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Large-scale commercialization of the Haber-Bosch (HB) process is resulting in intensification of nitrogen (N) fertilizer use worldwide. Globally N fertilizer use is far outpacing that of phosphorus (P) fertilizer. Much of the increase in N fertilizers is also now in the form of urea, a reduced form of N. Incorporation of these fertilizers into agricultural products is inefficient leading to significant environmental pollution and aquatic eutrophication. Of particular concern is the increased occurrence of harmful algal blooms (HABs) in waters receiving nutrient enriched runoff. Many phytoplankton causing HABs have physiological adaptive strategies that make them favored under conditions of elevated N : P conditions and supply of chemically reduced N (ammonium, urea). We propose that the HB-HAB link is a function of (1) the inefficiency of incorporation of N fertilizers in the food supply chain, the leakiness of the N cycle from crop to table, and the fate of lost N relative to P to the environment; and (2) adaptive physiology of many HABs to thrive in environments in which there is excess N relative to classic nutrient stoichiometric proportions and where chemically reduced forms of N dominate. The rate of HAB expansion is particularly pronounced in China where N fertilizer use has escalated very rapidly, where soil retention is declining, and where blooms have had large economic and ecological impacts. There, in addition to increased use of urea and high N : P based fertilizers overall, escalating aquaculture production adds to the availability of reduced forms of N, as does atmospheric deposition of ammonia. HABs in both freshwaters and marginal seas in China are highly related to these overall changing N loads and ratios. Without more aggressive N control the future outlook in terms of HABs is likely to include more events, more often, and they may also be more toxic.

Nutrient pollution and greenhouse gas emissions related to crop agriculture and confined animal feeding operations (CAFOs) in the US have changed substantially in recent years, in amounts and forms. This review is intended to provide a broad view of how nutrient inputs—from fertilizer and CAFOs—as well as atmospheric NH 3 and greenhouse gas emissions, are changing regionally within the US and how these changes compare with nutrient inputs from human wastewater. Use of commercial nitrogen (N) fertilizer in the US, which now exceeds 12,000,000 metric tonnes (MT) continues to increase, at a rate of 60,000 MT per year, while that of phosphorus (P) has remained nearly constant over the past decade at around 1,800,000 MT. The number of CAFOs in the US has increased nearly 10% since 2012, driven largely by a near 13% increase in hog production. The annualized inventory of cattle, dairy cows, hogs, broiler chickens and turkeys is approximately 8.7 billion, but CAFOs are highly regionally concentrated by animal sector. Countrywide, N applied by fertilizer is about threefold greater than manure N inputs, but for P these inputs are more comparable. Total manure inputs now exceed 4,000,000 MT as N and 1,400,000 MT as P. For both N and P, inputs and proportions vary widely by US region. The waste from hog and dairy operations is mainly held in open lagoons that contribute to NH₃ and greenhouse gas (as CH₄ and N₂O) emissions. Emissions of NH 3 from animal waste in 2019 were estimated at [4,500,000 MT. Emissions of CH 4 from manure management increased 66 % from 1990 to 2017 (that from dairy increased 134 %, cattle 9.6 %, hogs 29 % and poultry 3 %), while those of N 2 O increased 34 % over the same time period (dairy 15 %, cattle 46 %, hogs 58 %, and poultry 14 %). Waste from CAFOs contribute substantially to nutrient pollution when spread on fields, often at higher N and P application rates than those of commercial fertilizer. Managing the runoff associated with fertilizer use has improved with best management practices, but reducing the growing waste from CAFO operations is essential if eutrophication and its effects on fresh and marine waters–namely hypoxia and harmful algal blooms (HABs)—are to be reduced.

Previous studies have revealed that mixotrophs can become more heterotrophic as the temperature rises, although these studies were primarily conducted under laboratory conditions with temperature-acclimated grazers. This study investigated the short-term thermal regulation of grazing and photosynthetic performance, measured in terms of the maximum relative electron transport rate (rETRmax), of natural Karenia brevis populations on cultured Synechococcus. Bloom waters were collected in Sarasota, Florida, during the fall of 2022. Synechococcus were inoculated into K. brevis bloom waters in varying ratios and incubated at an ambient temperature and an ambient temperature ±5 °C (19, 24, and 29 °C). In general, the grazing coefficient, clearance, and ingestion rates were higher in warmer waters, although ingestion rates were significantly regulated by the prey-to-grazer ratios and, to a lesser degree, by temperatures (22 to 204 Synechococcus K. brevis−1 d−1). Overall, the rETRmax of Synechococcus controls generally increased over time with a more substantial increase at warmer temperatures, but, in the presence of grazers, the rETRmax of Synechococcus did not increase, and, remarkably, even decreased in some cases. These findings suggest that grazing on Synechococcus could directly regulate Synechococcus concentrations and indirectly reduce the photosynthetic performance of prey. Furthermore, this study demonstrates that the thermal regulation of grazing and photosynthetic performance can occur on a short-term basis.

