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98 result(s) for "Ghosh, Samrat"
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Constitutional isomerism of the linkages in donor–acceptor covalent organic frameworks and its impact on photocatalysis
When new covalent organic frameworks (COFs) are designed, the main efforts are typically focused on selecting specific building blocks with certain geometries and properties to control the structure and function of the final COFs. The nature of the linkage (imine, boroxine, vinyl, etc.) between these building blocks naturally also defines their properties. However, besides the linkage type, the orientation, i.e ., the constitutional isomerism of these linkages, has rarely been considered so far as an essential aspect. In this work, three pairs of constitutionally isomeric imine-linked donor-acceptor (D-A) COFs are synthesized, which are different in the orientation of the imine bonds (D-C=N-A (DCNA) and D-N=C-A (DNCA)). The constitutional isomers show substantial differences in their photophysical properties and consequently in their photocatalytic performance. Indeed, all DCNA COFs show enhanced photocatalytic H 2 evolution performance than the corresponding DNCA COFs. Besides the imine COFs shown here, it can be concluded that the proposed concept of constitutional isomerism of linkages in COFs is quite universal and should be considered when designing and tuning the properties of COFs. Systematic investigation of isomerism in covalent organic frameworks (COFs) can provide key insights into their properties. Here, the authors reveal that the constitutional isomerism of the linkage i.e., linkage orientations distinctly impact COFs’ structural and photophysical properties.
Ultra-fast single-crystal polymerization of large-sized covalent organic frameworks
In principle, polymerization tends to produce amorphous or poorly crystalline materials. Efficiently producing high-quality single crystals by polymerization in solvent remains as an unsolved issue in chemistry, especially for covalent organic frameworks (COFs) with highly complex structures. To produce μm-sized single crystals, the growth time is prolonged to >15 days, far away from the requirements in practical applications. Here, we find supercritical CO 2 (sc-CO 2 ) accelerates single-crystal polymerization by 10,000,000 folds, and produces two-dimensional (2D) COF single crystals with size up to 0.2 mm within 2~5 min. Although it is the fastest single-crystal polymerization, the growth in sc-CO 2 leads to not only the largest crystal size of 2D COFs, but also higher quality with improved photoconductivity performance. This work overcomes traditional concept on low efficiency of single-crystal polymerization, and holds great promise for future applications owing to its efficiency, industrial compatibility, environmental friendliness and universality for different crystalline structures and linkage bonds. Rapid growth of highly crystalline Covalent organic framework (COF) materials remains challenging. Here, the authors accelerate single-crystal polymerization using supercritical CO2 and realize the fabrication of two-dimensional COF single crystals within several minutes.
An anionic two dimensional covalent organic framework from tetratopic borate centres pillared by lithium ions
Non-covalent interactions play an important role for the framework formation of two-dimensional covalent organic frameworks. Until now, π–π interactions and hydrogen bonding are the main reported forces facilitating the stacking of framework layers. Here, we present a two-dimensional anionic covalent organic framework based on tetratopic borate linkages, where layers are connected by ionic interactions between the linkage site and counter cations. The crystalline covalent organic framework is accessed through the formation of an amorphous borate-based polymer and subsequent solvothermal treatment. The progress of crystallization is investigated, revealing the crystallite growth and morphological change from agglomerated dense particles to hollow crystallite spheres. Due to the pillared nature, the crystallites can be exfoliated into nanosheets by sonication of the material in the presence of methanol. The crystallization and ordered arrangement of the lithium ions in the interlayer space is shown to benefit the conductivity tenfold compared to the amorphous material. Non-covalent interactions facilitate the stacking of framework layers in two dimensional covalent organic frameworks playing an important role for the framework formation. Here, the authors describe a covalent organic framework with tetratopic borate linkages whose counter cations promote the framework layer interaction.
Influences of dark energy and dark matter on gravitational time advancement
The effect of dark matter/energy on the gravitational time advancement (negative effective time delay) has been investigated considering a few dark energy/matter models including cosmological constant. It is found that dark energy gives only a (positive) gravitational time delay, irrespective of the position of the observer, whereas a pure Schwarzschild geometry leads to a gravitational time advancement when the observer is situated at a relatively stronger gravitational field point in the light trajectory. Consequently, there will be no time advancement effect at all at radial distances where the gravitational field due to dark energy is stronger than the gravitational field of the Schwarzschild geometry.
