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Induced pluripotent stem cells (iPSCs) are potential cell sources for regenerative medicine. The iPSCs exhibit a preference for lineage differentiation to the donor cell type indicating the existence of memory of origin. Although the intrinsic effect of the donor cell type on differentiation of iPSCs is well recognized, whether disease-specific factors of donor cells influence the differentiation capacity of iPSC remains unknown. Using viral based reprogramming, we demonstrated the generation of iPSCs from chondrocytes isolated from healthy (AC-iPSCs) and osteoarthritis cartilage (OA-iPSCs). These reprogrammed cells acquired markers of pluripotency and differentiated into uncommitted mesenchymal-like progenitors. Interestingly, AC-iPSCs exhibited enhanced chondrogenic potential as compared OA-iPSCs and showed increased expression of chondrogenic genes. Pan-transcriptome analysis showed that chondrocytes derived from AC-iPSCs were enriched in molecular pathways related to energy metabolism and epigenetic regulation, together with distinct expression signature that distinguishes them from OA-iPSCs. Our molecular tracing data demonstrated that dysregulation of epigenetic and metabolic factors seen in OA chondrocytes relative to healthy chondrocytes persisted following iPSC reprogramming and differentiation toward mesenchymal progenitors. Our results suggest that the epigenetic and metabolic memory of disease may predispose OA-iPSCs for their reduced chondrogenic differentiation and thus regulation at epigenetic and metabolic level may be an effective strategy for controlling the chondrogenic potential of iPSCs.

Insights from long-term subsistence fisheries data can improve our understanding of the population-specific responses of Arctic charr, Salvelinus alpinus, to environmental conditions. In this study, associations were found between temporal environmental variation and Arctic charr length- and weight-based growth using data from fish captured in the Hornaday River fishery. Overall, spring precipitation and summer air temperature appear to be the most important environmental influences on Arctic charr probably because of their respective impacts on the opportunities for acquiring surplus energy for growth. A pattern of decreasing age-related importance of temperature and increasing age-related importance of precipitation suggested that the coupling between growth and environmental effects varied by life-period. The changing prominence of each variable seems to result from the shift in apportioning energy for increases in length to increases in weight, likely as a result of the onset of maturation. The linkage of population characteristics to environmental conditions provides a baseline reference against which future data may be compared to determine the significance of any observed changes in population characteristics as a result of continuing ecological change in the north.

Background In lake ecosystems, predatory fish can move and forage across both nearshore and offshore habitats. This coupling of sub-habitats, which is important in stabilizing lake food webs, has largely been assessed from a dietary perspective and has not included movement data. As such, empirical estimates of the seasonal dynamics of these coupling movements by fish are rarely quantified, especially for northern lakes. Here we collect fine-scale fish movement data on Lake Trout ( Salvelinus namaycush ), a predatory cold-water fish known to link nearshore and offshore habitats, to test for seasonal drivers of activity, habitat use and diet in a subarctic lake. Methods We used an acoustic telemetry positioning array to track the depth and spatial movements of 43 Lake Trout in a subarctic lake over two years. From these data we estimated seasonal 50% home ranges, movements rates, tail beat activity, depth use, and nearshore habitat use. Additionally, we examined stomach contents to quantify seasonal diet. Data from water temperature and light loggers were used to monitor abiotic lake conditions and compare to telemetry data. Results Lake Trout showed repeatable seasonal patterns of nearshore habitat use that peaked each spring and fall, were lower throughout the long winter, and least in summer when this habitat was above preferred temperatures. Stomach content data showed that Lake Trout acquired the most nearshore prey during the brief spring season, followed by fall, and winter, supporting telemetry results. Activity rates were highest in spring when feeding on invertebrates and least in summer when foraging offshore, presumably on large-bodied prey fish. High rates of nearshore activity in fall were associated with spawning. Nearshore habitat use was widespread and not localized to specific regions of the lake, although there was high overlap of winter nearshore core areas between years. Conclusions We provide empirical demonstrations of the seasonal extent to which a mobile top predator links nearshore and offshore habitats in a subarctic lake. Our findings suggest that the nearshore is an important foraging area for Lake Trout for much of the year, and the role of this zone for feeding should be considered in addition to its traditional importance as spawning habitat.

