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"Goria, Maria"
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Genetic connectivity and admixture zones shape the spread of African swine fever in wild Boar populations in North-western Italy
2025
Host population genetics can shape disease spread in wildlife, yet it is rarely integrated into epizootic investigations. To explore whether connectivity patterns in wild boar populations may have influenced the spread of African swine fever (ASF) in north-western Italy, we characterised the genetic structure of the local population. Microsatellite genotyping was performed on 578 wild boar sampled from 26 hunting districts across thirteen
loci
and analysed using Bayesian clustering, correspondence analysis and spatial PCA. In parallel, 2,414 ASF detections recorded between December 2021 and March 2025 were examined through retrospective spatiotemporal scan statistics and directional spread analysis. We identified two main genetic clusters, one largely corresponding to Piedmont and the other more prevalent in Liguria regions, with zones of admixture along their border and a connectivity corridor through the Ligurian Apennines. Over the 38-month period, 16 significant ASF clusters were detected. The outbreak spread eastward and north-eastward from the initial focus at the Liguria-Piedmont border. Four clusters showed significant directionality, and recurrent clustering in certain areas suggested local persistence. Notably, several ASF clusters overlapped with genetic admixture zones and connectivity hubs. Our findings suggest two mechanisms underpinning disease spread: short-range transmission within genetically related groups and longer-range movement along ecological corridors. Embedding genetic monitoring into routine surveillance may enhance the effectiveness of ASF control by guiding carcass removal, search efforts and spatial prioritisation toward high-risk transition zones.
Journal Article
Occurrence of Brucella ceti in striped dolphins from Italian Seas
by
Serrecchia, Luigina
,
Pautasso, Alessandra
,
Zoppi, Simona
in
Abscesses
,
Animals
,
Aquatic mammals
2020
Brucella ceti infections have been increasingly reported in cetaceans, although a very limited characterization of Mediterranean Brucella spp. isolates has been previously reported and relatively few data exist about brucellosis among cetaceans in Italy. To address this gap, we studied 8 cases of B. ceti infection in striped dolphins (Stenella coeruleoalba) stranded along the Italian coastline from 2012 to 2018, investigated thanks to the Italian surveillance activity on stranded cetaceans. We focused on cases of stranding in eastern and western Italian seas, occurred along the Apulia (N = 6), Liguria (N = 1) and Calabria (N = 1) coastlines, through the analysis of gross and microscopic findings, the results of microbiological, biomolecular and serological investigations, as well as the detection of other relevant pathogens. The comparative genomic analysis used whole genome sequences of B. ceti from Italy paired with the publicly available complete genomes. Pathological changes consistent with B. ceti infection were detected in the central nervous system of 7 animals, showing non-suppurative meningoencephalitis. In 4 cases severe coinfections were detected, mostly involving Dolphin Morbillivirus (DMV). The severity of B. ceti-associated lesions supports the role of this microbial agent as a primary neurotropic pathogen for striped dolphins. We classified the 8 isolates into the common sequence type 26 (ST-26). Whole genome SNP analysis showed that the strains from Italy clustered into two genetically distinct clades. The first clade comprised exclusively the isolates from Ionian and Adriatic Seas, while the second one included the strain from the Ligurian Sea and those from the Catalonian coast. Plotting these clades onto the geographic map suggests a link between their phylogeny and topographical distribution. These results represent the first extensive characterization of B. ceti isolated from Italian waters reported to date and show the usefulness of WGS for understanding of the evolution of this emerging pathogen.
