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result(s) for
"Gharbi, Mariem"
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Genetic characterization of suspected MODY patients in Tunisia by targeted next-generation sequencing
by
Hechmi, Meriem
,
Elouej, Sahar
,
Gharbi, Mariem
in
ABCC8 gene
,
Autosomal dominant inheritance
,
Bioinformatics
2019
AimsMaturity Onset Diabetes of the Young (MODY) is a monogenic form of diabetes with autosomal dominant inheritance pattern. The diagnosis of MODY and its subtypes is based on genetic testing. Our aim was investigating MODY by means of next-generation sequencing in the Tunisian population.MethodsWe performed a targeted sequencing of 27 genes known to cause monogenic diabetes in 11 phenotypically suspected Tunisian patients. We retained genetic variants passing filters of frequency in public databases as well as their probable effects on protein structures and functions evaluated by bioinformatics prediction tools.ResultsFive heterozygous variants were found in four patients. They include two mutations in HNF1A and GCK that are the causative genes of the two most prevalent MODY subtypes described in the literature. Other possible mutations, including novel frameshift and splice-site variants were identified in ABCC8 gene.ConclusionsOur study is the first to investigate the clinical application of targeted next-generation sequencing for the diagnosis of MODY in Africa. The combination of this approach with a filtering/prioritization strategy made a step towards the identification of MODY mutations in the Tunisian population.
Journal Article
Dietary Patterns and Socioeconomic Factors Affecting Mediterranean Diet Adherence in Tunisia
2025
This study aims to assess Tunisian consumers' adherence to the Mediterranean diet (MD) and identify socioeconomic factors influencing this adherence. A national survey involving 400 individuals is performed and data are analyzed. The results of the Mediterranean Diet Adherence Screener (MEDAS) score calculation allowed the classification of consumers into three groups: moderate adherence group ( 65.5% of the total population), high adherence (5.8%) and low adherence group (28.7% ) . The Probit model results showed that individuals with high adherence to the Mediterranean diet primarily consume olive oil , fruits, legumes, and fish and that Income and socio Professional category ( SPC) are negatively associated with low adherence. In addition, a higher adherence was observed in southern regions compared to northern regions. These findings highlight the need for targeted promotion and marketing strategies to raise awareness of the Mediterranean diet's benefits and the health risks associated with modern diets.
Journal Article
Genome-wide insights on gastrointestinal nematode resistance in autochthonous Tunisian sheep
2021
Gastrointestinal nematode (GIN) infections have negative impacts on animal health, welfare and production. Information from molecular studies can highlight the underlying genetic mechanisms that enhance host resistance to GIN. However, such information often lacks for traditionally managed indigenous livestock. Here, we analysed 600 K single nucleotide polymorphism genotypes of GIN infected and non-infected traditionally managed autochthonous Tunisian sheep grazing communal natural pastures. Population structure analysis did not find genetic differentiation that is consistent with infection status. However, by contrasting the infected versus non-infected cohorts using ROH, LR-GWAS, FST and XP-EHH, we identified 35 candidate regions that overlapped between at least two methods. Nineteen regions harboured QTLs for parasite resistance, immune capacity and disease susceptibility and, ten regions harboured QTLs for production (growth) and meat and carcass (fatness and anatomy) traits. The analysis also revealed candidate regions spanning genes enhancing innate immune defence (SLC22A4, SLC22A5, IL-4, IL-13), intestinal wound healing/repair (IL-4, VIL1, CXCR1, CXCR2) and GIN expulsion (IL-4, IL-13). Our results suggest that traditionally managed indigenous sheep have evolved multiple strategies that evoke and enhance GIN resistance and developmental stability. They confirm the importance of obtaining information from indigenous sheep to investigate genomic regions of functional significance in understanding the architecture of GIN resistance.
Journal Article
Toxoplasma gondii infection and toxoplasmosis in North Africa: a review
by
Rekik, Mourad
,
Adel Taha Al-Hosary, Amira
,
Anis Boussadoun, Mohamed
in
Abiotic factors
,
Africa, Northern
,
Algeria
2019
Toxoplasmosis is an important zoonosis caused by an obligate intracellular parasitic protozoan, Toxoplasma gondii. It is worldwide distributed in all warm-blooded vertebrates including humans. The present review aimed to collect, compile and summarize the current data on the prevalence of T. gondii infection in humans and animals in North Africa. Distribution patterns and risk factors for Toxoplasma infection were also discussed, focusing on biotic and abiotic factors in the five North African countries (Morocco, Algeria, Tunisia, Libya and Egypt).