The pattern of neutrino oscillations changes when one considers these particles evolving as an open quantum system. In this article we derive seven possibilities that change the two-generation neutrino survival probability due to quantum dissipation and decoherence. We find entirely original probabilities assuming that these effects can be parametrized by the addition of only one phenomenological constant keeping complete positivity. We observe that a relaxation effect of the system shows an unusual mechanism of flavor conversion, the appearance of CP-violation effects for Majorana neutrinos, besides an appreciable change in the behavior of high energy neutrinos.

Reduced body size and accelerated life cycle due to warming are considered major ecological responses to climate change with fitness costs at the individual level. Surprisingly, we know little about how relevant ecological factors can alter these life history trade‐offs and their consequences for individual fitness. Here, we show that food modulates temperature‐dependent effects on body size in the water flea Daphnia magna and interacts with temperature to affect life history parameters. We exposed 412 individuals to a factorial manipulation of food abundance and temperature, tracked each reproductive event, and took daily measurements of body size from each individual. High temperature caused a reduction in maximum body size in both food treatments, but this effect was mediated by food abundance, such that low food conditions resulted in a reduction of 20% in maximum body size, compared with a reduction of 4% under high food conditions. High temperature resulted in an accelerated life cycle, with pronounced fitness cost at low levels of food where only a few individuals produced a clutch. These results suggest that the mechanisms affecting the trade‐off between fast growth and final body size are food‐dependent, and that the combination of low levels of food and high temperature could potentially threaten viability of ectotherms. Food modulates temperature‐dependent effects on body size in the water flea Daphnia magna and interacts with temperature to affect life history parameters.

Three developmental stages of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann) (Diptera: Tephritidae), can be found in the soil (late third instar larvae, pupae, and teneral adults). These stages are susceptible to predation by generalist ground-dwelling predators. Our objectives have been to investigate the association between ground cover management (bare soil, a seeded cover of Festuca arundinacea and a mulch of straw), the emergence success of C. capitata , and the activity density of the most important groups of ground-dwelling predators (spiders, beetles, ants and earwigs). As expected, C. capitata emergence was lower in a seeded cover of Festuca arundinacea (FA) and a mulch of straw (M) (10.2%) relative to bare soil (BS) (13.2%). This was related to higher diversity and activity density of ground-dwelling predators in FA and M compared to BS. The contribution of the ground-dwelling predators considered in this study to this reduction highlights the key role of beetles, earwigs and, to a lesser extent, ants, while the contribution of the most abundant group of ground-dwelling predators, spiders, remains unclear. Ground covers appear as a strong and sustainable conservation biological control method that should be taken into consideration for the management of C. capitata populations.

There is a pressing need to understand how ecosystems will respond to climate change. To date, no long-term empirical studies have confirmed that fish populations exhibit adaptive foraging behavior in response to temperature variation and the potential implications this has on fitness. Here, we use an unparalleled 11-y acoustic telemetry, stable isotope, and mark–recapture dataset to test if a population of lake trout (Salvelinus namaycush), a coldwater stenotherm, adjusted its use of habitat and energy sources in response to annual variations in lake temperatures during the open-water season and how these changes translated to the growth and condition of individual fish. We found that climate influenced access to littoral regions in spring (data from telemetry), which in turn influenced energy acquisition (data from isotopes), and growth (mark–recapture data). In more stressful years, those with shorter springs and longer summers, lake trout had reduced access to littoral habitat and assimilated less littoral energy, resulting in reduced growth and condition. Annual variation in prey abundance influenced lake trout foraging tactics (i.e., the balance of the number and duration of forays) but not the overall time spent in littoral regions. Lake trout greatly reduced their use of littoral habitat and occupied deep pelagic waters during the summer. Together, our results provide clear evidence that climate-mediated behavior can influence the dominant energy pathways of top predators, with implications ranging from individual fitness to food web stability.