Journal Article
First Report of Mycobacterium bovis and Nocardia spp. Co-Infection in a Roan Antelope
2026
spp. and
spp. are known etiological agents of granulomatous pulmonary infections in humans and animals; however, co-infections involving these pathogens have not previously been reported in veterinary medicine. This paper describes the first documented case of co-infection with
and
spp. in a captive roan antelope (
). The animal was a 9-year-old female roan antelope from a safari park in northern Italy that died suddenly with a one-month history of weight loss. Post-mortem examination revealed severe, diffuse, chronic granulomatous pneumonia associated with fibrino-granulomatous pleuritis and granulomatous pericarditis. Histologically, multifocal to coalescing necrotizing granulomas were observed, with intralesional acid-fast bacteria. Microbiological culture and biomolecular analyses allowed the identification of
and
spp. in lung tissue samples. The
genome sequence was 98.5% similar to
, a recently discovered species. The findings emphasize the importance of comprehensive diagnostic approaches in animal granulomatous lung disease. Mixed infections in captive wildlife represent a One Health concern, as the potential for zoonotic adaptation and transmission to humans cannot be excluded. Therefore, pathogen surveillance is of particular importance within zoological collections.
Journal Article
Health Status of Stranded Common Bottlenose Dolphins (Tursiops truncatus) and Contamination by Immunotoxic Pollutants: A Threat to the Pelagos Sanctuary—Western Mediterranean Sea
by
Garibaldi, Fulvio
,
Casalone, Cristina
,
Ceciarini, Ilaria
in
Animals
,
Aquatic mammals
,
Atlantic bottlenosed dolphin
2023
Between 2019 and 2021, 21 bottlenose dolphins were found stranded dead along the Ligurian Pelagos Sanctuary coast (Italy). For 11 animals, out of a total of 14 recovered, the cause of death was classified as natural, anthropic, or not determined based on gross and histological pathology and ancillary testing. Hexachlorobenzene (HCB), dichlorodiphenyltrichloroethanes (DDTs), and polychlorinated biphenyls (PCBs) were examined in their blubber, and results were discussed according to their toxicological properties. All specimens showed the following trend: PCBs > DDTs >> HCB, and the levels of cancerogenic, mutagenic, and teratogenic organochlorine compounds (T-OCs) were >50% of total OCs. Immunosuppressant organochlorine compound (IS-OC) levels in 10 out of 11 animals were above 50% of the total OCs. PCB levels always exceeded the threshold of 17 mg/kg lipid weight for PCB-induced adverse health effects. The results suggest that bottlenose dolphins living in the Pelagos Sanctuary undergo a high level of exposure to pathogens and OCs, betraying the designation of the Cetacean Sanctuary and, consequently, of a region created for their conservation. Immune dysfunction and infectious disease susceptibility appear to be highly connected with high levels of OC xenobiotics. These data are useful to understand health and mortality trends in cetacean populations, as well as for developing policies for cetacean conservation and management in this important protected area of the Mediterranean.
Journal Article
Antimicrobial Resistance Genes (ARGs) Monitoring and Gut Microbiota Profiling in Honey Bees from an Intensive Livestock Farming Area in Northwestern Italy
by
Carisio, Luca
,
Beltramo, Chiara
,
Guasco, Cecilia
in
Agricultural industry
,
Analysis
,
Antibiotic resistance
2026
Antimicrobial resistance (AMR) is a growing global concern, exacerbated by the overuse of antibiotics in livestock farming. Honey bees (Apis mellifera), widely used as bioindicators of environmental contamination, may also serve as sentinels for monitoring the environmental spread of antibiotic resistance genes (ARGs). This study investigated the presence of ARGs and the gut microbiota composition of honey bees sampled from 11 apiaries located in a region of Northwestern Italy characterized by intensive livestock farming. PCR and Sanger sequencing analyses revealed a widespread presence of tetracycline resistance genes—particularly tetB and tetC—as well as occasional detection of blaTEM, qnrB, and int1 genes. tetB and tetC were also identified in three bacterial colonies isolated from bee guts, notably in Hafnia spp. 16S rRNA gene sequencing of the gut microbiota revealed dominance of genera such as Bartonella, Snodgrassella, Gilliamella, Bombilactobacillus, and Lactobacillus. Some samples showed shifts in the microbial diversity. The findings confirm the potential of honey bees as bioindicators for environmental AMR surveillance and underscore the need for further research to elucidate correlations between ARG presence and microbial community structure in honey bees from various ecological contexts.