Plant development influences dynamic shifts in the root compartment microbiomes of wild and domesticated finger millet cultivars
Background Plant-microbe interactions in the rhizosphere and endosphere are crucial for maintaining plant health and ecosystem dynamics. These interactions are shaped by several factors, including the plant’s developmental stage, domestication, and specific root compartments. Different plant cultivars influence unique microbial communities by secreting root exudates that either support beneficial symbionts or inhibit pathogens. This study examined the microbial community structures in the endosphere and rhizosphere of wild-type finger millet and five domesticated cultivars at two developmental stages. Results Our results revealed that the plant developmental stage, root compartment, and domestication significantly influence the root-associated microbiomes. Interestingly, only about 8% of the core microbiota was consistently shared between the soil and plants, indicating that 92% shifted dynamically depending on plant type and developmental stage. Pseudomonadota , Actinomycedota , and Bacteroidota were the dominant bacterial phyla, while Ascomycota and Basidiomycota were the primary fungal phyla across all samples, displaying distinct abundance patterns. Notably, an increase in Actinomycedota in the endosphere correlated with a reduction in Pseudomonadota . The most significant shifts in microbial community composition occurred in the rhizosphere during the flowering stage, primarily driven by the genus Pseudomonas . These findings demonstrate that plant developmental stages and domestication influence the recruitment of specific microbial taxa to meet the plant’s needs, particularly in various root compartments. This selective recruitment highlights the active role of plants in shaping their microbiomes, providing insights into the potential for manipulating these communities to enhance crop productivity sustainably. Conclusion Our results indicate that both the host developmental stage and domestication significantly influence the assembly and structure of the plant microbiome. Plant root compartments can selectively recruit specific taxa from associated core microbial communities to meet their needs, depending on the plant’s developmental stage and the particular root compartment involved. These findings demonstrate that the deterministic selection pressures exerted by plants during their growth and development greatly affect their microbial communities. This has important implications for developing sustainable farming practices, reducing reliance on chemical fertilizers and pesticides, and enhancing future crop productivity.
Genomic insights and biocontrol potential of ten bacterial strains from the tomato core microbiome
Despite their adverse environmental effects, modern agriculture relies heavily on agrochemicals to manage diseases and pests and enhance plant growth and productivity. Some of these functions could instead be fulfilled by endophytes from the plant microbiota, which have diverse activities beneficial for plant growth and health. We therefore used a microbiome-guided top-down approach to select ten bacterial strains from different taxa in the core microbiome of tomato plants in the production chain for evaluation as potential bioinoculants. High-quality genomes for each strain were obtained using Oxford Nanopore long-read and Illumina short-read sequencing, enabling the dissection of their genetic makeup to identify phyto-beneficial traits. Bacterial strains included both taxa commonly used as biofertilizers and biocontrol agents (i.e. and ) as well as the less studied genera , , , and . When inoculated in the tomato rhizosphere, these strains promoted plant growth and reduced the severity of Fusarium Crown and Root Rot and Bacterial Spot infections. Genome analysis yielded a comprehensive inventory of genes from each strain related to processes including colonization, biofertilization, phytohormones, and plant signaling. Traits directly relevant to fertilization including phosphate solubilization and acquisition of nitrogen and iron were also identified. Moreover, the strains carried several functional genes putatively involved in abiotic stress alleviation and biotic stress management, traits that indirectly foster plant health and growth. This study employs a top-down approach to identify new plant growth-promoting rhizobacteria (PGPRs), offering an alternative to the conventional bottom-up strategy. This method goes beyond the traditional screening of the strains and thus can expand the range of potential bioinoculants available for market application, paving the way to the use of new still underexplored genera.
Comparative transcriptome profiling provides insights into the growth promotion activity of Pseudomonas fluorescens strain SLU99 in tomato and potato plants
The use of biocontrol agents with plant growth-promoting activity has emerged as an approach to support sustainable agriculture. During our field evaluation of potato plants treated with biocontrol rhizobacteria, four bacteria were associated with increased plant height. Using two important solanaceous crop plants, tomato and potato, we carried out a comparative analysis of the growth-promoting activity of the four bacterial strains: Pseudomonas fluorescens SLU99, Serratia plymuthica S412, S. rubidaea AV10, and S. rubidaea EV23. Greenhouse and in vitro experiments showed that P. fluorescens SLU99 promoted plant height, biomass accumulation, and yield of potato and tomato plants, while EV23 promoted growth in potato but not in tomato plants. SLU99 induced the expression of plant hormone-related genes in potato and tomato, especially those involved in maintaining homeostasis of auxin, cytokinin, gibberellic acid and ethylene. Our results reveal potential mechanisms underlying the growth promotion and biocontrol effects of these rhizobacteria and suggest which strains may be best deployed for sustainably improving crop yield.
