breast origin, the AKT1(E17K) variant was mutually exclusive with respect to the PIK3CA(E454K or H1047R) alleles and was present only in ductal and lobular histotypes. Our results, showing that AKT1 mutations seem to occur in a tissue-specific fashion have basic and clinical implications. First, the activity of mutated AKT1 in oncogenic PI3K signalling could be strictly dependent on the cell and tissue milieu. Second, therapeutic efforts aimed at selective targeting the AKT1(E17K) variant could be effective mainly in specific cancer types.
Journal Article
Enasidenib plus azacitidine versus azacitidine alone in patients with newly diagnosed, mutant-IDH2 acute myeloid leukaemia (AG221-AML-005): a single-arm, phase 1b and randomised, phase 2 trial
by
Vyas, Paresh
,
de Botton, Stéphane
,
Zeidan, Amer M
in
Acute myeloid leukemia
,
Adverse events
,
Aged
2021
Enasidenib is an oral inhibitor of mutant isocitrate dehydrogenase-2 (IDH2) proteins. We evaluated the safety and activity of enasidenib plus azacitidine versus azacitidine alone in patients with newly diagnosed, mutant-IDH2 acute myeloid leukaemia ineligible for intensive chemotherapy.
This open-label, phase 1b/2 trial was done at 43 clinical sites in 12 countries (the USA, Germany, Canada, the UK, France, Spain, Australia, Italy, the Netherlands, Portugal, Switzerland, and South Korea). Eligible patients were aged 18 years or older and had newly diagnosed, mutant-IDH2 acute myeloid leukaemia, and an Eastern Cooperative Oncology Group performance status of 0–2. In the phase 1b dose-finding portion, patients received oral enasidenib 100 mg/day or 200 mg/day in continuous 28-day cycles, plus subcutaneous azacitidine 75 mg/m2 per day for 7 days of each cycle. In phase 2, patients were randomly assigned (2:1) via an interactive web response system to enasidenib plus azacitidine or azacitidine-only, stratified by acute myeloid leukaemia subtype (de novo or secondary). The primary endpoint in the phase 2 portion was the overall response rate in the intention-to-treat population at a prespecified interim analysis (Aug 20, 2019) when all patients had at least 1 year of follow-up. Safety was assessed in all patients who received at least one dose of study drug. The trial is registered with ClinicalTrials.gov, NCT02677922, and is ongoing.
Between June 3, 2016, and Aug 2, 2018, 322 patients were screened and 107 patients with mutant-IDH2 acute myeloid leukaemia were enrolled. At data cutoff for the interim analysis, 24 patients (including two from the phase 1 portion) were still receiving their assigned treatment. Six patients were enrolled in the phase 1b dose-finding portion of the trial and received enasidenib 100 mg (n=3) or 200 mg (n=3) in combination with azacitidine. No dose-limiting toxicities occurred and the enasidenib 100 mg dose was selected for phase 2. In phase 2, 101 patients were randomly assigned to enasidenib plus azacitidine (n=68) or azacitidine only (n=33). Median age was 75 years (IQR 71–78). 50 (74%; 95% CI 61–84) patients in the enasidenib plus azacitidine combination group and 12 (36%; 20–55) patients in the azacitidine monotherapy group achieved an overall response (odds ratio 4·9 [95% CI 2·0–11·9]; p=0·0003). Common treatment-related grade 3 or 4 adverse events with enasidenib plus azacitidine were thrombocytopenia (25 [37%] of 68 vs six [19%] of 32 in the azacitidine-only group), neutropenia (25 [37%] vs eight [25%]), anaemia (13 [19%] vs seven [22%]), and febrile neutropenia (11 [16%] vs five [16%]). Serious treatment-related adverse events were reported in 29 (43%) patients in the combination group and 14 (44%) patients in the azacitidine-only group; serious treatment-related adverse events occurring in more than 5% of patients in either group were febrile neutropenia (nine [13%] in the combination group vs five [16%] in the azacitidine-only group), differentiation syndrome (seven [10%] vs none), and pneumonia (three [4%] vs two [6%]). No treatment-related deaths were reported.