Journal Article
Neuropathological Characterization of Dolphin Morbillivirus Infection in Cetaceans Stranded in Italy
2022
Cetacean morbillivirus (CeMV) is responsible for epidemic and endemic fatalities in free-ranging cetaceans. Neuro-inflammation sustained by CeMV is a leading cause of death in stranded cetaceans. A novel dolphin morbillivirus (DMV) strain of Atlantic origin circulating in Italian waters since early 2016 has caused acute/subacute lesions associated with positive immunolabelling of the virus. To date, myelin damage has not been fully documented and investigated in cetaceans. This study describes neuropathological findings in the brain tissue of 31 cetaceans found stranded along the Italian coastline and positive for DMV infection on molecular testing. Cell changes in the areas of myelinopathy were revealed by double indirect immunofluorescence. The most frequent DMV-associated lesions were astro-microgliosis, neuronal necrosis, spongiosis, malacia, and non-suppurative meningoencephalitis. Myelin reduction and areas of demyelination were revealed by means of a specific myelin biomarker. Morbilliviral antigen immunolabelling was mainly observed in neurons and microglial cells, in association with a marked activation of microglia and astrocytes. These findings extend our knowledge of DMV-associated brain lesions and shed light on their pathogenesis.
Journal Article
Anthropic Pressure on Cetaceans Stranded Along the Ligurian Coast Within the Pelagos Sanctuary: A Case Series
by
Garibaldi, Fulvio
,
Crescio, Maria Ines
,
Zoppi, Simona
in
Animals
,
anthropic pressure
,
Bacterial infections
2024
Data collected by C. Re. Di. Ma over a 3-year period (2020–2022) were considered to assess anthropic pressure on cetaceans living in the Ligurian sea. Out of a total of 37 stranded cetaceans, a complete post mortem examination was performed on 23 cases. Of these, 14 were further selected considering at least one of these conditions: (i) confirmed, probable, or suspected interaction with fishing activities through the application of a standardized diagnostic framework (7/14; 50%), (ii) toxicological stress through the evaluation of OCs hazardous levels (14/14; 100%), and (iii) terrestrial pathogen-associated disease (systemic infection and/or associated lesions) (7/14; 50%). For 9 animals out of a total of 14 selected, the cause of death was classified as natural (6/14; 42,8%), anthropic (3/14; 21,4%), or not determined (5/14; 35,7%) based on gross and histological pathology and ancillary testing. These findings extend our knowledge of the anthropic pressure to which cetaceans stranded along the Ligurian coastline are subjected from a multidisciplinary point of view.
Journal Article
Comparative Evaluation of qPCR and Digital PCR for the Detection of Nosema ceranae in Honey Bees
by
Mogliotti, Paola
,
Guasco, Cecilia
,
Ghisellini, Paola
in
Agricultural ecosystems
,
Apiculture
,
Apis mellifera
2025
honey bees are keystone species for agriculture and global biodiversity, yet their populations are increasingly affected by multiple stressors, including the microsporidian parasite
. Early and accurate detection of this pathogen is critical to prevent colony losses and sustain pollination services. This study compares qPCR and ddPCR for detecting
in bees and hive debris. qPCR is suitable for routine screening, whereas ddPCR offers higher sensitivity and precise quantification. The high diagnostic concordance between the two assays in bee samples, coupled with ddPCR's enhanced detection capability in debris, underscores their complementary value in apicultural monitoring. This study provides the first experimental comparison between qPCR and ddPCR applied to matched field samples of bees and hive debris, establishing a sensitive and practical diagnostic framework for
surveillance. The findings support improved diagnostic accuracy and early detection in apicultural health programs.