While the global increase in the use of nitrogen-based fertilizers has been well recognized, another change in fertilizer usage has simultaneously occurred: a shift toward urea-based products. Worldwide use of urea has increased more than 100-fold in the past 4 decades and now constitutes > 50% of global nitrogenous fertilizer usage. Global urea usage extends beyond agricultural applications; urea is also used extensively in animal feeds and in manufacturing processes. This change has occurred to satisfy the world's need for food and more efficient agriculture. Long thought to be retained in soils, new data are suggestive of significant overland transport of urea to sensitive coastal waters. Urea concentrations in coastal and estuarine waters can be substantially elevated and can represent a large fraction of the total dissolved organic nitrogen pool. Urea is used as a nitrogen substrate by many coastal phytoplankton and is increasingly found to be important in the nitrogenous nutrition of some harmful algal bloom (HAB) species. The global increase from 1970 to 2000 in documented incidences of paralytic shellfish poisoning, caused by several HAB species, is similar to the global increase in urea use over the same 3 decades. The trend toward global urea use is expected to continue, with the potential for increasing pollution of sensitive coastal waters around the world.

Mariculture (marine aquaculture) generates nutrient waste either through the excretion by the reared organisms, or through direct enrichment by, or remineralization of, externally applied feed inputs. Importantly, the waste from fish or shellfish cannot easily be managed, as most is in dissolved form and released directly to the aquatic environment. The release of dissolved and particulate nutrients by intensive mariculture results in increasing nutrient loads (finfish and crustaceans), and changes in nutrient stoichiometry (all mariculture types). Based on different scenarios, we project that nutrients from mariculture will increase up to six fold by 2050 with exceedance of the nutrient assimilative capacity in parts of the world where mariculture growth is already rapid. Increasing nutrient loads and altered nutrient forms (increased availability of reduced relative to oxidized forms of nitrogen) and/or stoichiometric proportions (altered nitrogen:phosphorus ratios) may promote an increase in harmful algal blooms (HABs) either directly or via stimulation of algae on which mixotrophic HABs may feed. HABs can kill or intoxicate the mariculture product with severe economic losses, and can increase risks to human health.

The Changjiang (Yangtze) River is one of the largest rivers in the world, and its estuary and offshore plume create a diversity of ecological habitats for the phytoplankton community. The phytoplankton community has to balance between light limitation in the sediment-laden inshore waters and nutrient availability in the offshore waters. Active fluorescence measurements can provide rapid, non-intrusive estimates of photosynthetic characteristics at high spatial and temporal resolution. In the summer of 2020, a field survey of hydrodynamic characters, availability of nutrients, the maximum quantum efficiency of photosystem II (Fv/Fm), and rapid light curves across the Changjiang River Estuary and its adjacent sea was conducted, assessing relationships between photosynthetic physiology and biomass accumulation. The photosynthetic activities significantly differed among fresh river water, the Estuary Turbidity Maximum (ETM), river plume, and the East China Sea Water. The photosynthetic physiology of phytoplankton was the most activate near the front of Changjiang Diluted Water, where the Fv/Fm was over 0.5. Phytoplankton growth was alleviated from light limitation downstream of the ETM, and benefited from phosphorus supply via tidal mixing and upwelling. The relatively suitable light and nutrients led to high photosynthetic activities, supporting increased productivity and biomass in this water. The phytoplankton in the Changjiang estuary river mouth and the ETM were under intense stress, suggested by the Fv/Fm values under 0.3. Also, the strong vertical mixing process diluted the river nutrients before the phytoplankton consumed them. Nutrients further limited the phytoplankton offshore in the East China Sea.

Noctiluca scintillans ( Noctiluca ) is a cosmopolitan red tide forming heterotrophic dinoflagellate. In this study, we investigated its ingestion, elemental growth yield and excretion when supplied with different quality food (nutrient-balanced, N-limited and P-limited). Total cellular elemental ratios of Noctiluca were nearly homeostatic, but the ratio of its intracellular NH 4 + and PO 4 3− was weakly regulated. Noctiluca thus seems able to differentially allocate N and P to organic and inorganic pools to maintain overall homeostasis, and it regulated its internal N more strongly and efficiently than P. The latter was substantiated by its comparatively stable C:N ratio and compensatory feeding on N-limited prey. Using both starvation experiments and mass balance models, it was found that excretion of C, N, and P by Noctiluca is highly affected by prey nutritional quality. However, based on modeling results, nutrients seem efficiently retained in actively feeding Noctiluca for reproduction rather than directly released as was shown experimentally in starved cells. Moreover, actively feeding Noctiluca tend to retain P and preferentially release N, highlighting its susceptible to P-limitation. Recycling of N and P by Noctiluca may supply substantial nutrients for phytoplankton growth, especially following bloom senescence.