Journal Article
Immunogenicity of Mix-and-Match CoronaVac/BNT162b2 Regimen versus Homologous CoronaVac/CoronaVac Vaccination: A Single-Blinded, Randomized, Parallel Group Superiority Trial
2023
(1) Background: This study aimed to compare the immunogenicity of the mix-and-match CoronaVac/BNT162b2 vaccination to the homologous CoronaVac/CoronaVac regimen. (2) Methods: We conducted a simple-blinded randomized superiority trial to measure SARS-CoV-2 neutralization antibodies and anti-spike receptor binding domain (RBD) IgG concentrations in blood samples of participants who had received the first dose of CoronaVac vaccine followed by a dose of BNT162b2 or CoronaVac vaccine. The primary endpoint for immunogenicity was the serum-neutralizing antibody level with a percentage of inhibition at 90% at 21–35 days after the boost. A difference of 25% between groups was considered clinically relevant. (3) Results: Among the 240 eligible participants, the primary endpoint data were available for 100 participants randomly allocated to the mix-and-match group versus 99 participants randomly allocated to the homologous dose group. The mix-and-match regimen elicited significantly higher levels of neutralizing antibodies (median level of 96%, interquartile range (IQR) (95–97) versus median level of 94%, IQR (81–96) and anti-spike IgG antibodies (median level of 13,460, IQR (2557–29,930) versus median level of 1190, IQR (347–4964) compared to the homologous group. Accordingly, the percentage of subjects with a percentage of neutralizing antibodies > 90% was significantly higher in the mix-and-match group (90.0%) versus the homologous (60.6%). Interestingly, no severe events were reported within 30 days after the second dose of vaccination in both groups. (4) Conclusions: Our data showed the superiority of the mix-and-match CoronaVac/BNT162b2 vaccination compared to the CoronaVac/CoronaVac regimen in terms of immunogenicity, thus constituting a proof-of-concept study supporting the use of inactivated vaccines in a mix-and-match strategy while ensuring good immunogenicity and safety.
Journal Article
A prospective cohort study of Cutaneous Leishmaniasis due to Leishmania major: Dynamics of the Leishmanin skin test and its predictive value for protection against infection and disease
2020
Leishmanin Skin Test (LST) is considered as a useful indicator of past infection by Leishmania parasites. However, the temporal dynamics of a positive LST under different epidemiologic scenarios and whether it relates to the protection against the recurrence of an overt disease are not fully documented.
We report here on a population based prospective study conducted on 2686 individuals living in two foci located in Central Tunisia, to assess over a one-year epidemiologic season, the incidence of Leishmania (L.) major infection and disease and changes in LST reactivity. The two foci were both endemic for Cutaneous Leishmaniasis (CL) due to L. major, but contrasted in their history for this disease (ie: an old focus versus a recent focus). We found that most infections occurred in the new focus (290/1000; 95% CI: 265-315 person-years) with an incidence rate of CL lesions 2.4 times higher than in the old focus. Likewise, the rates of LST reactivity reversion and loss, in the new focus, were 99/1000[38-116] person-years and 14/1000[8-21] person-years, respectively. Loss of LST reactivity was not noticed in the old focus. Interestingly, the incidence rates of symptomatic infection did not differ significantly according to the LST status at enrolment (negative versus positive) between the combined foci and the new one.
Our findings confirm LST as a good tool for assessing L. major cryptic infection. However, the instability of the LST positivity in new foci should be considered as an important confounder of the outcome of this infection when developing a research protocol for vaccine trial.
Journal Article
First report of naturally infected Sergentomyia minuta with Leishmania major in Tunisia
by
Salem, Sadok
,
Yazidi, Rihab
,
Harrabi, Mariem
in
Animals
,
Biomedical and Life Sciences
,
Biomedicine
2015
Background
Many sand fly species are implicated in the transmission cycle of
Leishmania
parasites around the world. Incriminating new sand flies species, as vectors of
Leishmania
is crucial to understanding the parasite–vector transmission cycle in different areas in Tunisia and surrounding countries.