Journal Article
Epidemiological and genetic analysis of Cetacean Morbillivirus circulating on the Italian coast between 2018 and 2021
2023
Cetacean morbillivirus (CeMV) has caused several outbreaks, unusual mortality events, and interepidemic single-lethal disease episodes in the Mediterranean Sea. Since 2012, a new strain with a northeast (NE) Atlantic origin has been circulating among Mediterranean cetaceans, causing numerous deaths. The objective of this study was to determine the prevalence of CeMV in cetaceans stranded in Italy between 2018 and 2021 and characterize the strain of CeMV circulating. Out of the 354 stranded cetaceans along the Italian coastlines, 113 were CeMV-positive. This prevalence (31.9%) is one of the highest reported without an associated outbreak. All marine sectors along the Italian coastlines, except for the northern Adriatic coast, reported a positive molecular diagnosis of CeMV. In one-third of the CeMV-positive cetaceans submitted to a histological evaluation, a chronic form of the infection (detectable viral antigen, the absence of associated lesions, and concomitant coinfections) was suspected. Tissues from 24 animals were used to characterize the strain, obtaining 57 sequences from phosphoprotein, nucleocapsid, and fusion protein genes, which were submitted to GenBank. Our sequences showed the highest identity with NE-Atlantic strain sequences, and in the phylogenetic study, they clustered together with them. Regarding age and species, most of these individuals were adults (17/24, 70.83%) and striped dolphins (19/24, 79.16%). This study improves our understanding on the NE-Atlantic CeMV strain in the Italian waters, supporting the hypothesis of an endemic circulation of the virus in this area; however, additional studies are necessary to deeply comprehend the epidemiology of this strain in the Mediterranean Sea.
Journal Article
Antimicrobial and Immunomodulatory Potential of Cow Colostrum Extracellular Vesicles (ColosEVs) in an Intestinal In Vitro Model
by
Zoppi, Simona
,
Mecocci, Samanta
,
Chiaradia, Elisabetta
in
Animal lactation
,
Antibiotics
,
antimicrobial
2022
Extracellular Vesicles (EVs) are nano-sized double-lipid-membrane-bound structures, acting mainly as signalling mediators between distant cells and, in particular, modulating the immune response and inflammation of targeted cells. Milk and colostrum contain high amounts of EVs that could be exploited as alternative natural systems in antimicrobial fighting. The aim of this study is to evaluate cow colostrum-derived EVs (colosEVs) for their antimicrobial, anti-inflammatory and immunomodulating effects in vitro to assess their suitability as natural antimicrobial agents as a strategy to cope with the drug resistance problem. ColosEVs were evaluated on a model of neonatal calf diarrhoea caused by Escherichia coli infection, a livestock disease where antibiotic therapy often has poor results. Colostrum from Piedmontese cows was collected within 24 h of calving and colosEVs were immediately isolated. IPEC-J2 cell line was pre-treated with colosEVs for 48 h and then infected with EPEC/NTEC field strains for 2 h. Bacterial adherence and IPEC-J2 gene expression analysis (RT-qPCR) of CXCL8, DEFB1, DEFB4A, TLR4, TLR5, NFKB1, MYD88, CGAS, RIGI and STING were evaluated. The colosEVs pre-treatment significantly reduced the ability of EPEC/NTEC strains to adhere to cell surfaces (p = 0.006), suggesting a role of ColosEVs in modulating host–pathogen interactions. Moreover, our results showed a significant decrease in TLR5 (p < 0.05), CGAS (p < 0.05) and STING (p < 0.01) gene expression in cells that were pre-treated with ColosEVs and then infected, thus highlighting a potential antimicrobial activity of ColosEVs. This is the first preliminarily study investigating ColosEV immunomodulatory and anti-inflammatory effects on an in vitro model of neonatal calf diarrhoea, showing its potential as a therapeutic and prophylactic tool.
Journal Article