While many harmful algal blooms have been associated with increasing eutrophication, not all species respond similarly and the increasing challenge, especially for resource managers, is to determine which blooms are related to eutrophication and to understand why particular species proliferate under specific nutrient conditions. The overall goal of this brief review is to describe why nutrient loads are not changing in stoichiometric proportion to the “Redfield ratio”, and why this has important consequences for algal growth. Many types of harmful algae appear to be able to thrive, and/or increase their production of toxins, when nutrient loads are not in proportion classically identified as Redfield ratios. Here we also describe some of the physiological mechanisms of different species to take up nutrients and to thrive under conditions of nutrient imbalance.

Worldwide increases in human and wildlife diseases have challenged ecologists to understand how large-scale environmental changes affect host–parasite interactions. One of the most profound changes to Earth's ecosystems is the alteration of global nutrient cycles, including those of phosphorus (P) and especially nitrogen (N). Along with the obvious direct benefits of nutrient application for food production, anthropogenic inputs of N and P can indirectly affect the abundance of infectious and noninfectious pathogens. The mechanisms underpinning observed correlations, however, and how such patterns vary with disease type, have long remained conjectural. Here, we highlight recent experimental advances to critically evaluate the relationship between environmental nutrient enrichment and disease. Given the interrelated nature of human and wildlife disease emergence, we include a broad range of human and wildlife examples from terrestrial, marine, and freshwater ecosystems. We examine the consequences of nutrient pollution on directly transmitted, vector-borne, complex life cycle, and noninfectious pathogens, including West Nile virus, malaria, harmful algal blooms, coral reef diseases, and amphibian malformations. Our synthetic examination suggests that the effects of environmental nutrient enrichment on disease are complex and multifaceted, varying with the type of pathogen, host species and condition, attributes of the ecosystem, and the degree of enrichment; some pathogens increase in abundance whereas others decline or disappear. Nevertheless, available evidence indicates that ecological changes associated with nutrient enrichment often exacerbate infection and disease caused by generalist parasites with direct or simple life cycles. Observed mechanisms include changes in host/vector density, host distribution, infection resistance, pathogen virulence or toxicity, and the direct supplementation of pathogens. Collectively, these pathogens may be particularly dangerous because they can continue to cause mortality even as their hosts decline, potentially leading to sustained epidemics or chronic pathology. We suggest that interactions between nutrient enrichment and disease will become increasingly important in tropical and subtropical regions, where forecasted increases in nutrient application will occur in an environment rich with infectious pathogens. We emphasize the importance of careful disease management in conjunction with continued intensification of global nutrient cycles.

Blooms of the toxigenic dinoflagellate Karenia brevis are an almost annual occurrence in the eastern Gulf of Mexico, typically initiating in late summer and early fall months and terminating in late spring or earlier. The question of whether blooms have been expanding in frequency or duration has long been debated. Recently, a Bloom Severity Index (BSI) was developed that captures changes in bloom magnitude based on cell concentrations normalized to maximum observed values. Here, changes in the BSI (severity and bloom duration) were examined for the period from 1970-2019, a period of rapid climate change and increased anthropogenic pressures. This time period encompassed several changes in the Oceanic Niño Index (the El Niño-Southern Oscillation), including a shift from a highly positive to a negative North Atlantic Oscillation in the mid 1990s, bringing with it increased precipitation and more intensive storms. Annual BSI and bloom duration have increased with increasing temperatures, and blooms have also become longer in duration in relation to increased temperatures and river flows since the mid 1990s. As increased precipitation is related to increased nutrient runoff, regional fertilizer use and the anthropogenic nitrogen (N) footprint based on population census data as proxies of nitrogen loads were examined. The duration of severe blooms was highly correlated with the increasing anthropogenic N footprint, especially when BSI values were averaged across multiple years. These relationships highlight the importance of climate changes and of increasing population since the 1980s and help to explain why earlier analyses of nutrient loads and bloom severity were inconclusive. To reduce bloom severity or duration in the future, reductions in N loads and releases from the Caloosahatchee River are needed more than ever to counteract the increasing pressures from climate change.