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result(s) for
"Han, Shaoyu"
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Monitoring Key Wheat Growth Variables by Integrating Phenology and UAV Multispectral Imagery Data into Random Forest Model
by
Li, Zhenhai
,
Ma, Xinming
,
Cheng, Jinpeng
in
aboveground biomass
,
Agricultural production
,
Algorithms
2022
Rapidly developing remote sensing techniques are shedding new light on large-scale crop growth status monitoring, especially in recent applications of unmanned aerial vehicles (UAVs). Many inversion models have been built to estimate crop growth variables. However, the present methods focused on building models for each single crop stage, and the features generally used in the models are vegetation indices (VI) or joint VI with data derived from UAV-based sensors (e.g., texture, RGB color information, or canopy height). It is obvious these models are either limited to a single stage or have an unstable performance across stages. To address these issues, this study selected four key wheat growth parameters for inversion: above-ground biomass (AGB), plant nitrogen accumulation (PNA) and concentration (PNC), and the nitrogen nutrition index (NNI). Crop data and multispectral data were acquired in five wheat growth stages. Then, the band reflectance and VI were obtained from multispectral data, along with the five stages that were recorded as phenology indicators (PIs) according to the stage of Zadok’s scale. These three types of data formed six combinations (C1–C6): C1 used all of the band reflectances, C2 used all VIs, C3 used bands and VIs, C4 used bands and PIs, C5 used VIs and PIs, and C6 used bands, Vis, and PIs. Some of the combinations were integrated with PIs to verify if PIs can improve the model accuracy. Random forest (RF) was used to build models with combinations of different parameters and evaluate the feature importance. The results showed that all models of different combinations have good performance in the modeling of crop parameters, such as R2 from 0.6 to 0.79 and NRMSE from 10.51 to 15.83%. Then, the model was optimized to understand the importance of PIs. The results showed that the combinations that integrated PIs showed better estimations and the potential of using PIs to minimize features while still achieving good predictions. Finally, the varied model results were evaluated to analyze their performances in different stages or fertilizer treatments. The results showed the models have good performances at different stages or treatments (R2 > 0.6). This paper provides a reference for monitoring and estimating wheat growth parameters based on UAV multispectral imagery and phenology information.
Journal Article
Estimation of Soybean Yield by Combining Maturity Group Information and Unmanned Aerial Vehicle Multi-Sensor Data Using Machine Learning
by
Ren, Pengting
,
Zhao, Chunjiang
,
Chen, Riqiang
in
Accuracy
,
Agricultural production
,
Algorithms
2023
Accurate and rapid estimation of the crop yield is essential to precision agriculture. Critical to crop improvement, yield is a primary index for selecting excellent genotypes in crop breeding. Recently developed unmanned aerial vehicle (UAV) platforms and advanced algorithms can provide powerful tools for plant breeders. Genotype category information such as the maturity group information (M) can significantly influence soybean yield estimation using remote sensing data. The objective of this study was to improve soybean yield prediction by combining M with UAV-based multi-sensor data using machine learning methods. We investigated three types of maturity groups (Early, Median and Late) of soybean, and collected the UAV-based hyperspectral and red–green–blue (RGB) images at three key growth stages. Vegetation indices (VI) and texture features (Te) were extracted and combined with M to predict yield using partial least square regression (PLSR), Gaussian process regression (GPR), random forest regression (RFR) and kernel ridge regression (KRR). The results showed that (1) the method of combining M with remote sensing data could significantly improve the estimation performances of soybean yield. (2) The combinations of three variables (VI, Te and M) gave the best estimation accuracy. Meanwhile, the flowering stage was the optimal single time point for yield estimation (R2 = 0.689, RMSE = 408.099 kg/hm2), while using multiple growth stages produced the best estimation performance (R2 = 0.700, RMSE = 400.946 kg/hm2). (3) By comparing the models constructed by different algorithms for different growth stages, it showed that the models built by GPR showed the best performances. Overall, the results of this study provide insights into soybean yield estimation based on UAV remote sensing data and maturity information.