Teleost fishes occupy a range of ecosystem, and habitat types subject to large seasonal fluctuations. Temperate fishes, in particular, survive large seasonal shifts in temperature, light availability, and access to certain habitats. Mobile species such as lake trout (Salvelinus namaycush) can behaviorally respond to seasonal variation by shifting their habitat deeper and further offshore in response to warmer surface water temperatures during the summer. During cooler seasons, the use of more structurally complex nearshore zones by lake trout could increase cognitive demands and potentially result in a larger relative brain size during those periods. Yet, there is limited understanding of how such behavioral responses to a seasonally shifting environment might shape, or be shaped by, the nervous system. Here, we quantified variation in relative brain size and the size of five externally visible brain regions in lake trout, across six consecutive seasons in two different lakes. Acoustic telemetry data from one of our study lakes were collected during the study period from a different subset of individuals and used to infer relationships between brain size and seasonal behaviors (habitat use and movement rate). Our results indicated that lake trout relative brain size was larger in the fall and winter compared with the spring and summer in both lakes. Larger brains coincided with increased use of nearshore habitats and increased horizontal movement rates in the fall and winter based on acoustic telemetry. The telencephalon followed the same pattern as whole brain size, while the other brain regions (cerebellum, optic tectum, olfactory bulbs, and hypothalamus) were only smaller in the spring. These findings provide evidence that flexibility in brain size could underpin shifts in behavior, which could potentially subserve functions associated with differential habitat use during cold and warm seasons and allow fish to succeed in seasonally variable environments. Seasonal variation in relative brain region size in lake trout. The curves show estimated marginal means and 95% confidence intervals (shaded ribbons) of telencephalon (a), cerebellum (b), optic tectum (c), olfactory bulbs (d), and hypothalamus (e) volumes. Letters denote significant seasonal differences obtained by Tukey's test.

SUMO-binding proteins interact with SUMO modified proteins to mediate a wide range of functional consequences. Here, we report the identification of a new SUMO-binding protein, ZNF261. Four human proteins including ZNF261, ZNF198, ZNF262, and ZNF258 contain a stretch of tandem zinc fingers called myeloproliferative and mental retardation (MYM)-type zinc fingers. We demonstrated that MYM-type zinc fingers from ZNF261 and ZNF198 are necessary and sufficient for SUMO-binding and that individual MYM-type zinc fingers function as SUMO-interacting motifs (SIMs). Our binding studies revealed that the MYM-type zinc fingers from ZNF261 and ZNF198 interact with the same surface on SUMO-2 recognized by the archetypal consensus SIM. We also present evidence that MYM-type zinc fingers in ZNF261 contain zinc, but that zinc is not required for SUMO-binding. Immunofluorescence microscopy studies using truncated fragments of ZNF198 revealed that MYM-type zinc fingers of ZNF198 are necessary for localization to PML-nuclear bodies (PML-NBs). In summary, our studies have identified and characterized the SUMO-binding activity of the MYM-type zinc fingers in ZNF261 and ZNF198.

We conducted a multi-year acoustic telemetry study of lake trout (Salvelinus namaycush (Walbaum, 1792)) in a small subarctic lake to investigate depth and temperature occupancy, and vertical activity across seasons (summer, fall, and winter), diel periods (day, twilight, and night), and during summer periods of 24 h light (day and twilight). Analyses using generalized additive mixed models revealed a high degree of individual variation in depth occupancy independent of the factors hour of day, season, and diel period, whereas temperature occupancy and vertical activity were explained using the three combined factors. Habitats occupied were typically 9–20 m and 6–9.5 °C in summer, 1–3 m and 2–15 °C in fall during presumed spawning, and ≤6 m and <3 °C in winter. Lake trout exhibited partial diel migration where individuals displayed a variety of vertical migratory directions within and among seasons or diel period, including during periods of 24 h light. Fish were most vertically active during periods of daylight and in fall. During 24 h light, some lake trout performed crepuscular movements, whereas individual behaviour best explained modelled depth and temperature occupancy and vertical activity. The variety of vertical patterns among individuals and seasons suggests multifactor proximate causes of partial diel migration and crepuscular movements.