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result(s) for
"Hardwicke, Tom E."
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Reducing bias, increasing transparency and calibrating confidence with preregistration
2023
Flexibility in the design, analysis and interpretation of scientific studies creates a multiplicity of possible research outcomes. Scientists are granted considerable latitude to selectively use and report the hypotheses, variables and analyses that create the most positive, coherent and attractive story while suppressing those that are negative or inconvenient. This creates a risk of bias that can lead to scientists fooling themselves and fooling others. Preregistration involves declaring a research plan (for example, hypotheses, design and statistical analyses) in a public registry before the research outcomes are known. Preregistration (1) reduces the risk of bias by encouraging outcome-independent decision-making and (2) increases transparency, enabling others to assess the risk of bias and calibrate their confidence in research outcomes. In this Perspective, we briefly review the historical evolution of preregistration in medicine, psychology and other domains, clarify its pragmatic functions, discuss relevant meta-research, and provide recommendations for scientists and journal editors.
Biased research is wasteful, undermines the credibility of science and prevents cumulative knowledge. Hardwicke and Wagenmakers explain how preregistration, when carefully and transparently used, can help to reduce bias.
Journal Article
How often do leading biomedical journals use statistical experts to evaluate statistical methods? The results of a survey
by
Hardwicke, Tom E.
,
Goodman, Steven N.
in
Biomedical research
,
Computer and Information Sciences
,
Editorials
2020
Scientific claims in biomedical research are typically derived from statistical analyses. However, misuse or misunderstanding of statistical procedures and results permeate the biomedical literature, affecting the validity of those claims. One approach journals have taken to address this issue is to enlist expert statistical reviewers. How many journals do this, how statistical review is incorporated, and how its value is perceived by editors is of interest. Here we report an expanded version of a survey conducted more than 20 years ago by Goodman and colleagues (1998) with the intention of characterizing contemporary statistical review policies at leading biomedical journals. We received eligible responses from 107 of 364 (28%) journals surveyed, across 57 fields, mostly from editors in chief. 34% (36/107) rarely or never use specialized statistical review, 34% (36/107) used it for 10-50% of their articles and 23% used it for all articles. These numbers have changed little since 1998 in spite of dramatically increased concern about research validity. The vast majority of editors regarded statistical review as having substantial incremental value beyond regular peer review and expressed comparatively little concern about the potential increase in reviewing time, cost, and difficulty identifying suitable statistical reviewers. Improved statistical education of researchers and different ways of employing statistical expertise are needed. Several proposals are discussed.
Journal Article
Badges to Acknowledge Open Practices: A Simple, Low-Cost, Effective Method for Increasing Transparency
by
Slowik, Agnieszka
,
Fiedler, Susann
,
Hardwicke, Tom E.
in
Bans
,
Behavior
,
Biology and Life Sciences
2016
Beginning January 2014, Psychological Science gave authors the opportunity to signal open data and materials if they qualified for badges that accompanied published articles. Before badges, less than 3% of Psychological Science articles reported open data. After badges, 23% reported open data, with an accelerating trend; 39% reported open data in the first half of 2015, an increase of more than an order of magnitude from baseline. There was no change over time in the low rates of data sharing among comparison journals. Moreover, reporting openness does not guarantee openness. When badges were earned, reportedly available data were more likely to be actually available, correct, usable, and complete than when badges were not earned. Open materials also increased to a weaker degree, and there was more variability among comparison journals. Badges are simple, effective signals to promote open practices and improve preservation of data and materials by using independent repositories.
Journal Article
Populating the Data Ark: An attempt to retrieve, preserve, and liberate data from the most highly-cited psychology and psychiatry articles
by
Ioannidis, John P. A.
,
Hardwicke, Tom E.
in
Analysis
,
Biology and Life Sciences
,
Computer and Information Sciences
2018
The vast majority of scientific articles published to-date have not been accompanied by concomitant publication of the underlying research data upon which they are based. This state of affairs precludes the routine re-use and re-analysis of research data, undermining the efficiency of the scientific enterprise, and compromising the credibility of claims that cannot be independently verified. It may be especially important to make data available for the most influential studies that have provided a foundation for subsequent research and theory development. Therefore, we launched an initiative-the Data Ark-to examine whether we could retrospectively enhance the preservation and accessibility of important scientific data. Here we report the outcome of our efforts to retrieve, preserve, and liberate data from 111 of the most highly-cited articles published in psychology and psychiatry between 2006-2011 (n = 48) and 2014-2016 (n = 63). Most data sets were not made available (76/111, 68%, 95% CI [60, 77]), some were only made available with restrictions (20/111, 18%, 95% CI [10, 27]), and few were made available in a completely unrestricted form (15/111, 14%, 95% CI [5, 22]). Where extant data sharing systems were in place, they usually (17/22, 77%, 95% CI [54, 91]) did not allow unrestricted access. Authors reported several barriers to data sharing, including issues related to data ownership and ethical concerns. The Data Ark initiative could help preserve and liberate important scientific data, surface barriers to data sharing, and advance community discussions on data stewardship.