Journal Article
Maize Ear Height and Ear–Plant Height Ratio Estimation with LiDAR Data and Vertical Leaf Area Profile
2023
Ear height (EH) and ear–plant height ratio (ER) are important agronomic traits in maize that directly affect nutrient utilization efficiency and lodging resistance and ultimately relate to maize yield. However, challenges in executing large-scale EH and ER measurements severely limit maize breeding programs. In this paper, we propose a novel, simple method for field monitoring of EH and ER based on the relationship between ear position and vertical leaf area profile. The vertical leaf area profile was estimated from Terrestrial Laser Scanner (TLS) and Drone Laser Scanner (DLS) data by applying the voxel-based point cloud method. The method was validated using two years of data collected from 128 field plots. The main factors affecting the accuracy were investigated, including the LiDAR platform, voxel size, and point cloud density. The EH using TLS data yielded R2 = 0.59 and RMSE = 16.90 cm for 2019, R2 = 0.39 and RMSE = 18.40 cm for 2021. In contrast, the EH using DLS data had an R2 = 0.54 and RMSE = 18.00 cm for 2019, R2 = 0.46 and RMSE = 26.50 cm for 2021 when the planting density was 67,500 plants/ha and below. The ER estimated using 2019 TLS data has R2 = 0.45 and RMSE = 0.06. In summary, this paper proposed a simple method for measuring maize EH and ER in the field, the results will also offer insights into the structure-related traits of maize cultivars, further aiding selection in molecular breeding.
Journal Article
Transfer-Learning-Based Approach for Yield Prediction of Winter Wheat from Planet Data and SAFY Model
by
Li, Zhenhai
,
Song, Xiaoyu
,
Chen, Jingli
in
aboveground dry biomass
,
Agricultural production
,
Agriculture
2022
Crop production is one of the major interactions between humans and the natural environment, in the process, carbon is translocated cyclically inside the ecosystem. Data assimilation algorithm has advantages in mechanism and robustness in yield estimation, however, the computational efficiency is still a major obstacle for widespread application. To address the issue, a novel hybrid method based on the combination of the Crop Biomass Algorithm of Wheat (CBA-Wheat) to the Simple Algorithm For Yield (SAFY) model and the transfer learning method was proposed in this paper, which enables winter wheat yield estimation with acceptable accuracy and calculation efficiency. The transfer learning techniques learn the knowledge from the SAFY model and then use the knowledge to predict wheat yield. The main results showed that: (1) The comparison using CBA-Wheat between measured AGB and predicted AGB all reveal a good correlation with R2 of 0.83 and RMSE of 1.91 t ha−1, respectively; (2) The performance of yield prediction was as follows: transfer learning method (R2 of 0.64, RMSE of 1.05 t ha−1) and data assimilation (R2 of 0.64, RMSE of 1.01 t ha−1). At the farm scale, the two yield estimation models are still similar in performance with RMSE of 1.33 t ha−1 for data assimilation and 1.13 t ha−1 for transfer learning; (3) The time consumption of transfer learning with complete simulation data set is significantly lower than that of the other two yield estimation tests. The number of pixels to be simulated was about 16,000, and the computational efficiency of the data assimilation algorithm and transfer learning without complete simulation datasets. The transfer learning model shows great potential in improving the efficiency of production estimation.
Journal Article
Apiin Promotes Healthy Aging in C. elegans Through Nutritional Activation of DAF-16/FOXO, Enhancing Fatty Acid Catabolism and Oxidative Stress Resistance
2025
Apiin, a natural flavonoid sourced from parsley, demonstrates antioxidant properties; however, its specific anti-aging effects have yet to be investigated in
(
). This research utilized
models to examine the anti-aging effects of apiin and the underlying mechanisms. The findings indicated that 100 μg/mL apiin extended the mean lifespan of
by 26.70%. Furthermore, apiin improved age-related characteristics in
, such as reducing intestine lipofuscin accumulation and increasing head thrashes and body bends. Additionally, apiin significantly improved stress resistance under thermal, ultraviolet, and oxidative stress conditions. Transcriptomic analysis revealed that apiin induced the differential expression of genes related to fatty acid metabolism, lipid catabolism, and oxidoreductase activity in
. Metabolomic data further corroborated the modulation of fatty acid metabolic processes by apiin. Biochemical assays, including lipid staining, triglyceride quantification, and measurements of antioxidant enzyme activity, demonstrated a decrease in lipid content and an enhancement in antioxidant capacity in
treated with apiin. Moreover, apiin promoted the nuclear translocation of DAF-16 and upregulated key longevity-associated genes, including
,
,
, and
. These results indicate that apiin mitigates aging in
through mechanisms involving the activation of DAF-16 and the regulation of lipid metabolism and oxidative stress responses. Our findings underscore the potential of apiin as a natural therapeutic agent for aging and associated metabolic disorders.