Findings
Seventy-four unfed females belonging to the genera
Sergentomyia
and
Phlebotomus
were collected in South Tunisia between June and November 2014, using sticky papers. PCR-RFLP (Restriction Fragment Length Polymorphism) analysis of the internal transcribed spacer 1 (ITS1) was used for
Leishmania
parasites detection and identification.
Leishmania
(
L.
)
major
(Yakimoff & Shokkor, 1914) was identified within two
Sergentomyia
(
S.
)
minuta
(Rondani, 1843) and one
Phlebotomus papatasi
(Scopoli, 1786).
Conclusion
This is the first report of
L. major
identified from
S. minuta
in Tunisia. This novel finding enhances the understanding of the transmission cycle of
L. major
parasites of cutaneous leishmaniasis in an endemic area in South Tunisia.
Journal Article
Morphological and molecular characterization of Fusarium spp. associated with olive trees dieback in Tunisia
2017
Dieback and wilting symptoms caused by complex soilborne fungi are nowadays the most serious threatening disease affecting olive trees (
Olea europaea
) in Tunisia and presumably in many Mediterranean basin countries
. Fusarium
is one of the important phytopathogenic genera associated with dieback symptoms of olive trees. The objective of the present study was to confirm the pathogenicity of
Fusarium
spp. isolated from several olive-growing areas in Tunisia. According to the pathogenic test done on young olive trees (cv. Chemlali), 23 out of 104 isolates of
Fusarium
spp. were found to be pathogenic and the others were weakly or not pathogenic. The pathogenic
Fusarium
spp. isolates were characterized using molecular methods based on ITS PCR. Isolation results revealed the predominance of
Fusarium solani
(56.5%) and
F. oxysporum
species (21.7%) compared to
F. chalmydosporum
(8.7%),
F. brachygibbosum
(8.7%) and
F. acuminatum
(4.34%). Based on pathogenicity test, disease severity was highly variable among the 23 pathogenic isolates tested (
P
< 0.05) where
F. solani
was the most aggressive dieback agent. To the best of our knowledge, this is the first work that shows that
Fusarium
spp. might be a major agent causing dieback disease of olive trees in Tunisia.
Journal Article
A Longitudinal Study in Tunisia to Assess the Anti-RBD IgG and IgA Responses Induced by three different COVID-19 Vaccine platforms
2024
Background: Vaccination constitutes the best strategy against COVID-19. In Tunisia, seven vaccines standing for the three main platforms, namely RNA, viral vector, and inactivated vaccines, have been used to vaccinate the population at a large scale. This study aimed to assess, in our setting, the kinetics of vaccine-induced anti-RBD IgG and IgA antibody responses.
Methods: Using in-house developed and validated ELISA assays, we measured anti-RBD IgG and IgA serum antibodies in 186 vaccinated workers at the Institut Pasteur de Tunis over 12 months.
Results: We showed that RNA vaccines were the most immunogenic vaccines, as compared to alum-adjuvanted inactivated and viral-vector vaccines, either in SARS-CoV-2-naive or in SARS-CoV-2-experienced individuals. In addition to the IgG antibodies, the vaccination elicited RBD-specific IgAs. Vaccinated individuals with prior SARS-CoV-2 infection exhibited more robust IgG and IgA antibody responses, as compared to SARS-CoV-2-naive individuals.
Conclusions: After following up for 12 months post-immunization, we concluded that the hierarchy between the platforms for anti-RBD antibody-titer dynamics was RNA vaccines, followed by viral-vector and alum-adjuvanted inactivated vaccines.
Journal Article
Tick Infestation and Piroplasm Infection in Barbarine and Queue Fine de l’Ouest Autochthonous Sheep Breeds in Tunisia, North Africa
2021
: As ticks and tick genetically resistant breeds to infestation by ticks may represent an alternative to the overuse of chemical drugs. The aim of this study was to assess if there is the main she in 17 small to middle ty-nine ear-tagged ewes from Barbarine (n=288, 65.6%) and Queue Fine de l’Ouest 34.4%) breeds were examined and sampled each trimester. Ticks were identified to the species level, and piroplasms were detected using PCR that targets a common sequence ARNr18S to both Babesia and animals;91.4% (646/707) of them were were markedly less infested by ticks the Barbarine breed. breed,were detected positive ceptibility of QFO ewes to infestation by ticks and to infection by piroplasms. The QF breed could be raised preferably at high concrete control strategies
Journal Article