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"Fu, Yu"
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Single-cell RNA sequencing reveals intrahepatic and peripheral immune characteristics related to disease phases in HBV-infected patients
ObjectiveA comprehensive immune landscape for HBV infection is pivotal to achieve HBV cure.DesignWe performed single-cell RNA sequencing of 2 43 000 cells from 46 paired liver and blood samples of 23 individuals, including six immune tolerant, 5 immune active (IA), 3 acute recovery (AR), 3 chronic resolved and 6 HBV-free healthy controls (HCs). Flow cytometry and histological assays were applied in a second HBV cohort for validation.ResultsBoth IA and AR were characterised by high levels of intrahepatic exhausted CD8+ T (Tex) cells. In IA, Tex cells were mainly derived from liver-resident GZMK+ effector memory T cells and self-expansion. By contrast, peripheral CX3CR1+ effector T cells and GZMK+ effector memory T cells were the main source of Tex cells in AR. In IA but not AR, significant cell–cell interactions were observed between Tex cells and regulatory CD4+ T cells, as well as between Tex and FCGR3A+ macrophages. Such interactions were potentially mediated through human leukocyte antigen class I molecules together with their receptors CANX and LILRBs, respectively, contributing to the dysfunction of antiviral immune responses. By contrast, CX3CR1+GNLY+ central memory CD8+ T cells were concurrently expanded in both liver and blood of AR, providing a potential surrogate marker for viral resolution. In clinic, intrahepatic Tex cells were positively correlated with serum alanine aminotransferase levels and histological grading scores.ConclusionOur study dissects the coordinated immune responses for different HBV infection phases and provides a rich resource for fully understanding immunopathogenesis and developing effective therapeutic strategies.
Journal Article
Carbon-doped SnS2 nanostructure as a high-efficiency solar fuel catalyst under visible light
Photocatalytic formation of hydrocarbons using solar energy via artificial photosynthesis is a highly desirable renewable-energy source for replacing conventional fossil fuels. Using an
l
-cysteine-based hydrothermal process, here we synthesize a carbon-doped SnS
2
(SnS
2
-C) metal dichalcogenide nanostructure, which exhibits a highly active and selective photocatalytic conversion of CO
2
to hydrocarbons under visible-light. The interstitial carbon doping induced microstrain in the SnS
2
lattice, resulting in different photophysical properties as compared with undoped SnS
2
. This SnS
2
-C photocatalyst significantly enhances the CO
2
reduction activity under visible light, attaining a photochemical quantum efficiency of above 0.7%. The SnS
2
-C photocatalyst represents an important contribution towards high quantum efficiency artificial photosynthesis based on gas phase photocatalytic CO
2
reduction under visible light, where the in situ carbon-doped SnS
2
nanostructure improves the stability and the light harvesting and charge separation efficiency, and significantly enhances the photocatalytic activity.
Photocatalytic reduction of CO
2
to hydrocarbons is a promising route to both CO
2
utilization and renewable fuel production. Here the authors identify that carbon-doped SnS
2
possesses a high catalytic efficiency towards CO
2
reduction owing to low photogenerated charge recombination rates.
Journal Article
Architecture of gene regulatory networks controlling flower development in Arabidopsis thaliana
Floral homeotic transcription factors (TFs) act in a combinatorial manner to specify the organ identities in the flower. However, the architecture and the function of the gene regulatory network (GRN) controlling floral organ specification is still poorly understood. In particular, the interconnections of homeotic TFs, microRNAs (miRNAs) and other factors controlling organ initiation and growth have not been studied systematically so far. Here, using a combination of genome-wide TF binding, mRNA and miRNA expression data, we reconstruct the dynamic GRN controlling floral meristem development and organ differentiation. We identify prevalent feed-forward loops (FFLs) mediated by floral homeotic TFs and miRNAs that regulate common targets. Experimental validation of a coherent FFL shows that petal size is controlled by the SEPALLATA3-regulated miR319/TCP4 module. We further show that combinatorial DNA-binding of homeotic factors and selected other TFs is predictive of organ-specific patterns of gene expression. Our results provide a valuable resource for studying molecular regulatory processes underlying floral organ specification in plants.
Homeotic transcription factors and miRNAs promote floral organ specification. Here Chen et al. reconstruct gene regulatory networks in
Arabidopsis
flowers and find evidence for feed forward loops between transcription factors, miRNAs and their targets that determine organ-specific gene expression.
Journal Article
Weak decays of doubly heavy baryons: the 1/2→1/2 case
Very recently, the LHCb collaboration has observed in the final state
Λ
c
+
K
-
π
+
π
+
a resonant structure that is identified as the doubly charmed baryon
Ξ
cc
+
+
. Inspired by this observation, we investigate the weak decays of doubly heavy baryons
Ξ
cc
+
+
,
Ξ
cc
+
,
Ω
cc
+
,
Ξ
bc
(
′
)
+
,
Ξ
bc
(
′
)
0
,
Ω
bc
(
′
)
0
,
Ξ
bb
0
,
Ξ
bb
-
and
Ω
bb
-
and focus on the decays into spin 1 / 2 baryons in this paper. At the quark level these decay processes are induced by the
c
→
d
/
s
or
b
→
u
/
c
transitions, and the two spectator quarks can be viewed as a scalar or axial vector diquark. We first derive the hadronic form factors for these transitions in the light-front approach and then apply them to predict the partial widths for the semileptonic and nonleptonic decays of doubly heavy baryons. We find that the number of decay channels is sizable and can be examined in future measurements at experimental facilities like LHC, Belle II and CEPC.
Journal Article
A Review on the Electrochemically Self-organized Titania Nanotube Arrays: Synthesis, Modifications, and Biomedical Applications
Titania nanotubes grown by anodic oxidation have intrigued the material science community by its many unique and potential properties, and the synthesis of technology is merging to its mature stage. The present review will focus on TiO
2
nanotubes grown by self-organized electrochemical anodization from Ti metal substrate, which critically highlights the synthesis of this type of self-organized titania nanotube layers and the means to influence the size, shape, the degree of order, and crystallized phases via adjusting the anodization parameters and the subsequent thermal annealing. The relationship between dimensions and properties of the anodic TiO
2
nanotube arrays will be presented. The latest progress and significance of the research on formation mechanism of anodic TiO
2
nanotubes are briefly discussed. Besides, we will show the most promising applications reported recently in biomedical directions and modifications carried out by doping, surface modification, and thermal annealing toward improving the properties of anodically formed TiO
2
nanotubes. At last, some unsolved issues and possible future directions of this field are indicated.
Journal Article