Journal Article
Automatic detection and counting of wheat seedling based on unmanned aerial vehicle images
2025
Wheat is an important food crop, wheat seedling count is very important to estimate the emergence rate and yield prediction. Timely and accurate detection of wheat seedling count is of great significance for field management and variety breeding. In actual production, the method of artificial field investigation and statistics of wheat seedlings is time-consuming and laborious. Aiming at the problems of small targets, dense distribution and easy occlusion of wheat seedling in the field, a wheat seedling number detection model (DM_IOC_fpn) combining local and global features was proposed in this study. Firstly, the wheat seedling image is preprocessed, and the wheat seedling dataset is built by using the point annotation method. Secondly, the density enhanced encoder module is introduced to improve the network structure and extract local and global contextual feature information of wheat seedling. Finally, the total loss function is constructed by introducing counting loss, classification loss, and regression loss to optimize the model, so as to enable accurate judgment of wheat seedling position and category information. Experiment on self-built dataset have shown that the root mean square error (RMSE) and mean absolute error (MAE) of DM_IOC_fpn were 2.91 and 2.23, respectively, which were 1.78 and 1.04 lower than the original IOCFormer. Compared with the current mainstream object detection models, DM_IOC_fpn has better counting performance. DM_IOC_fpn can accurately detect the number of small target wheat seedling, and better solve the problem of occlusion and overlapping of wheat seedling, so as to achieve the accurate detection of wheat seedling, which provides important theoretical and technical support for automatic counting of wheat seedlings and yield prediction in complex field environment.
Journal Article
Analysis of the relationship between shorter sleep duration and wrist fractures: based on NHANES
2024
Background
Wrist fracture is one of the common limb fractures. Its incidence rate increases with age and osteoporosis. Nowadays, Sleep health is increasingly valued, but the relationship between wrist fractures and sleep time is not yet clear.
Methods
Data in this study were collected and screened from the NHANES from 2005 to 2010 and 2013 to 2014. The variables were extracted from interviews and compared between the wrist fractures and the sleep duration. The data was analyzed by weighted multivariate logistic regression.
Results
After excluding individuals who were not eligible and had invalid data, we finally identified 1835 participants for inclusion in this study. We found a negative association between the sleep duration and the fractured of the wrist (OR = 1.027,95% CI (1.027, 1.028),
P
< 0.00001).
Conclusion
This study demons that the association between the sleep duration and the fractures of the wrist is significant. Our findings provide a better understanding of the relationship between sleep duration and wrist fractures. This study may help us reducing the incidence of wrist fractures in the population based on healthy sleep management in the future, and improve the quality of life of middle-aged and elderly patients. Provide evidence for clinical patients to manage healthy sleep.
Journal Article
Comparative analysis of the parapatellar and subpatellar approaches in reducing peripheral knee pain post-intramedullary tibial fracture surgery
2025
Introduction
Intramedullary tibial nailing is a standard treatment for tibial shaft fractures. Postoperative knee pain significantly impacts functional recovery; however, studies on this issue are limited. This study evaluated the effect of the parapatellar approach for intramedullary nailing on postoperative knee pain.
Materials and methods
A total of 29 patients with tibial shaft fractures treated with intramedullary nails from March 2019 to January 2022 were divided into two groups based on the surgical approach: the semi-extended lateral parapatellar approach and the conventional subpatellar ligament split approach. Recorded metrics included operation time, intraoperative fluoroscopy count, intraoperative bleeding volume, Visual Analog Scale (VAS) scores for knee pain at 24 h, 72 h, 1 week, and 1 month postoperatively, fracture healing time and Lysholm knee functional scores at 12 months.