Combination enasidenib plus azacitidine was well tolerated and significantly improved overall response rates compared with azacitidine monotherapy, suggesting that this regimen can improve outcomes for patients with newly diagnosed, mutant-IDH2 acute myeloid leukaemia.
Bristol Myers Squibb.
Journal Article
Differing deregulation of EGFR and downstream proteins in primary colorectal cancer and related metastatic sites may be clinically relevant
by
Camponovo, A
,
De Dosso, S
,
Bordoni, A
in
Aged
,
Aged, 80 and over
,
Antibodies, Monoclonal - therapeutic use
2009
Cetuximab and panitumumab efficacy in metastatic colorectal cancer (mCRC) may be influenced by
EGFR
gene status and/or deregulation of its downstream signalling proteins detected in primary tumour. However, metastasis might have different molecular patterns with respect to primary tumour, possibly affecting the prediction of EGFR-targeted therapy efficacy. We analysed primary tumour and metastasis in 38 mCRC patients. Twelve cases were cetuximab/panitumumab treated.
EGFR
gene status and protein expression were investigated through fluorescent
in situ
hybridisation and immunohistochemistry (IHC),
K-Ras
/
BRAF
mutations by sequencing and PTEN expression by IHC. We observed
EGFR
gene deregulation in 25 out of 36 primary tumours and 29 out of 36 metastases,
K-Ras
mutations in 16 out of 37 cancers and in 15 out of 37 metastases,
BRAF
mutations in 2 out of 36 cancers and 2 out of 36 metastases and PTEN loss in 8 out of 38 cancers and 12 out of 38 metastases. For the first time in literature, we show that primary colorectal cancer and paired metastasis may exhibit difference with respect to EGFR pathway deregulation mechanisms possibly implying a different response to cetuximab or panitumumab treatment. The investigation of treated patients confirms this hypothesis. We therefore suggest that the analysis of metastatic lesion should be considered in patient management as well as in designing future clinical trials aimed to investigate the effect of anti-EGFR monoclonal antibodies in the treatment of mCRC.
Journal Article
Prognostic and predictive value of TOPK stratified by KRAS and BRAF gene alterations in sporadic, hereditary and metastatic colorectal cancer patients
by
Lugli, A
,
Frick, H
,
Diebold, J
in
Adenocarcinoma - chemistry
,
Adenocarcinoma - drug therapy
,
Adenocarcinoma - epidemiology
2010
Background:
Our aim was to investigate the prognostic and predictive value of the oncogenic MAPKK-like protein T-cell-originated protein kinase (TOPK) stratified by
KRAS
and
BRAF
mutations in patients with sporadic, hereditary and metastatic colorectal cancer (CRC) treated with anti-EGFR therapy.
Methods:
Immunohistochemistry (IHC) for TOPK was performed on four study groups. Group 1 included two subgroups of 543 and 501 sporadic CRC patients used to test the reliability of TOPK expression by IHC. In Group 2, representing an additional 222 sporadic CRCs, the prognostic effect of TOPK stratified by KRAS and BRAF was assessed. The prognostic effect of TOPK was further analysed in Group 3, representing 71 hereditary Lynch syndrome-associated CRC patients. In Group 4, the predictive and prognostic value of TOPK was analysed on 45 metastatic patients treated with cetuximab or panitumumab stratified by
KRAS
and
BRAF
gene status.
Results:
In both sporadic CRC subgroups (Group 1), associations of diffuse TOPK expression with clinicopathological features were reproducible. Molecular analysis of sporadic CRCs in Group 2 showed that diffuse TOPK expression was associated with KRAS and BRAF mutations (p<0.001) and with poor outcome in patients with either mutation in univariate and multivariate analysis (
P
=0.017). In hereditary patients (Group 3), diffuse TOPK was linked to advanced pT stage. In metastatic patients treated with anti-EGFR therapy (Group 4), diffuse TOPK expression was linked to dismal outcome despite objective response to treatment (
P
=0.01).
Conclusions:
TOPK expression is an unfavourable prognostic indicator in sporadic patients with
KRAS
or
BRAF
mutations and also in patients with metastatic disease experiencing a response to anti-EGFR therapies. The inhibition of TOPK, which could benefit 30–40% of CRC patients, may represent a new avenue of investigation for targeted therapy.