Journal Article
An empirical appraisal of eLife’s assessment vocabulary
by
Schiavone, Sarah R.
,
Vazire, Simine
,
Clarke, Beth
in
Adult
,
Biology and Life Sciences
,
Communication
2024
Research articles published by the journal eLife are accompanied by short evaluation statements that use phrases from a prescribed vocabulary to evaluate research on 2 dimensions: importance and strength of support. Intuitively, the prescribed phrases appear to be highly synonymous (e.g., important/valuable, compelling/convincing) and the vocabulary’s ordinal structure may not be obvious to readers. We conducted an online repeated-measures experiment to gauge whether the phrases were interpreted as intended. We also tested an alternative vocabulary with (in our view) a less ambiguous structure. A total of 301 participants with a doctoral or graduate degree used a 0% to 100% scale to rate the importance and strength of support of hypothetical studies described using phrases from both vocabularies. For the eLife vocabulary, most participants’ implied ranking did not match the intended ranking on both the importance ( n = 59, 20% matched, 95% confidence interval [15% to 24%]) and strength of support dimensions ( n = 45, 15% matched [11% to 20%]). By contrast, for the alternative vocabulary, most participants’ implied ranking did match the intended ranking on both the importance ( n = 188, 62% matched [57% to 68%]) and strength of support dimensions ( n = 201, 67% matched [62% to 72%]). eLife’s vocabulary tended to produce less consistent between-person interpretations, though the alternative vocabulary still elicited some overlapping interpretations away from the middle of the scale. We speculate that explicit presentation of a vocabulary’s intended ordinal structure could improve interpretation. Overall, these findings suggest that more structured and less ambiguous language can improve communication of research evaluations.
Journal Article
Expanding the data Ark: an attempt to make the data from highly cited social science papers publicly available
by
Ioannidis, John P. A.
,
Dulitzki, Coby
,
Crane, Steven Michael
in
data transparency
,
Datasets
,
Information sharing
2024
Access to scientific data can enable independent reuse and verification; however, most data are not available and become increasingly irrecoverable over time. This study aimed to retrieve and preserve important datasets from 160 of the most highly-cited social science articles published between 2008–2013 and 2015–2018. We asked authors if they would share data in a public repository—the Data Ark—or provide reasons if data could not be shared. Of the 160 articles, data for 117 (73%, 95% CI [67%–80%]) were not available and data for 7 (4%, 95% CI [0%–12%]) were available with restrictions. Data for 36 (22%, 95% CI [16%–30%]) articles were available in unrestricted form: 29 of these datasets were already available and 7 datasets were made available in the Data Ark. Most authors did not respond to our data requests and a minority shared reasons for not sharing, such as legal or ethical constraints. These findings highlight an unresolved need to preserve important scientific datasets and increase their accessibility to the scientific community.
Journal Article
A Bayesian decision-making framework for replication
by
Tessler, Michael Henry
,
Peloquin, Benjamin N.
,
Hardwicke, Tom E.
in
Bayesian analysis
,
Credibility
,
Decision making
2018
Replication is the cornerstone of science – but when and why? Not all studies need replication, especially when resources are limited. We propose that a decision-making framework based on Bayesian philosophy of science provides a basis for choosing which studies to replicate.
Journal Article
Postretrieval new learning does not reliably induce human memory updating via reconsolidation
2016
Reconsolidation theory proposes that retrieval can destabilize an existing memory trace, opening a time-dependent window during which that trace is amenable to modification. Support for the theory is largely drawn from nonhuman animal studies that use invasive pharmacological or electroconvulsive interventions to disrupt a putative postretrieval restabilization (“reconsolidation”) process. In human reconsolidation studies, however, it is often claimed that postretrieval new learning can be used as a means of “updating” or “rewriting” existing memory traces. This proposal warrants close scrutiny because the ability to modify information stored in the memory system has profound theoretical, clinical, and ethical implications. The present study aimed to replicate and extend a prominent 3-day motor-sequence learning study [Walker MP, Brakefield T, Hobson JA, Stickgold R (2003) Nature 425(6958): 616–620] that is widely cited as a convincing demonstration of human reconsolidation. However, in four direct replication attempts (n = 64), we did not observe the critical impairment effect that has previously been taken to indicate disruption of an existing motor memory trace. In three additional conceptual replications (n = 48), we explored the broader validity of reconsolidation-updating theory by using a declarative recall task and sequences similar to phone numbers or computer passwords. Rather than inducing vulnerability to interference, memory retrieval appeared to aid the preservation of existing sequence knowledge relative to a no-retrieval control group. These findings suggest that memory retrieval followed by new learning does not reliably induce human memory updating via reconsolidation.
Journal Article
Mapping the universe of registered reports
2018
Registered reports present a substantial departure from traditional publishing models with the goal of enhancing the transparency and credibility of the scientific literature. We map the evolving universe of registered reports to assess their growth, implementation and shortcomings at journals across scientific disciplines.
Journal Article