Results
Both groups completed the operation without significant differences in operation time, intraoperative bleeding, fracture healing time, or intraoperative fluoroscopy (
P
> 0.05). The parapatellar group showed significantly better VAS scores for knee pain at 24 h, 72 h, and 1 week postoperatively compared to the control group (
P
< 0.05), with no significant difference at 1 month. After 12 months, Lysholm scores indicated no significant differences in knee support, locking, and swelling (
P
> 0.05); however, the parapatellar group showed significant improvements in lameness, instability, stair climbing, squatting, and pain (
P
< 0.05). Overall, the parapatellar group outperformed the control group (
P
= 0.01). Additionally, long-term follow-up revealed potential advantages of the parapatellar approach in improving long-term functional outcomes.
Conclusions
Using the parapatellar approach for tibial intramedullary nailing avoids splitting the patellar ligament and entering the joint cavity, minimizing knee joint impact and effectively reducing postoperative knee pain, with potential benefits in long-term functional recovery.
Journal Article
Mapping Fruit-Tree Plantation Using Sentinel-1/2 Time Series Images with Multi-Index Entropy Weighting Dynamic Time Warping Method
by
Xu, Weimeng
,
Zhao, Fa
,
Cheng, Jinpeng
in
Accuracy
,
Agricultural production
,
Artificial satellites in remote sensing
2024
Plantation distribution information is of great significance to the government’s macro-control, optimization of planting layout, and realization of efficient agricultural production. Existing studies primarily relied on high spatiotemporal resolution remote sensing data to address same-spectrum, different-object classification by extracting phenological information from temporal imagery. However, the classification problem of orchard or artificial forest, where the spectral and textural features are similar and their phenological characteristics are alike, still presents a substantial challenge. To address this challenge, we innovatively proposed a multi-index entropy weighting DTW method (ETW-DTW), building upon the traditional DTW method with single-feature inputs. In contrast to previous DTW classification approaches, this method introduces multi-band information and utilizes entropy weighting to increase the inter-class distances. This allowed for accurate classification of orchard categories, even in scenarios where the spectral textures were similar and the phenology was alike. We also investigated the impact of fusing optical and Synthetic Aperture Radar (SAR) data on the classification accuracy. By combining Sentinel-1 and Sentinel-2 time series imagery, we validated the enhanced classification effectiveness with the inclusion of SAR data. The experimental results demonstrated a noticeable improvement in orchard classification accuracy under conditions of similar spectral characteristics and phenological patterns, providing comprehensive information for orchard mapping. Additionally, we further explored the improvement in results based on two different parcel-based classification strategies compared to pixel-based classification methods. By comparing the classification results, we found that the parcel-based averaging method has advantages in clearly defining orchard boundaries and reducing noise interference. In conclusion, the introduction of the ETW-DTW method is of significant practical importance in addressing the challenge of same-spectrum, different-object classification. The obtained orchard distribution can provide valuable information for the government to optimize the planting structure and layout and regulate the macroeconomic benefits of the fruit industry.
Journal Article
Short and Medium-Term Prediction of Winter Wheat NDVI Based on the DTW–LSTM Combination Method and MODIS Time Series Data
2021
The normalized difference vegetation index (NDVI) is an important agricultural parameter that is closely correlated with crop growth. In this study, a novel method combining the dynamic time warping (DTW) model and the long short-term memory (LSTM) deep recurrent neural network model was developed to predict the short and medium-term winter wheat NDVI. LSTM is well-suited for modelling long-term dependencies, but this method may be susceptible to overfitting. In contrast, DTW possesses good predictive ability and is less susceptible to overfitting. Therefore, by utilizing the combination of these two models, the prediction error caused by overfitting is reduced, thus improving the final prediction accuracy. The combined method proposed here utilizes the historical MODIS time series data with an 8-day time resolution from 2015 to 2020. First, fast Fourier transform (FFT) is used to decompose the time series into two parts. The first part reflects the inter-annual and seasonal variation characteristics of winter wheat NDVI, and the DTW model is applied for prediction. The second part reflects the short-term change characteristics of winter wheat NDVI, and the LSTM model is applied for prediction. Next, the results from both models are combined to produce a final prediction. A case study in Hebei Province that predicts the NDVI of winter wheat at five prediction horizons in the future indicates that the DTW–LSTM model proposed here outperforms the LSTM model according to multiple evaluation indicators. The results of this study suggest that the DTW–LSTM model is highly promising for short and medium-term NDVI prediction.
Journal Article