Journal Article
Monitoring the authenticity of low-fat yogurts by an artificial neural network
by
da Cruz, A.G.
,
Cadena, R.S.
,
Faria, J.A.F.
in
analysis
,
Animal productions
,
artificial neural network
2009
The growing consumption of low- and reduced-fat dairy products demands routine control of their authenticity by health agencies. The usual analyses of fat in dairy products are very simple laboratory methods; however, they require manipulation and use of reagents of a corrosive nature, such as sulfuric acid, to break the chemical bounds between fat and proteins. Additionally, they generate chemical residues that require an appropriate destination. In this work, the use of an artificial neural network based on simple instrumental analyses, such as pH, color, and hardness (inputs) is proposed for the classification of commercial yogurts in the low- and reduced-fat categories (outputs). A total of 108 strawberry-flavored yogurts (48 probiotic low-fat, 36 low-fat, and 24 full-fat yogurts) belonging to several commercial brands and from different batches were used in this research. The statistical analysis showed different features for each yogurt category; thus, a database was built and a neural model was trained with the Levenberg-Marquardt algorithm by using the neural network toolbox of the software MATLAB 7.0.1. Validation with unseen data pairs showed that the proposed model was 100% efficient. Because the instrumental analyses do not require any sample preparation and do not produce any chemical residues, the proposed procedure is a fast and interesting approach to monitoring the authenticity of these products.
Journal Article
Mutation analysis of the EGFR gene and downstream signalling pathway in histologic samples of malignant pleural mesothelioma
2013
Background:
As epidermal growth factor receptor (EGFR) is involved in the pathogenesis of malignant pleural mesotheliomas (MPMs), the anti-EGFR drugs may be effective in treating MPM patients. Mutations of the
EGFR
gene or its downstream effectors may cause constitutive activation leading to cell proliferation, and the inhibition of apoptosis and metastases. Consequently, molecular profiling is essential for select patients with MPM who may respond to anti-EGFR therapies.
Methods:
After manual macrodissection, genomic DNA was extracted from 77 histological samples of MPM: 59 epithelioid, 10 biphasic, and 8 sarcomatoid.
Epidermal growth factor receptor
gene mutations were sought by means of real-time polymerase chain reaction (PCR) and direct sequencing,
KRAS
gene mutations by mutant-enriched PCR, and
PIK3CA
and
BRAF
gene mutations by direct sequencing.
Results:
Gene mutations were identified in nine cases (12%): five
KRAS
, three
BRAF
, and one
PI3KCA
mutation; no
EGFR
gene mutations were detected. There was no difference in disease-specific survival between the patients with or without gene mutations (
P
=0.552).
Conclusions:
Mutations in EGFR downstream pathways are not rare in MPM. Although none of those found in this study seemed to be prognostically significant, they may support a more specific selection of patients for future trials.
Journal Article
MFG-E8/lactadherin regulates cyclins D1/D3 expression and enhances the tumorigenic potential of mammary epithelial cells
2012
Milk fat globule-EGF factor 8 (MFG-E8) is a glycoprotein highly expressed in breast cancer that contributes to tumor progression through largely undefined mechanisms. By analyzing publicly available gene expression profiles of breast carcinomas, we found that MFG-E8 is highly expressed in primary and metastatic breast carcinomas, associated with absent estrogen receptor expression. Immunohistochemistry analysis of breast cancer biopsies revealed that MFG-E8 is expressed on the cell membrane as well as in the cytoplasm and nucleus. We also show that increased expression of MFG-E8 in mammary carcinoma cells increases their tumorigenicity in immunodeficient mice, and conversely, its downregulation reduces their
in vivo
growth. Moreover, expression of MFG-E8 in immortalized mammary epithelial cells promotes their growth and branching in three-dimensional collagen matrices and induces the expression of cyclins D1/D3 and N-cadherin. A mutant protein unable to bind integrins can in part exert these effects, indicating that MFG-E8 function is only partially dependent on integrin activation. We conclude that MFG-E8-dependent signaling stimulates cell proliferation and the acquisition of mesenchymal properties and contributes to mammary carcinoma development.
Journal Article