Unveiling the Variability and Chemical Composition of AL Col
In this study, we present analysis of TESS photometry, spectral energy distribution (SED), high-resolution spectroscopy, and spot modeling of the α2 CVn-type star AL Col (HD 46462). The primary objective is to determine its fundamental physical parameters and investigate its surface activity characteristics. Using TESS short-cadence (120 s) SAP flux, we identified a rotational frequency of 0.09655 d−1 (Prot=10.35733 d). Wavelet analysis reveals that while the amplitudes of the harmonic components vary over time, the strength of the primary rotational frequency remains stable. A SED analysis of multi-band photometric data yields an effective temperature (Teff) of 11,750 K. High-resolution spectroscopic observations covering wavelengthrange 4500–7000 Å provide refined estimates of Teff = 13,814 ± 400 K, logg = 4.09 ± 0.08 dex, and υsini = 16 ± 1 km s−1. Abundance analysis shows solar-like composition of O ii, Mg ii, S ii, and Ca ii, while helium is under-abundant by 0.62 dex. Rare earth elements (REEs) exhibit over-abundances of up to 5.2 dex, classifying the star as an Ap/Bp-type star. AL Col has a radius of R=3.74±0.48R⊙, with its H–R diagram position estimating a mass of M=4.2±0.2M⊙ and an age of 0.12±0.01 Gyr, indicating that the star has slightly evolved from the main sequence. The TESS light curves were modeled using a three-evolving-spot configuration, suggesting the presence of differential rotation. This star is a promising candidate for future investigations of magnetic field diagnostics and the vertical stratification of chemical elements in its atmosphere.
Analysis of genetic diversity of Zymoseptoria tritici populations in central and south-eastern Ethiopia
Septoria tritici blotch (STB), caused by the hemibiotrophic fungus Zymoseptoria tritici , is a serious threat to global wheat production, and a major bottleneck to wheat production in Ethiopia. Accurate identification and analysis of the pathogen’s genetic structure helps to develop robust STB management strategies. This study aimed at molecular identification and genetic structure analysis of 200 isolates of Z. tritici representing six populations in central and south-eastern regions of Ethiopia. A total of 165 isolates were confirmed by Sanger sequencing of the internal transcribed spacer (ITS) region of nuclear DNA (rDNA) region. The pathogen’s genetic structure was further examined using 12 simple sequence repeat (SSR) markers. The microsatellite markers were highly polymorphic and informative, with mean number of alleles (Na), effective alleles (Ne), Nei’s gene diversity of 6.23, 2.90, and 0.59, respectively. Analysis of molecular variance (AMOVA) confirmed the presence of low population differentiation (F ST = 0.02), high gene flow (Nm = 14.7), with 95% of the total genetic variation residing within populations, and leaving only 5% for the among populations. The highest genetic diversity (Number of allele = 9.33, Effective number of allele = 3.4 and Nei’s gene diversity = 0.68) was observed in the Oromia special zone surrounding Finfinnee (OSZ) Z. tritici populations, followed by Arsi and North Shewa populations, indicating that these areas are ideal for multi-location wheat germplasm resistance screening, and also the pathogen genetic and genomic analyses. Cluster analyses did not clearly divide the populations into genetically separate clusters according to their geographic areas of sampling, probably due to high gene flow. The analysis revealed existence of high genetic admixture, and all the individuals shared genomic backgrounds from two subgroups (K=2). Overall, the SSR markers are highly informative and effective genetic tools for unlocking the pathogen’s genetic structure. The Z. tritici populations of central and southeast Ethiopia exhibit high genetic diversity, indicating the need to deploy durable and diverse disease management strategies. North Shewa, OSZ, Arsi and West Arsi administrative zones represent hotspots for genetic and genomic analyses of Z. tritici and excellent locations for host–pathogen interaction studies, and wheat germplasm screening for STB resistance.
The impact of spray-induced gene silencing on cereal phyllosphere microbiota
Background Fusarium head blight (FHB) is a major disease affecting cereal crops including wheat, barley, rye, oats and maize. Its predominant causal agent is the ascomycete fungus Fusarium graminearum , which infects the spikes and thereby reduces grain yield and quality. The frequency and severity of FHB epidemics has increased in recent years, threatening global food security. Spray-induced gene silencing (SIGS) is an alternative technique for tackling this devastating disease through foliar spraying with exogenous double-stranded RNA (dsRNA) to silence specific pathogen genes via RNA interference. This has the advantage of avoiding transgenic approaches, but several aspects of the technology require further development to make it a viable field-level management tool. One such existing knowledge gap is how dsRNA spraying affects the microbiota of the host plants. Results We found that the diversity, structure and composition of the bacterial microbiota are subject to changes depending on dsRNA targeted and host studied, while the fungal microbiota in the phyllosphere remained relatively unchanged upon spraying with dsRNA. Analyses of fungal co-occurrence patterns also showed that F. graminearum established itself among the fungal communities through negative interactions with neighbouring fungi. Through these analyses, we have also found bacterial and fungal genera ubiquitous in the phyllosphere, irrespective of dsRNA treatment. These results suggest that although rarer and less abundant microbial species change upon dsRNA spray, the ubiquitous bacterial and fungal components of the phyllosphere in wheat and barley remain unchanged. Conclusion We show for the first time the effects of exogenous dsRNA spraying on bacterial and fungal communities in the wheat and barley phyllospheres using a high-throughput amplicon sequencing approach. The results obtained further validate the safety and target-specificity of SIGS and emphasize its potential as an environmentally friendly option for managing Fusarium head blight in wheat and barley.